Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d024322_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:64559410:64560171:1 gene:Zm00001d024322 gene_biotype:protein_coding transcript_biotype:protein_coding description:NEDD8-specific protease 1
Sequence

ATGGGCTCTGGATCCAACTCCAAGGAGGGAGAGGAGCGGGTGCTGAGCCACGGTGACGTG
GTGCTCATCCGCTCCGACCTCGCAATCCTTCGCGGTCCCTGCTTCATCAACGACCGCATC
ATTGCCTTCTACTTCGCACACCTCTCCGCCAGCCTCCAGGACGACGACCTCCTCCTGCTT
CCGCCCTCCATCCCCTACCTCCTCTCCAACCTCCCTGACTCGGCCGCCGTCGCCGCCGTC
GCCGAGCCGCTCCGCCTCGCCTCCCGCCGCCTCGTGCTGCTTCCTGTCAACGACAATCCC
GATGCCTCCATCGCCGAGGGCGGTTCCCACTGGACCCTCCTCATCCTTGATAACATCACT
AGCCCCTCCGTGCCCCGCTTTGTCCACCACGACAGCATCGCTGGAGCGCCCAACCTCCCA
ATCGCTGCCCGCCTCGCCGACGCACTCCGCCCCCTGCTGTCAGGCAGCAATTCCAAGAGG
GATACTGTTCCGCTTATCGAGGGGCCCACCCCAAGGCAGACCAACGGCTATGACTGTGGT
GTCTATGTCATGGCCATCGCCAGGGCTCTGTGCGCCTGGTGGAAGAGTGGCCAGGACCAA
CGAGGAGGCGATTGGTTCCAGGCGGTGAGGAGCGGGGTGGACGCCCACAGCGTCGAGGCC
ATGAGGACCGACTTGCTGCAGCTAATCAGCACTCTCATCCAAGAGAAGGCCAATGCCAAT
TCCACACCCATGGGCGACACTGACCCAGGGTCATTAGAATGA

Peptide Sequence

PEP ID

Zm00001d024322_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:64559410:64560171:1 gene:Zm00001d024322 transcript:Zm00001d024322_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:NEDD8-specific protease 1
Sequence

MGSGSNSKEGEERVLSHGDVVLIRSDLAILRGPCFINDRIIAFYFAHLSASLQDDDLLLL
PPSIPYLLSNLPDSAAVAAVAEPLRLASRRLVLLPVNDNPDASIAEGGSHWTLLILDNIT
SPSVPRFVHHDSIAGAPNLPIAARLADALRPLLSGSNSKRDTVPLIEGPTPRQTNGYDCG
VYVMAIARALCAWWKSGQDQRGGDWFQAVRSGVDAHSVEAMRTDLLQLISTLIQEKANAN
STPMGDTDPGSLE

Transcript Sequence

Transcript ID

Zm00001d024322_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:64559410:64560171:1 gene:Zm00001d024322 gene_biotype:protein_coding transcript_biotype:protein_coding description:NEDD8-specific protease 1
Sequence

ATGGGCTCTGGATCCAACTCCAAGGAGGGAGAGGAGCGGGTGCTGAGCCACGGTGACGTG
GTGCTCATCCGCTCCGACCTCGCAATCCTTCGCGGTCCCTGCTTCATCAACGACCGCATC
ATTGCCTTCTACTTCGCACACCTCTCCGCCAGCCTCCAGGACGACGACCTCCTCCTGCTT
CCGCCCTCCATCCCCTACCTCCTCTCCAACCTCCCTGACTCGGCCGCCGTCGCCGCCGTC
GCCGAGCCGCTCCGCCTCGCCTCCCGCCGCCTCGTGCTGCTTCCTGTCAACGACAATCCC
GATGCCTCCATCGCCGAGGGCGGTTCCCACTGGACCCTCCTCATCCTTGATAACATCACT
AGCCCCTCCGTGCCCCGCTTTGTCCACCACGACAGCATCGCTGGAGCGCCCAACCTCCCA
ATCGCTGCCCGCCTCGCCGACGCACTCCGCCCCCTGCTGTCAGGCAGCAATTCCAAGAGG
GATACTGTTCCGCTTATCGAGGGGCCCACCCCAAGGCAGACCAACGGCTATGACTGTGGT
GTCTATGTCATGGCCATCGCCAGGGCTCTGTGCGCCTGGTGGAAGAGTGGCCAGGACCAA
CGAGGAGGCGATTGGTTCCAGGCGGTGAGGAGCGGGGTGGACGCCCACAGCGTCGAGGCC
ATGAGGACCGACTTGCTGCAGCTAATCAGCACTCTCATCCAAGAGAAGGCCAATGCCAAT
TCCACACCCATGGGCGACACTGACCCAGGGTCATTAGAATGA