Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d023946_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:30976716:30980257:-1 gene:Zm00001d023946 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative methyltransferase

Sequence

ATGGCATCCTCGGCCGCCGCTCGCCGCCTTCTCCTCCTCCGCCACCGCCATGGGAACCTT
CTCCCCAAACGCCACTTCTCTTCCTCATCCGCTCCCGACGGCCTCGACGACGGCGGTGGC
CGCGTCAAGATCTTCGACCGCGACCTGAAGCGCCGGCACCGGGACCGCGCGGCGTGGGTG
ATGCGTGAGACCGATGGGCTCGTGGATGCGGTCGCTGAGAATCTCCTAGACCGCCTCGAG
GACTGCAGGAAAGCCTTCCCCTCCGCACTCTGCCTTGGGGGCTCCGCCGGCGCCGTCCGC
CGCTTGCTCCGTGGCCGCGGTGGGATTGAGAGGCTGATCATGATGGACATGTCAGCCGAT
ATGGTGAAGAAGTGGCGAGAGTCAGAGAATGCCACTGGTGATGGGCCTGAGACCCACTTT
GTTATCGGCGATGAGGAGTTTCTTCCAATCAAAGAGAGCTCACAGGATTTGATAATGAGC
TGTCTTGGACTTCATTGGACAAATGATCTACCTGGAGCAATGATACAGTGTAGGCTGGCG
TTGCAACCTGATGGCCTTTTTCTGGCAGCAATTCTTGGTGGAGAAACACTGAAGGAGCTT
AGAATTGCATGCACAGTTGCTCAAATGGAACGCGAAGGGGGCATCAGTCCTCGAATGTCC
CCTTTAGCGCAAGTCCGTGACGCAGGAAACCTTTTGACAAGGGCAGGCTTTACCCTTCCA
GGAGTTGATGTTGATCAGTATACCGTTAGATACAATAATGCTTTGGAACTTGTTGAACAT
CTTAGAGCAATGGGGGAAACAAATGCTCTCTTTCAAAGAAATCCTGTGTTGAAAAGGGAT
ACGGCCTTGGCAACTGCAGCAATTTACCAGTCAATGTTTGGGTTAGAAGACGGATCTATT
CCAGCAACCTTTCAAGTAATTTACATGACTGGCTGGAGGGAGCATCCATCACAGCAAAAG
GCTAAGAGAAGGGGTTCTGCGACCATATCATTCGGTGATATACAGAAACAATTTGGTCCC
AGTGAGAACTGA

Peptide Sequence

PEP ID

Zm00001d023946_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:30976716:30980257:-1 gene:Zm00001d023946 transcript:Zm00001d023946_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative methyltransferase

Sequence

MASSAAARRLLLLRHRHGNLLPKRHFSSSSAPDGLDDGGGRVKIFDRDLKRRHRDRAAWV
MRETDGLVDAVAENLLDRLEDCRKAFPSALCLGGSAGAVRRLLRGRGGIERLIMMDMSAD
MVKKWRESENATGDGPETHFVIGDEEFLPIKESSQDLIMSCLGLHWTNDLPGAMIQCRLA
LQPDGLFLAAILGGETLKELRIACTVAQMEREGGISPRMSPLAQVRDAGNLLTRAGFTLP
GVDVDQYTVRYNNALELVEHLRAMGETNALFQRNPVLKRDTALATAAIYQSMFGLEDGSI
PATFQVIYMTGWREHPSQQKAKRRGSATISFGDIQKQFGPSEN

Transcript Sequence

Transcript ID

Zm00001d023946_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:30976716:30980257:-1 gene:Zm00001d023946 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative methyltransferase

Sequence

CAAATTTCTCTCAACGGTCCTAGCAATCGCGTCACCGTCTTCTCCATCGCCGGTGCTCCC
TTACTCTCGATGGCATCCTCGGCCGCCGCTCGCCGCCTTCTCCTCCTCCGCCACCGCCAT
GGGAACCTTCTCCCCAAACGCCACTTCTCTTCCTCATCCGCTCCCGACGGCCTCGACGAC
GGCGGTGGCCGCGTCAAGATCTTCGACCGCGACCTGAAGCGCCGGCACCGGGACCGCGCG
GCGTGGGTGATGCGTGAGACCGATGGGCTCGTGGATGCGGTCGCTGAGAATCTCCTAGAC
CGCCTCGAGGACTGCAGGAAAGCCTTCCCCTCCGCACTCTGCCTTGGGGGCTCCGCCGGC
GCCGTCCGCCGCTTGCTCCGTGGCCGCGGTGGGATTGAGAGGCTGATCATGATGGACATG
TCAGCCGATATGGTGAAGAAGTGGCGAGAGTCAGAGAATGCCACTGGTGATGGGCCTGAG
ACCCACTTTGTTATCGGCGATGAGGAGTTTCTTCCAATCAAAGAGAGCTCACAGGATTTG
ATAATGAGCTGTCTTGGACTTCATTGGACAAATGATCTACCTGGAGCAATGATACAGTGT
AGGCTGGCGTTGCAACCTGATGGCCTTTTTCTGGCAGCAATTCTTGGTGGAGAAACACTG
AAGGAGCTTAGAATTGCATGCACAGTTGCTCAAATGGAACGCGAAGGGGGCATCAGTCCT
CGAATGTCCCCTTTAGCGCAAGTCCGTGACGCAGGAAACCTTTTGACAAGGGCAGGCTTT
ACCCTTCCAGGAGTTGATGTTGATCAGTATACCGTTAGATACAATAATGCTTTGGAACTT
GTTGAACATCTTAGAGCAATGGGGGAAACAAATGCTCTCTTTCAAAGAAATCCTGTGTTG
AAAAGGGATACGGCCTTGGCAACTGCAGCAATTTACCAGTCAATGTTTGGGTTAGAAGAC
GGATCTATTCCAGCAACCTTTCAAGTAATTTACATGACTGGCTGGAGGGAGCATCCATCA
CAGCAAAAGGCTAAGAGAAGGGGTTCTGCGACCATATCATTCGGTGATATACAGAAACAA
TTTGGTCCCAGTGAGAACTGAGCCTCACTGCTTCAGAAATGTGTTCCCAAACCCCACTCA
GGCTTTGTTTGGGTAAAGAGGAACTGAAGTGGATTGAGGTGTATTGAAAGGACTGAAAGG
GAAATTAGTTCATGTTACACTTCAATACACCCCATACCACCTCAATTCACTCCAATAAGA
GATTACCCAAACAGGCCTCATGTGAGAGCCTCCGGAGCTGGGTCTAACCATTTTAGTATT
CCCAAACCCTTGATCGAAAATTAAAAAAAAAAACAACATTTGAGGAAAGAAAAGAAATCC
TCTGGTGGTTCCACCCAACGGCTTTGTATTCCTGAAGGTTGATGTTTGTGGTGGGCTTCT
GTTGCCTGTTGTATGAACATACTGAGTTTGATGGAATCCAGCAATTGTGAAATTCATCTG
T