Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d024037_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:10:38844204:38849055:-1 gene:Zm00001d024037 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-glucosidase2 description:Beta-glucosidase2
Sequence	ATGGCTCCACTTCTCGCCGCAGCCATGAACCACGCTGCCCATCCAGTCCTTAGAAGCCAT CTAGGACCCAACAATGAGAGTTTCTCACGACACCACCTATCTTCTTCACCGCAAAGCAGT AAGCGAAGGTTTAACCTTAGCTTTACGCCACGATCTGCAAGAGTAGGCAATCAAAATGGA GTCCAATTGTTGAGCCCTTCGGAAATCCCTCGAAGGGACTGGTTCCCCTCCGACTTCATC TTTGGTGCCGCCACTTCAGCGTACCAAATTGAAGGTGCTTGGAACGAAGATGGAAAGGGG GAAAGCAATTGGGATCACTTCTGCCACAATTTTCCGGAAAGGATAATGGACGGGAGCAAT GCAGACATTGGAGCGAATTCGTACCATATGTACAAAACGGATGTCAGATTGCTGAAGGAA ATGGGCATGGACGCATATAGGTTCTCTATCTCTTGGCCTAGAATACTGCCTAAGGGAACG GTCGAAGGAGGTATTAACCAGGATGGCATCGATTACTACAAAAGGCTCATCAACTTGTTG CTAGAGAATGGCATAGAGCCATATGTAACAATTTTCCACTGGGATGTCCCTCAAGCACTA GAAGAGAAGTACGGCGGATTCTTAGATAAGACTCATAAGAGGATTGTAAATGATTACAAA AACTTCGCTAAGGTGTGCTTCGACAACTTTGGTGACAAGGTGAAGAATTGGTTGACCTTT AATGAGCCCCAGACATTTACTTCATTTTCCTATGGAACCGGGGTCTTTGCCCCAGGACGA TGCTCACCGGGACTAGACTGTGCCATCCCAACTGGGAATTCACTCGTCGAACCTTACATT GCTGGCCACAACATTCTTCTAGCCCACGCTGAGGCTGTTGATCTTTACAACAAGTATTAC AAGGGCGAGAACGGCCGCATAGGTCTTGCATTTGATGTAATGGGTCGTGTGCCATACGGA ACATCATTTCTAGATGAACAGGCCAAAGAAAGGTCCATGGACATTAACCTAGGATGGTTC TTGGAGCCTGTGGTTCGTGGTGACTACCCCTTCTCAATGAGATCGTTAGCGAGGGAACGA CTACCCTTCTTCAGTGACAAACAGCAAGAGAAGCTTGTGGGATCCTATAACATGTTGGGA ATAAACTACTACACCTCAATATTCTCCAAACATATCGACATCTCACCAAAATACTCGCCT GTTCTCAACACTGACGACGCCTACGCTAGTCAAGAAACGTATGGGCCTGACGGGAAACCC ATTGGTCCTCCTATGGGAAATCCGTGGATCTACTTATACCCAGAAGGCCTAAAGGATATC CTTATGATCATGAAGAACAAATATGGAAACCCACCTATCTACATCACTGAGAACGGAATC GGGGATGTTGATACAAAGGAGAAACCTCTACCCATGGAGGCTGCCTTAAATGACTACAAA AGGCTAGATTACATCCAGCGCCACATCTCAACTCTCAAGGAGTCAATAGACTTGGGAGCA AATGTGCATGGCTACTTCGCTTGGTCTCTGCTGGATAACTTTGAATGGTACGCCGGCTAC ACCGAACGTTATGGCATTGTCTACGTCGACCGCAAAAATAACTACACGCGCTACATGAAG GAGTCAGCCAAGTGGTTAAAAGAGTTCAATACTGCGAAGAAGCCTAGCAAGAAGATTATT ACGCCAGCTTAA

Peptide Sequence

PEP ID	Zm00001d024037_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:10:38844204:38849055:-1 gene:Zm00001d024037 transcript:Zm00001d024037_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-glucosidase2 description:Beta-glucosidase2
Sequence	MAPLLAAAMNHAAHPVLRSHLGPNNESFSRHHLSSSPQSSKRRFNLSFTPRSARVGNQNG VQLLSPSEIPRRDWFPSDFIFGAATSAYQIEGAWNEDGKGESNWDHFCHNFPERIMDGSN ADIGANSYHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTVEGGINQDGIDYYKRLINLL LENGIEPYVTIFHWDVPQALEEKYGGFLDKTHKRIVNDYKNFAKVCFDNFGDKVKNWLTF NEPQTFTSFSYGTGVFAPGRCSPGLDCAIPTGNSLVEPYIAGHNILLAHAEAVDLYNKYY KGENGRIGLAFDVMGRVPYGTSFLDEQAKERSMDINLGWFLEPVVRGDYPFSMRSLARER LPFFSDKQQEKLVGSYNMLGINYYTSIFSKHIDISPKYSPVLNTDDAYASQETYGPDGKP IGPPMGNPWIYLYPEGLKDILMIMKNKYGNPPIYITENGIGDVDTKEKPLPMEAALNDYK RLDYIQRHISTLKESIDLGANVHGYFAWSLLDNFEWYAGYTERYGIVYVDRKNNYTRYMK ESAKWLKEFNTAKKPSKKIITPA

Transcript Sequence

Transcript ID	Zm00001d024037_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:38844204:38849055:-1 gene:Zm00001d024037 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-glucosidase2 description:Beta-glucosidase2
Sequence	ATCGATTTGGCATCCTAGCTCGTCTATCTATAAATAGATGCACCAGCTCCACCTGGTGTA TTCACTACTCAAGCCGCTCAAAACTCTAGCTAGCTAGCAGGGGGGGAAATGGCTCCACTT CTCGCCGCAGCCATGAACCACGCTGCCCATCCAGTCCTTAGAAGCCATCTAGGACCCAAC AATGAGAGTTTCTCACGACACCACCTATCTTCTTCACCGCAAAGCAGTAAGCGAAGGTTT AACCTTAGCTTTACGCCACGATCTGCAAGAGTAGGCAATCAAAATGGAGTCCAATTGTTG AGCCCTTCGGAAATCCCTCGAAGGGACTGGTTCCCCTCCGACTTCATCTTTGGTGCCGCC ACTTCAGCGTACCAAATTGAAGGTGCTTGGAACGAAGATGGAAAGGGGGAAAGCAATTGG GATCACTTCTGCCACAATTTTCCGGAAAGGATAATGGACGGGAGCAATGCAGACATTGGA GCGAATTCGTACCATATGTACAAAACGGATGTCAGATTGCTGAAGGAAATGGGCATGGAC GCATATAGGTTCTCTATCTCTTGGCCTAGAATACTGCCTAAGGGAACGGTCGAAGGAGGT ATTAACCAGGATGGCATCGATTACTACAAAAGGCTCATCAACTTGTTGCTAGAGAATGGC ATAGAGCCATATGTAACAATTTTCCACTGGGATGTCCCTCAAGCACTAGAAGAGAAGTAC GGCGGATTCTTAGATAAGACTCATAAGAGGATTGTAAATGATTACAAAAACTTCGCTAAG GTGTGCTTCGACAACTTTGGTGACAAGGTGAAGAATTGGTTGACCTTTAATGAGCCCCAG ACATTTACTTCATTTTCCTATGGAACCGGGGTCTTTGCCCCAGGACGATGCTCACCGGGA CTAGACTGTGCCATCCCAACTGGGAATTCACTCGTCGAACCTTACATTGCTGGCCACAAC ATTCTTCTAGCCCACGCTGAGGCTGTTGATCTTTACAACAAGTATTACAAGGGCGAGAAC GGCCGCATAGGTCTTGCATTTGATGTAATGGGTCGTGTGCCATACGGAACATCATTTCTA GATGAACAGGCCAAAGAAAGGTCCATGGACATTAACCTAGGATGGTTCTTGGAGCCTGTG GTTCGTGGTGACTACCCCTTCTCAATGAGATCGTTAGCGAGGGAACGACTACCCTTCTTC AGTGACAAACAGCAAGAGAAGCTTGTGGGATCCTATAACATGTTGGGAATAAACTACTAC ACCTCAATATTCTCCAAACATATCGACATCTCACCAAAATACTCGCCTGTTCTCAACACT GACGACGCCTACGCTAGTCAAGAAACGTATGGGCCTGACGGGAAACCCATTGGTCCTCCT ATGGGAAATCCGTGGATCTACTTATACCCAGAAGGCCTAAAGGATATCCTTATGATCATG AAGAACAAATATGGAAACCCACCTATCTACATCACTGAGAACGGAATCGGGGATGTTGAT ACAAAGGAGAAACCTCTACCCATGGAGGCTGCCTTAAATGACTACAAAAGGCTAGATTAC ATCCAGCGCCACATCTCAACTCTCAAGGAGTCAATAGACTTGGGAGCAAATGTGCATGGC TACTTCGCTTGGTCTCTGCTGGATAACTTTGAATGGTACGCCGGCTACACCGAACGTTAT GGCATTGTCTACGTCGACCGCAAAAATAACTACACGCGCTACATGAAGGAGTCAGCCAAG TGGTTAAAAGAGTTCAATACTGCGAAGAAGCCTAGCAAGAAGATTATTACGCCAGCTTAA AAACATGGGACCTCGTGATGTGGGTACGGTGCCACCCATGAAATAAAAACCTAGTGTGTG GTTTGAAACCTAAATTTTTCTTTTTCTTTTTTGCACCATGAGAGAGGTAGTGGAGTCATA TTCTCCAGCACCGTGGCTAATAATGTATTGTTGCAGTACAATCTAGCATTGTCGTCATGC AATAAATAAAGTGACTGGTTTCCCTATT