Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d024516_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:10:75581088:75584676:-1 gene:Zm00001d024516 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyamine transporter RMV1
Sequence

ATGGGGGATCGTGTTGGTGTCAAGTACAACAGCATCAATGAGGCTGAAGAGCATAAGGGA
GGGCATGGCATCCCCAAGGTTTCCATGATACCCCTCATATTCCTCATATTTTATGAAGTT
TCAGGGGGTCCCTTTGGGATTGAGGATAGTGTCAAGGCTGCTGGGCCACTACTGGCAATT
TTGGGCTTTCTTCTGTTTGCACTCATATGGAGCGTTCCAGAAGCTCTAATCACTGCTGAG
ATGGGCACTATGTTCCCCGAGAATGGTGGTTATGTTGTCTGGGTTTCTTCAGCTCTTGGT
CCGTTCTGGGGTTTTCAGCAAGGTTGGGCAAAGTGGCTCAGCGGTGTCATAGATAATGCC
CTCTATCCAGTCCTATTTCTGGACTATGTCAAGTCCAGTGTTCCAGCTCTTGGAGGTGGG
CTCCCAAGGACCTTAGCGGTGCTTATCCTCACAGTTGCGCTTACATACATGAACTACAGA
GGGCTGACTATAGTTGGCTGGGTGGCAGTCTTTCTTGGGGTGTTCTCTCTTCTCCCGTTC
TTTGTGATGGGATTGATAGCTATTCCACAGATTGAACCTTCTAGGTGGCTTGAAATGGAC
TTGGGGAGTGTGGATTGGGGATTGTATCTGAATACACTATTTTGGAACCTCAACTATTGG
GATTCAATCAGCACATTGGCTGGTGAAGTCGAGAATCCAAAGAGAACCCTACCAAGAGCG
CTTTCTTATGCTCTAGTTCTAGTGGTGGGAGGATACCTCTACCCATTAATCACTTGCACA
GCAGCAGTTCCAATCGTTAGGGAGCACTGGTCAGATGGGTATTTTTCAGACATCGCAAGA
ATTCTCGGTGGCATTTGGTTGCACTCATGGATTCAAGCAGCAGCTGCTTTATCCAACATG
GGCAATTTTCTCACTGAAATGAGCAGCGATTCTTACCAGCTTCTTGGGATGGCTGAGCGA
GGCATGCTCCCTGACTTTTTTGCCAAGAGATCTCACTATGGAACCCCGCTTATTGGCATC
CTGTTCTCTGCCTTCGGTGTGATCCTACTGTCCTGGATGAGCTTCCAGGAGATCATCGCT
GCCGAGAACTACCTCTACTGCTTCGGCATGATCCTGGAGTTCATTGCCTTCATCAAGCTG
CGGGTGTACCATCCGAACGCCTCTCGGCCCTACAAGATCCCTTTGGGCACCATTGGTGCT
ATCCTTATGATCATCCCACCTGGTCTCTTGATCATTGTGGTGATGGCACTCGCGTCCTAC
AAGGTGATGGTGGTGAGCATCCTAGCGATGGTCTTCGGATTCGTGCTGCAGCCGTGTTTG
GTGTACGTGGAGAAGAAGCGGTGGTTAAGGTTCTCCATCAGTGCAGACCTGCCCGATTTG
CCTGATGTGCAGGAAATTGCTGAAGATGATGCTGTCCCACTCGTGGTCTAA

Peptide Sequence

PEP ID

Zm00001d024516_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:10:75581088:75584676:-1 gene:Zm00001d024516 transcript:Zm00001d024516_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyamine transporter RMV1
Sequence

MGDRVGVKYNSINEAEEHKGGHGIPKVSMIPLIFLIFYEVSGGPFGIEDSVKAAGPLLAI
LGFLLFALIWSVPEALITAEMGTMFPENGGYVVWVSSALGPFWGFQQGWAKWLSGVIDNA
LYPVLFLDYVKSSVPALGGGLPRTLAVLILTVALTYMNYRGLTIVGWVAVFLGVFSLLPF
FVMGLIAIPQIEPSRWLEMDLGSVDWGLYLNTLFWNLNYWDSISTLAGEVENPKRTLPRA
LSYALVLVVGGYLYPLITCTAAVPIVREHWSDGYFSDIARILGGIWLHSWIQAAAALSNM
GNFLTEMSSDSYQLLGMAERGMLPDFFAKRSHYGTPLIGILFSAFGVILLSWMSFQEIIA
AENYLYCFGMILEFIAFIKLRVYHPNASRPYKIPLGTIGAILMIIPPGLLIIVVMALASY
KVMVVSILAMVFGFVLQPCLVYVEKKRWLRFSISADLPDLPDVQEIAEDDAVPLVV

Transcript Sequence

Transcript ID

Zm00001d024516_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:75581088:75584676:-1 gene:Zm00001d024516 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyamine transporter RMV1
Sequence

AGGATATTCCTTCTTCTTCACCCACGACTCCGCCTTCCTAGTTCTTGGGCGGCCGGTGAG
GACGAACACGGACTCGCGCTCTCGCTCGCGCCATCGGAGGAAAGGAGATCCACTCGGAGC
ATGCGGGCCGCCGCGCGGTAGATGGTGAGCGCTCTTGGTTTTCCCCCCCTTCTGATTCTG
CTCTGCAGATATGGGGTCATTCATTGGGGTTCCCCGCTGGCCCGCTCCGTCATGCCACTT
CTCACGCTTGGAGGACTGCCTTCCTTCCTCGATGGCGTGACGGCTCAGGGCTACAGATCA
CTGCTCCCTCTCCACCTACGGCGCTAAGCCCAAACCCCGATCGACCCGCTTCGTCAAAAC
CCACGCCGTTTTCCCCTCATCGATCTCCTCGCTGGGACCCAATTCCACTTCCAACCGGCC
GTCTCCTACCAGTACCGCCTGCGCCTCCCTGGACCCGTTCCGTCTGATTCCCCACCGCTG
CTTCGTCGTCAACATACTTCTCAGCCAATAGGTGCACATCTTCCTACTTCGATGCGAATC
CTACTCTGGATTCAAGTCAGGTCCAGTTTGAAAGTGACAAGAAGCTGCTCTAGTTCCACG
CATCTTCGCCGCCCCATCATTGCCACCCGCAAGCGGCAAGCCCAACGGTTTCCAACCCAA
CCGGAGTGATCAATCCTTCTACTCTACTCTACTCAGTGGAGTAGTATAAAACTGAGGAAC
ACGGCAATAACACGAGCAAATTCAGCTTGTCTTCCAATGGGGGATCGTGTTGGTGTCAAG
TACAACAGCATCAATGAGGCTGAAGAGCATAAGGGAGGGCATGGCATCCCCAAGGTTTCC
ATGATACCCCTCATATTCCTCATATTTTATGAAGTTTCAGGGGGTCCCTTTGGGATTGAG
GATAGTGTCAAGGCTGCTGGGCCACTACTGGCAATTTTGGGCTTTCTTCTGTTTGCACTC
ATATGGAGCGTTCCAGAAGCTCTAATCACTGCTGAGATGGGCACTATGTTCCCCGAGAAT
GGTGGTTATGTTGTCTGGGTTTCTTCAGCTCTTGGTCCGTTCTGGGGTTTTCAGCAAGGT
TGGGCAAAGTGGCTCAGCGGTGTCATAGATAATGCCCTCTATCCAGTCCTATTTCTGGAC
TATGTCAAGTCCAGTGTTCCAGCTCTTGGAGGTGGGCTCCCAAGGACCTTAGCGGTGCTT
ATCCTCACAGTTGCGCTTACATACATGAACTACAGAGGGCTGACTATAGTTGGCTGGGTG
GCAGTCTTTCTTGGGGTGTTCTCTCTTCTCCCGTTCTTTGTGATGGGATTGATAGCTATT
CCACAGATTGAACCTTCTAGGTGGCTTGAAATGGACTTGGGGAGTGTGGATTGGGGATTG
TATCTGAATACACTATTTTGGAACCTCAACTATTGGGATTCAATCAGCACATTGGCTGGT
GAAGTCGAGAATCCAAAGAGAACCCTACCAAGAGCGCTTTCTTATGCTCTAGTTCTAGTG
GTGGGAGGATACCTCTACCCATTAATCACTTGCACAGCAGCAGTTCCAATCGTTAGGGAG
CACTGGTCAGATGGGTATTTTTCAGACATCGCAAGAATTCTCGGTGGCATTTGGTTGCAC
TCATGGATTCAAGCAGCAGCTGCTTTATCCAACATGGGCAATTTTCTCACTGAAATGAGC
AGCGATTCTTACCAGCTTCTTGGGATGGCTGAGCGAGGCATGCTCCCTGACTTTTTTGCC
AAGAGATCTCACTATGGAACCCCGCTTATTGGCATCCTGTTCTCTGCCTTCGGTGTGATC
CTACTGTCCTGGATGAGCTTCCAGGAGATCATCGCTGCCGAGAACTACCTCTACTGCTTC
GGCATGATCCTGGAGTTCATTGCCTTCATCAAGCTGCGGGTGTACCATCCGAACGCCTCT
CGGCCCTACAAGATCCCTTTGGGCACCATTGGTGCTATCCTTATGATCATCCCACCTGGT
CTCTTGATCATTGTGGTGATGGCACTCGCGTCCTACAAGGTGATGGTGGTGAGCATCCTA
GCGATGGTCTTCGGATTCGTGCTGCAGCCGTGTTTGGTGTACGTGGAGAAGAAGCGGTGG
TTAAGGTTCTCCATCAGTGCAGACCTGCCCGATTTGCCTGATGTGCAGGAAATTGCTGAA
GATGATGCTGTCCCACTCGTGGTCTAATATTCGGCCATTGTGCTCTGGAGGTGTTGTTCC
CAATCGAGACATCCTAGGATGGAATGTGACACACTGGGATTCACGACCTTGTATCTCCTG
AATGAGTTCCAAAGCCAGAGGTCTTAGACATCTTGTATAAGGACACATTATGTTTTCACC
GTGCTATTGAACATCATGATGGCATCATGCATCAAACAGAAATGTAAGCCCCAGACAGTG
TTCATCAAAGGAGATCCTCCAGATTATCAAATACATGTTGCATCTGCTGTCAGCTGTCGC
TTAACTTGTCTATATACTAGGGTCGATCCATGACATGACATGAGGTTACTCATCTGGGAT
CGCCTTAAAATGGGTGAACGTTAACTCTTGATAAGAGGCAGTAGAGGTTCTCGACCTGCA
GATTGTAACCTGGTTTCCATTGCATAAACTGTTATCAGTAATTCCATCTTTTGCGTACAG
TTTTGTG