Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d024512_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:10:75069699:75075183:-1 gene:Zm00001d024512 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:copalyl diphosphate synthase3 description: copalyl diphosphate synthase3
Sequence	ATGGATCTGCCGCGACCCCAGGCTCCCTGTTGTCGGCGCCCTGCAGACCTACGTCCTGCC CCCTGCTGCATCGATGCGCCCAGGCCCAGCGACCTGCGCGGCTGCGCCCCGGCAGCCGGC GCCCTATGGAAACCCTCCGCTTCGTATCCCCGTGCTGCCGTGCCGCCAGCCTCCGTGAGG CTCCACGACATCAGTGTCCGCGGAGAGGAGGATGAGCAGAAAGAGATGCTGCAGCAAATG ACTGACGGAGTCAGAGCAATGCTGGGCTCAATAGGTGACGGTGCGATCAACATTTCTGCC TACGACACCGCATGGGTTGCCCTTGTTAAGAGCCTGGAAGGTGGCAATGGCCCTCAGTTT CCCTCCAGCCTTAGATGGATCGTTGAGAACCAACTACCAGATGGCTCGTGGGGCGACGAG GAGTTCTTCCTGGTCTATGACCGCATGATCAACACTCTGGCCTGTGTGATTGCACTTGAG TCGTGGGAAATCCATGCTGACATGTGCGAGAAAGGTTTGTCATTCATTCGAGAGAATTTG TGGAGGCTAGAGCACAGTGGTTCAGATGACTGGATGGTCGTTAGTTTCGAGATAACCTTC CCCCAGCTGCTGGAGATGGCAAGAGACTTGGGTCTCGACGTGCCCTGCGACGAGCCATCC CTGCGAGCTATCTATGCAAGGAGAGACGCAAAGCTCGCAAGAATCCCTAAAGAATTACTG CACGCTTCACCGACAACTCTGCTTCTGAGCATAGAGGGAATGCCGGGCTTAGACTGGGAG AGACTACTGAAACTCCAGTGCTCCGATGGTTCGTTCATGTCATCGCCTGCACCCACAGCC TACGCTCTCATGCAGACCGGCGACACGAAATGCCTCGAGTTCCTCAATGGAATCGTCAGC AAGTTTAGCGGGGGAGTGCCCTTTACCTACCCTGTGGATCTGTTCGAGCACTTATGGGTA GTGGACAGGATAGAGCGGCTGGGCATAGGGAGGCACTTCACAGGTGAAATCAAGGAGTGC CTAGAATACGTACACAGGTACTGGGGCGACGAAGGCTTGCCCGCCACGAGGGACGGTCCG GTCTCAGATGTCGATGACACGGCCATGGGGTTCCGTCTTCTCCGACTGCATGGCTACGAT GTCTCTCCTTCTGTGTTTAAGCACTTCGAGCAGGACGGGGCGTTCTACTGCTACCCAGGG CAGTCGAACAAATCCGTGACTGCTATGTACAACCTCTACCGCGCTTCTCAGGTGGCCTTT CCAGGCGAGGATGAGCTCCGACGCGCTGAGGCATACAGCCGTGAGTTCCTCTGCCGCAGA CGAGCCTCCGGGGAGCTCAAAGACAAGTGGGTCATCCCCAAGGACTTGCCTGGCGAGGTC GCTTACGCACTGGACGTGCCGTGGAAAGCTAGCCTGCCGCGCATCGAGACGAGGATGTAT CTGGAGCAGTACGGTGGTGCCGATGACGTGTGGATTGGGAAGGTCCTGTACAGGATGTCT CTCGTCAACAACGAGCTCCTCCTCCGGACAGCTCAAGCCGACTTCAGAAGTTTCCAGAGA CAATGCAAGCTCGAGTGGCATGGCCTCAGAAAATGGGCCAGCAGGAGAAACCTCCAAGCA TACGGCGTGACGTCGAACAGCACGCTGCGATCCTACTTCTTAGCCGCAGCCAGCATCTTT GAGCCAGACAGAGCGACAGAGCGTCTGGGATGGGCTCGCACGGCGGTGCTCGCCGAGGCC GTCTCCTCCTGCCTCCGAGACGGTCGTTGTAGCCGTGCCGACGGCATGCTGAGGGAACTG ACCAGCGGCATCCACCTACGCAACGACGATAATCCGGCAGCCAGCTTGGTGCATGCTCTC CATGAGCTCATTGGCCTCCTTGCATTCGACAATGCTTCCTACAACAGCCTTCTTGATGCC TGGAAGCAATGGCTCGCCATGTGGACCGCCCAGGGACACGAAGGGAGCGTAGCGCTGCTG CTGGTTCGCACAGTGGAGATATGCTCCGGCCGGAGGCGTAGCGCCTCTGCCACCGACGAT GGCCAAGCACACAGCCTCTCCGAGTACTCCCAGCTCGAGCAGCTCACGTCCTCGGTATGC AGCAAGCTTGCTGCAGCAGGCACCGGAGATGGAGACGACCTTTCCCCGGCAAGTGTGGAG GACGCAGCAGATCGCCACCGTGTGGATCTGGAGATGCAGACGTTGGCTCGGTGCGTTCTC CGGAGCCGCAGCAGTATCGACGCAGTGACCAGGCAGACGTTTCTCCATGTCGCGAGGAGC TTCTATTACGTCGCTCATTGCTCAGCTCGAACGGTTGATGCCCACATCTCCAAGGTCTTG TTCGAGGATGTCGTGTAG

Peptide Sequence

PEP ID	Zm00001d024512_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:10:75069699:75075183:-1 gene:Zm00001d024512 transcript:Zm00001d024512_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:copalyl diphosphate synthase3 description: copalyl diphosphate synthase3
Sequence	MDLPRPQAPCCRRPADLRPAPCCIDAPRPSDLRGCAPAAGALWKPSASYPRAAVPPASVR LHDISVRGEEDEQKEMLQQMTDGVRAMLGSIGDGAINISAYDTAWVALVKSLEGGNGPQF PSSLRWIVENQLPDGSWGDEEFFLVYDRMINTLACVIALESWEIHADMCEKGLSFIRENL WRLEHSGSDDWMVVSFEITFPQLLEMARDLGLDVPCDEPSLRAIYARRDAKLARIPKELL HASPTTLLLSIEGMPGLDWERLLKLQCSDGSFMSSPAPTAYALMQTGDTKCLEFLNGIVS KFSGGVPFTYPVDLFEHLWVVDRIERLGIGRHFTGEIKECLEYVHRYWGDEGLPATRDGP VSDVDDTAMGFRLLRLHGYDVSPSVFKHFEQDGAFYCYPGQSNKSVTAMYNLYRASQVAF PGEDELRRAEAYSREFLCRRRASGELKDKWVIPKDLPGEVAYALDVPWKASLPRIETRMY LEQYGGADDVWIGKVLYRMSLVNNELLLRTAQADFRSFQRQCKLEWHGLRKWASRRNLQA YGVTSNSTLRSYFLAAASIFEPDRATERLGWARTAVLAEAVSSCLRDGRCSRADGMLREL TSGIHLRNDDNPAASLVHALHELIGLLAFDNASYNSLLDAWKQWLAMWTAQGHEGSVALL LVRTVEICSGRRRSASATDDGQAHSLSEYSQLEQLTSSVCSKLAAAGTGDGDDLSPASVE DAADRHRVDLEMQTLARCVLRSRSSIDAVTRQTFLHVARSFYYVAHCSARTVDAHISKVL FEDVV

Transcript Sequence

Transcript ID	Zm00001d024512_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:75069699:75075183:-1 gene:Zm00001d024512 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:copalyl diphosphate synthase3 description: copalyl diphosphate synthase3
Sequence	AGTCCAGCCCAGCTGGTGCCGTTCGCTTGGTGCTTCCTCCCTCAGCGCCGTTGTCCTTTG ACCCGGCGCGGCGGTGCCCAACCTCGCTGCTCGTCCGACGCCCGTACGTCGCCCTTCGCG TCCTCCCTCCTTACTCCCTCGCCAAGTCGCCCGACGATGGATCTGCCGCGACCCCAGGCT CCCTGTTGTCGGCGCCCTGCAGACCTACGTCCTGCCCCCTGCTGCATCGATGCGCCCAGG CCCAGCGACCTGCGCGGCTGCGCCCCGGCAGCCGGCGCCCTATGGAAACCCTCCGCTTCG TATCCCCGTGCTGCCGTGCCGCCAGCCTCCGTGAGGCTCCACGACATCAGTGTCCGCGGA GAGGAGGATGAGCAGAAAGAGATGCTGCAGCAAATGACTGACGGAGTCAGAGCAATGCTG GGCTCAATAGGTGACGGTGCGATCAACATTTCTGCCTACGACACCGCATGGGTTGCCCTT GTTAAGAGCCTGGAAGGTGGCAATGGCCCTCAGTTTCCCTCCAGCCTTAGATGGATCGTT GAGAACCAACTACCAGATGGCTCGTGGGGCGACGAGGAGTTCTTCCTGGTCTATGACCGC ATGATCAACACTCTGGCCTGTGTGATTGCACTTGAGTCGTGGGAAATCCATGCTGACATG TGCGAGAAAGGTTTGTCATTCATTCGAGAGAATTTGTGGAGGCTAGAGCACAGTGGTTCA GATGACTGGATGGTCGTTAGTTTCGAGATAACCTTCCCCCAGCTGCTGGAGATGGCAAGA GACTTGGGTCTCGACGTGCCCTGCGACGAGCCATCCCTGCGAGCTATCTATGCAAGGAGA GACGCAAAGCTCGCAAGAATCCCTAAAGAATTACTGCACGCTTCACCGACAACTCTGCTT CTGAGCATAGAGGGAATGCCGGGCTTAGACTGGGAGAGACTACTGAAACTCCAGTGCTCC GATGGTTCGTTCATGTCATCGCCTGCACCCACAGCCTACGCTCTCATGCAGACCGGCGAC ACGAAATGCCTCGAGTTCCTCAATGGAATCGTCAGCAAGTTTAGCGGGGGAGTGCCCTTT ACCTACCCTGTGGATCTGTTCGAGCACTTATGGGTAGTGGACAGGATAGAGCGGCTGGGC ATAGGGAGGCACTTCACAGGTGAAATCAAGGAGTGCCTAGAATACGTACACAGGTACTGG GGCGACGAAGGCTTGCCCGCCACGAGGGACGGTCCGGTCTCAGATGTCGATGACACGGCC ATGGGGTTCCGTCTTCTCCGACTGCATGGCTACGATGTCTCTCCTTCTGTGTTTAAGCAC TTCGAGCAGGACGGGGCGTTCTACTGCTACCCAGGGCAGTCGAACAAATCCGTGACTGCT ATGTACAACCTCTACCGCGCTTCTCAGGTGGCCTTTCCAGGCGAGGATGAGCTCCGACGC GCTGAGGCATACAGCCGTGAGTTCCTCTGCCGCAGACGAGCCTCCGGGGAGCTCAAAGAC AAGTGGGTCATCCCCAAGGACTTGCCTGGCGAGGTCGCTTACGCACTGGACGTGCCGTGG AAAGCTAGCCTGCCGCGCATCGAGACGAGGATGTATCTGGAGCAGTACGGTGGTGCCGAT GACGTGTGGATTGGGAAGGTCCTGTACAGGATGTCTCTCGTCAACAACGAGCTCCTCCTC CGGACAGCTCAAGCCGACTTCAGAAGTTTCCAGAGACAATGCAAGCTCGAGTGGCATGGC CTCAGAAAATGGGCCAGCAGGAGAAACCTCCAAGCATACGGCGTGACGTCGAACAGCACG CTGCGATCCTACTTCTTAGCCGCAGCCAGCATCTTTGAGCCAGACAGAGCGACAGAGCGT CTGGGATGGGCTCGCACGGCGGTGCTCGCCGAGGCCGTCTCCTCCTGCCTCCGAGACGGT CGTTGTAGCCGTGCCGACGGCATGCTGAGGGAACTGACCAGCGGCATCCACCTACGCAAC GACGATAATCCGGCAGCCAGCTTGGTGCATGCTCTCCATGAGCTCATTGGCCTCCTTGCA TTCGACAATGCTTCCTACAACAGCCTTCTTGATGCCTGGAAGCAATGGCTCGCCATGTGG ACCGCCCAGGGACACGAAGGGAGCGTAGCGCTGCTGCTGGTTCGCACAGTGGAGATATGC TCCGGCCGGAGGCGTAGCGCCTCTGCCACCGACGATGGCCAAGCACACAGCCTCTCCGAG TACTCCCAGCTCGAGCAGCTCACGTCCTCGGTATGCAGCAAGCTTGCTGCAGCAGGCACC GGAGATGGAGACGACCTTTCCCCGGCAAGTGTGGAGGACGCAGCAGATCGCCACCGTGTG GATCTGGAGATGCAGACGTTGGCTCGGTGCGTTCTCCGGAGCCGCAGCAGTATCGACGCA GTGACCAGGCAGACGTTTCTCCATGTCGCGAGGAGCTTCTATTACGTCGCTCATTGCTCA GCTCGAACGGTTGATGCCCACATCTCCAAGGTCTTGTTCGAGGATGTCGTGTAGCCACCG TTTGGGCCTCGTTTTGTATCTTTAAAGCAGTGTTTGGTTCCAGCCAGATTTAGTCTCGGC CAAATCAAATGTTTGAATGGTAATTACATGTATTAAATATAGTCTAATT