Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d024523_T061
CDS Infomation	cds chromosome:B73_RefGen_v4:10:75995381:76002903:-1 gene:Zm00001d024523 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ramosa1 enhancer locus2 description:Ramosa 1 enhancer locus 2%3B Ramosa1 enhancer locus2
Sequence	ATGTCGTCTCTTAGCAGGGAGCTGGTTTTCCTCATCCTGCAGTTCCTCGACGAGGAGAAG TTCAAAGAGACGGTCCACAAGTTGGAGCAGGAGTCGGGCTTCTACTTCAACATGAAGCAC TTCGAGGACCTCGTGCAGGGCGGCGAGTGGGACGAGGTGGAGAAGTACCTCAGCGGCTTC ACCAAGGTGGAGGACAACCGCTACTCCATGAAGATCTTCTTTGAGATCCGCAAGCAAAAG TACCTCGAGGCCCTTGATAGGCATGACAGAGCCAAGGCTGTGGAGATTCTCGTGAAGGAT CTTAAGGTATTCGCCTCCTTCAATGAGGAGCTGTTCAAGGAGATAACGCAGCTGCTGACC TTGGAGAATTTCAGGCAAAATGAGCAGCTGTCCAAGTATGGGGACACAAAGTCAGCCCGG AATATCATGCTTTTGGAGCTCAAAAAGCTCATTGAAGCAAACCCTCTGTTCCGGGACAAG CTGAATTTCCCACCATTCAAAGCTTCCAGACTTCGCACATTGATCAATCAAAGTCTGAAC TGGCAACATCAGCTTTGCAAGAACCCCAGACCAAACCCTGACATCAAGACACTCTTCACT GATCACTCTTGTGCTGCTCCTACCAATGGAGCAAGAGCACCTCCACCTGCCAATGGTCCA CTTGGATCCATCCCTAAGTCAGCTGGATTTCCACCAATGGGTGCTCATGCTCCATTTCAA CCTGTGGTGTCGCCATCTCCAAACGCAATTGCAGGTTGGATGACAAATGCCAACCCCTCT TTGCCTCATGCTGCTGTTGCACAAGGGCCACCTGGTCTCGTTCAGGCTCCAAACACAGCG GCATTTCTAAAGCATCCTAGAACCCCTACAAGTGCACCTGGTATTGATTACCAATCTGCA GATTCAGAACATCTCATGAAAAGAATGCGGGTTGGACAACCAGATGAGGTATCTTTCTCT GGTGCAAGCCATCCTGCCAATATGTACACACAAGAAGACCTTCCCAAACAAGTTTCTCGT ACCCTTAATCAGGGTTCTAATGTTATGAGCCTGGATTTCCACCCCGTTCAACAAACCATT CTTTTAGTTGGAACAAATGTTGGTGACATTGCGGTGTGGGAAGTTGGTTCACGGGAAAGG ATAGCTCACAAGACTTTCAAAGTTTGGGATATTGGTTCCTGTACCTTGCCTTTGCAGGCT TCGCTGATGAAAGATGCTGCAGTATCTGTCAATAGATGTCTGTGGAGCCCTGATGGAACT ATTCTAGGTGTTGCTTTCTCGAAGCATATTGTTCAGACATATACTTTTGTACCTAATGGA GATTTACGGCAGCAAGCAGAGATTGACGCACACATCGGTGGGGTTAATGATATAGCCTTC TCTCACCCTAATAAAACTCTATCTATCATCACATGTGGTGATGATAAACTCATCAAGGTG TGGGATGCTCAAACAGGACAGAAGCAGTACACATTTGAAGGACATGAAGCTCCTGTGTAT TCTGTATGCCCTCACTACAAGGAGTCCATTCAGTTTATCTTCTCTACTGCCATTGATGGA AAAATCAAGGCATGGTTGTATGATTGCTTGGGCTCAAGAGTTGACTATGATGCTCCTGGA CATTGGTGTACTACCATGGCTTACAGTGCTGATGGGACAAGATTATTCTCTTGTGGTACT AGTAAAGAAGGTGATTCACACTTGGTTGAGTGGAATGAAACTGAAGGGGCAATTAAGAGG ACATACAATGGCTTCAGGAAACGTTCACTCGGTGTTGTTCAGTTTGACACAACTAGGAAT CGCTTCTTGGCTGCTGGAGATGAATTTCTTGTTAAATTCTGGGATATGGATAACAATAAC ATACTAACAACAACAGACTGTGACGGTGGACTGCCAGCAAGCCCTCGTTTGAGATTCAAT AGAGAAGGTTCATTACTTGCAGTTACCACAAGTGATAATGGAATAAAAATACTTGCCAAC ACTGATGGACAACGCTTGCTTAGGATGCTTGAGAGTAGAGCATTTGAGGGCTCTAGAGGA CCTCCTCAACAAATAAACACCAAGCCTCCAATTGTCGCCCTTGGTCCTGTTTCAAATGTC AGCAGTCCTATAGCAGTAAATGCCGAGCGACCTGATCGGATCTTGCCTGCAGTGTCGACA AGTGGCTTGGCACCTATGGATGCTAGCAGAACTCCAGATGTTAAGCCAAGAATAACAGAT GAATCCGAAAAGGTCAAAACCTGGAAGTTGGCTGACATTGTTGATAATGGACATCTTCGA GCTCTGCATTTGACAGACACAGACACTAATCCAAGCAAAATTGTCCGTTTGTTATATACA AATAATGGGGTTGCACTCTTGGCTCTTGGCTCCAATGCTGTTCATAAGTTGTGGAAATGG CAACGGAGCGACAGAAATCCTAGCGGCAAGTCTACTGCATCTGTTGCACCTCACCTGTGG CAACCTGCAAATGGGATTCTGATGACAAATGACACGAATGATGGCAACCCAGAAGAAGCA ACCGCCTGCATTGCATTGTCCAAAAATGACTCCTATGTTATGTCTGCATCTGGTGGCAAA GTCTCGTTGTTCAATATGATGACATTTAAGGTCATGACTACTTTCATGGCACCTCCACCT GCTGCAACTTTCCTTGCATTCCACCCACAAGATAATAATATCATCGCCATTGGAATGGAG GACTCTACCATCCAAATCTACAATGTCCGCATTGATGATGTCAAAAGTAAGCTCAAGGGA CATCAGAAGAAGATTACGGGGCTGGCCTTTTCTCAATCAATGAATGTGCTAGTATCATCA GGTGCTGATGCTCAGCTATGTGTGTGGAGTATTGATGGCTGGGAAAAAAAGAAATCAAGA TATATCCAACCCCCAGCAAACCGACCTGGCACTTTGGTTGGTGACACAAGGGTGCAGTTT

Peptide Sequence

PEP ID	Zm00001d024523_P061
PEP Infomation	pep chromosome:B73_RefGen_v4:10:75995381:76002903:-1 gene:Zm00001d024523 transcript:Zm00001d024523_T061 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ramosa1 enhancer locus2 description:Ramosa 1 enhancer locus 2%3B Ramosa1 enhancer locus2
Sequence	MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFYFNMKHFEDLVQGGEWDEVEKYLSGF TKVEDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFASFNEELFKEITQLLT LENFRQNEQLSKYGDTKSARNIMLLELKKLIEANPLFRDKLNFPPFKASRLRTLINQSLN WQHQLCKNPRPNPDIKTLFTDHSCAAPTNGARAPPPANGPLGSIPKSAGFPPMGAHAPFQ PVVSPSPNAIAGWMTNANPSLPHAAVAQGPPGLVQAPNTAAFLKHPRTPTSAPGIDYQSA DSEHLMKRMRVGQPDEVSFSGASHPANMYTQEDLPKQVSRTLNQGSNVMSLDFHPVQQTI LLVGTNVGDIAVWEVGSRERIAHKTFKVWDIGSCTLPLQASLMKDAAVSVNRCLWSPDGT ILGVAFSKHIVQTYTFVPNGDLRQQAEIDAHIGGVNDIAFSHPNKTLSIITCGDDKLIKV WDAQTGQKQYTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDCLGSRVDYDAPG HWCTTMAYSADGTRLFSCGTSKEGDSHLVEWNETEGAIKRTYNGFRKRSLGVVQFDTTRN RFLAAGDEFLVKFWDMDNNNILTTTDCDGGLPASPRLRFNREGSLLAVTTSDNGIKILAN TDGQRLLRMLESRAFEGSRGPPQQINTKPPIVALGPVSNVSSPIAVNAERPDRILPAVST SGLAPMDASRTPDVKPRITDESEKVKTWKLADIVDNGHLRALHLTDTDTNPSKIVRLLYT NNGVALLALGSNAVHKLWKWQRSDRNPSGKSTASVAPHLWQPANGILMTNDTNDGNPEEA TACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQDNNIIAIGME DSTIQIYNVRIDDVKSKLKGHQKKITGLAFSQSMNVLVSSGADAQLCVWSIDGWEKKKSR YIQPPANRPGTLVGDTRVQF

Transcript Sequence

Transcript ID	Zm00001d024523_T061
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:75995381:76002903:-1 gene:Zm00001d024523 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ramosa1 enhancer locus2 description:Ramosa 1 enhancer locus 2%3B Ramosa1 enhancer locus2
Sequence	GAGAAAACAGAGAGCGAGAGAAGTTCTCGGAGAGAGAAACTAAGCGAGCGAGATAAAAGA AGCGAAACGCGGGCAGCTGTTGCTGAGGCGTGGAGACGGAGGCGGCGGCGCGGCCGAACC CTAGCCGACGGCGGCGCGTTTGAGGCGGGACCCTCTGCAGGCGACGCCTGGCGGCCGGAT TCGAGCTGCCGGCGTCGGCAGCTTCAGATCGGCGGTCGCGCCGACGGAATCGGCGGGGAT CCCGGCGGGATGGGCGCGGCGAGGCCCGTGCTCTGGTCGTGAGTTTGCTTGGTTCGTGGG TTCTGGCTCTGGGCTCCCGAGCAAGGTTTTGAGCTCGGTGTAGCCGCTTGCTTGCTGAGT TGCTGCTGTCGCTTTTTGGGCGGTTTGAAGCGGGTTTTTGCGGGGGGTTTGGGAGGGATC TGCCGGGAAGGCCCGAGGTTTAGGCCGGTTTTTGAGAGCTGGAGGCTCCGGCCGGGATCG GGGGAGCCATGTCGTCTCTTAGCAGGGAGCTGGTTTTCCTCATCCTGCAGTTCCTCGACG AGGAGAAGTTCAAAGAGACGGTCCACAAGTTGGAGCAGGAGTCGGGCTTCTACTTCAACA TGAAGCACTTCGAGGACCTCGTGCAGGGCGGCGAGTGGGACGAGGTGGAGAAGTACCTCA GCGGCTTCACCAAGGTGGAGGACAACCGCTACTCCATGAAGATCTTCTTTGAGATCCGCA AGCAAAAGTACCTCGAGGCCCTTGATAGGCATGACAGAGCCAAGGCTGTGGAGATTCTCG TGAAGGATCTTAAGGTATTCGCCTCCTTCAATGAGGAGCTGTTCAAGGAGATAACGCAGC TGCTGACCTTGGAGAATTTCAGGCAAAATGAGCAGCTGTCCAAGTATGGGGACACAAAGT CAGCCCGGAATATCATGCTTTTGGAGCTCAAAAAGCTCATTGAAGCAAACCCTCTGTTCC GGGACAAGCTGAATTTCCCACCATTCAAAGCTTCCAGACTTCGCACATTGATCAATCAAA GTCTGAACTGGCAACATCAGCTTTGCAAGAACCCCAGACCAAACCCTGACATCAAGACAC TCTTCACTGATCACTCTTGTGCTGCTCCTACCAATGGAGCAAGAGCACCTCCACCTGCCA ATGGTCCACTTGGATCCATCCCTAAGTCAGCTGGATTTCCACCAATGGGTGCTCATGCTC CATTTCAACCTGTGGTGTCGCCATCTCCAAACGCAATTGCAGGTTGGATGACAAATGCCA ACCCCTCTTTGCCTCATGCTGCTGTTGCACAAGGGCCACCTGGTCTCGTTCAGGCTCCAA ACACAGCGGCATTTCTAAAGCATCCTAGAACCCCTACAAGTGCACCTGGTATTGATTACC AATCTGCAGATTCAGAACATCTCATGAAAAGAATGCGGGTTGGACAACCAGATGAGGTAT CTTTCTCTGGTGCAAGCCATCCTGCCAATATGTACACACAAGAAGACCTTCCCAAACAAG TTTCTCGTACCCTTAATCAGGGTTCTAATGTTATGAGCCTGGATTTCCACCCCGTTCAAC AAACCATTCTTTTAGTTGGAACAAATGTTGGTGACATTGCGGTGTGGGAAGTTGGTTCAC GGGAAAGGATAGCTCACAAGACTTTCAAAGTTTGGGATATTGGTTCCTGTACCTTGCCTT TGCAGGCTTCGCTGATGAAAGATGCTGCAGTATCTGTCAATAGATGTCTGTGGAGCCCTG ATGGAACTATTCTAGGTGTTGCTTTCTCGAAGCATATTGTTCAGACATATACTTTTGTAC CTAATGGAGATTTACGGCAGCAAGCAGAGATTGACGCACACATCGGTGGGGTTAATGATA TAGCCTTCTCTCACCCTAATAAAACTCTATCTATCATCACATGTGGTGATGATAAACTCA TCAAGGTGTGGGATGCTCAAACAGGACAGAAGCAGTACACATTTGAAGGACATGAAGCTC CTGTGTATTCTGTATGCCCTCACTACAAGGAGTCCATTCAGTTTATCTTCTCTACTGCCA TTGATGGAAAAATCAAGGCATGGTTGTATGATTGCTTGGGCTCAAGAGTTGACTATGATG CTCCTGGACATTGGTGTACTACCATGGCTTACAGTGCTGATGGGACAAGATTATTCTCTT GTGGTACTAGTAAAGAAGGTGATTCACACTTGGTTGAGTGGAATGAAACTGAAGGGGCAA TTAAGAGGACATACAATGGCTTCAGGAAACGTTCACTCGGTGTTGTTCAGTTTGACACAA CTAGGAATCGCTTCTTGGCTGCTGGAGATGAATTTCTTGTTAAATTCTGGGATATGGATA ACAATAACATACTAACAACAACAGACTGTGACGGTGGACTGCCAGCAAGCCCTCGTTTGA GATTCAATAGAGAAGGTTCATTACTTGCAGTTACCACAAGTGATAATGGAATAAAAATAC TTGCCAACACTGATGGACAACGCTTGCTTAGGATGCTTGAGAGTAGAGCATTTGAGGGCT CTAGAGGACCTCCTCAACAAATAAACACCAAGCCTCCAATTGTCGCCCTTGGTCCTGTTT CAAATGTCAGCAGTCCTATAGCAGTAAATGCCGAGCGACCTGATCGGATCTTGCCTGCAG TGTCGACAAGTGGCTTGGCACCTATGGATGCTAGCAGAACTCCAGATGTTAAGCCAAGAA TAACAGATGAATCCGAAAAGGTCAAAACCTGGAAGTTGGCTGACATTGTTGATAATGGAC ATCTTCGAGCTCTGCATTTGACAGACACAGACACTAATCCAAGCAAAATTGTCCGTTTGT TATATACAAATAATGGGGTTGCACTCTTGGCTCTTGGCTCCAATGCTGTTCATAAGTTGT GGAAATGGCAACGGAGCGACAGAAATCCTAGCGGCAAGTCTACTGCATCTGTTGCACCTC ACCTGTGGCAACCTGCAAATGGGATTCTGATGACAAATGACACGAATGATGGCAACCCAG AAGAAGCAACCGCCTGCATTGCATTGTCCAAAAATGACTCCTATGTTATGTCTGCATCTG GTGGCAAAGTCTCGTTGTTCAATATGATGACATTTAAGGTCATGACTACTTTCATGGCAC CTCCACCTGCTGCAACTTTCCTTGCATTCCACCCACAAGATAATAATATCATCGCCATTG GAATGGAGGACTCTACCATCCAAATCTACAATGTCCGCATTGATGATGTCAAAAGTAAGC TCAAGGGACATCAGAAGAAGATTACGGGGCTGGCCTTTTCTCAATCAATGAATGTGCTAG TATCATCAGGTGCTGATGCTCAGCTATGTGTGTGGAGTATTGATGGCTGGGAAAAAAAGA AATCAAGATATATCCAACCCCCAGCAAACCGACCTGGCACTTTGGTTGGTGACACAAGGG TGCAGTTT