Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d024393_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:10:68584830:68594645:-1 gene:Zm00001d024393 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-glycerol phosphate synthase chloroplastic
Sequence	ATGGAGTCTCTCCTCGCCTCGCGATCCATTAGGTCTTCCTTCTCCGCCGTCGCCAGCACC AGGGGCGCCGCTTCCCCCAGGCCCTCGCGCGTCGCCACCCTCGCCAGCGCCGGCGCCGGC GCCCGCTCCCGCGCGCTCCGTGCTGGCCACACGGACGATATGCTGAACGCAAAGGAGCTG GTCCAATGGGAGAATGGCTTGTCATTCAATGACATAGCGGCTAGGCAGGGGATTCGCATC CGCAGACACTGCCGCCCCACTGCCTCCTTGAAGGAGATAGAGGAGGAGCTGGGAGCCCCC CTTAACATCCTAGAGAAGATCATTTGGGACAAGGAGATTGAAGTAGCTGAGGGGCATGCT AAGAAGCCTCTTGAGGAGGTGATTCAGGCTGCAACGAAAGCCCCTCCTTCAAGAGACTTC TATGGCGCTTTAGAAGCTGCCTACAAGCGTAATGGGGTGCCTGCATTGATTGCTGAGGTC AAGAAAGCATCCCCGAGTAGGGGTGTGCTCAGGGAGAACTTTAATCCTGTTGAAATTGCT CAAGCTTATGAAAAGAATGGAGCTGCATGTTTGAGCATTTTGACAGATGAGAAGTACTTT CAGGGAAGCTTTGATAATCTTGAAAAGGTGCGCAGCTCAGGAGTGAAGTGCCCTCTTCTC TGCAAGGAGTTTGTCATTGACAAGTGGCAAATCTATAATGCTCGCTCTAAGGGTGCTGAT GCAATTCTACTAATTGCTGCTGTGCTACCAGATCTTGACATAAGGAAATTTCTTCAGATT TGCGAAGAGTTGGGAATGACAGCTCTTATTGAGGTTCATGATGAAAGAGAGATGGAACGT GTGCTGAAGATAAATGGAGTTAAGCTTATTGGTATCAATAACCGAAGCCTTGAGACATTT GTTGTTGATACTTCGAACACCAAGATGTTGCTCGAGAAACATGGGGATATCATCAGGGAG AAGGGAATTTTGGTAATATCATTGTCTTGGGTGTATATTGATCCATTAAAATAA

Peptide Sequence

PEP ID	Zm00001d024393_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:10:68584830:68594645:-1 gene:Zm00001d024393 transcript:Zm00001d024393_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-glycerol phosphate synthase chloroplastic
Sequence	MESLLASRSIRSSFSAVASTRGAASPRPSRVATLASAGAGARSRALRAGHTDDMLNAKEL VQWENGLSFNDIAARQGIRIRRHCRPTASLKEIEEELGAPLNILEKIIWDKEIEVAEGHA KKPLEEVIQAATKAPPSRDFYGALEAAYKRNGVPALIAEVKKASPSRGVLRENFNPVEIA QAYEKNGAACLSILTDEKYFQGSFDNLEKVRSSGVKCPLLCKEFVIDKWQIYNARSKGAD AILLIAAVLPDLDIRKFLQICEELGMTALIEVHDEREMERVLKINGVKLIGINNRSLETF VVDTSNTKMLLEKHGDIIREKGILVISLSWVYIDPLK

Transcript Sequence

Transcript ID	Zm00001d024393_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:68584830:68594645:-1 gene:Zm00001d024393 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-glycerol phosphate synthase chloroplastic
Sequence	GATGGAGTCTCTCCTCGCCTCGCGATCCATTAGGTCTTCCTTCTCCGCCGTCGCCAGCAC CAGGGGCGCCGCTTCCCCCAGGCCCTCGCGCGTCGCCACCCTCGCCAGCGCCGGCGCCGG CGCCCGCTCCCGCGCGCTCCGTGCTGGCCACACGGACGATATGCTGAACGCAAAGGAGCT GGTCCAATGGGAGAATGGCTTGTCATTCAATGACATAGCGGCTAGGCAGGGGATTCGCAT CCGCAGACACTGCCGCCCCACTGCCTCCTTGAAGGAGATAGAGGAGGAGCTGGGAGCCCC CCTTAACATCCTAGAGAAGATCATTTGGGACAAGGAGATTGAAGTAGCTGAGGGGCATGC TAAGAAGCCTCTTGAGGAGGTGATTCAGGCTGCAACGAAAGCCCCTCCTTCAAGAGACTT CTATGGCGCTTTAGAAGCTGCCTACAAGCGTAATGGGGTGCCTGCATTGATTGCTGAGGT CAAGAAAGCATCCCCGAGTAGGGGTGTGCTCAGGGAGAACTTTAATCCTGTTGAAATTGC TCAAGCTTATGAAAAGAATGGAGCTGCATGTTTGAGCATTTTGACAGATGAGAAGTACTT TCAGGGAAGCTTTGATAATCTTGAAAAGGTGCGCAGCTCAGGAGTGAAGTGCCCTCTTCT CTGCAAGGAGTTTGTCATTGACAAGTGGCAAATCTATAATGCTCGCTCTAAGGGTGCTGA TGCAATTCTACTAATTGCTGCTGTGCTACCAGATCTTGACATAAGGAAATTTCTTCAGAT TTGCGAAGAGTTGGGAATGACAGCTCTTATTGAGGTTCATGATGAAAGAGAGATGGAACG TGTGCTGAAGATAAATGGAGTTAAGCTTATTGGTATCAATAACCGAAGCCTTGAGACATT TGTTGTTGATACTTCGAACACCAAGATGTTGCTCGAGAAACATGGGGATATCATCAGGGA GAAGGGAATTTTGGTAATATCATTGTCTTGGGTGTATATTGATCCATTAAAATAACCTTG TCAGGTTCTAGTTCAGTGTGTACACTCTGTCGGCTCAGACACATAGAACACAAATAGGAA TGCAAAATAAGTGTGTTATTCTCTAAAGACAAATATGAAATCATGATAAATATCCATTTT TAAACCTGAAATGTGAAAAGGCACTGGAATGGCCTGTTTTCCAATTTGTTGGACATATTA CTCCAATTAATGTATGAACATATATGAAAATAAGTTTCTTTAGAGCCTAAAGGAAACAGG AAAGATATTATGAACTGAAATTGACAATTTATTTTAAGCAGATATGTCAACTTGTACTCG ATATTACAGTTGTAGTGTATTGCATATTGGCTGGCTTCTGCCAGCTAGAAGCAGCACAAT TATTGAGCTGGCTTTTAAAAAGCTAGAAGCTAGCTTCTGAGGCTGCCTTTTGGTGTGGTG AGAAACTGAACAGTCATTACAAAAACCAATATAAAAAAAGCCAGGAAGCCAACTTTTGAG CTAAAAGACAAATAGACCCTATGACTATTAAGTGTCATAATCTGGTCCTTGCTGATATAT CTCTTTTTTCCTTTGTACTTGTCAGGTTGTTGGTGAATCAGGTCTGTTTACTCCGGATGA TGTTGCTTATGTTCAGAATGCTGGCGTTTCTGCTGTTTTGGTTGGGGAATCCCTGGTGAA GCAAGAGTGCCCTGGACGAGCCATTGTTGGGTTATTTGGCAAAGAACTGCTGCACTGAAT GAGAGGACAAAGATTGTAGTAGTACATGGTTTGGTGGTGAGGTGTTAGTGCTAGGCTGCT AGCTGTTAGCCATAGCATCATTTGCAGTAATAGCATTGGTTTTATTAATAATACCACCGA ATGTGACATGCAGAATAAAAATAATGTTCAATAAGTTCCATTCAGT