Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d023904_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:10:27313562:27316232:-1 gene:Zm00001d023904 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin binding protein homolog4 description:Auxin-binding protein 4

Sequence

ATGGTGCGTCGACGACCCGCCACCGGGGCAGCCCCGAGACCCCACCTCGCCGCCGTCGGT
CGCGGGCTGCTCCTCGCGTCCGTCCTCGCGGCCGCTGCCTCCTCCCTCCCAGTAGCCGAG
TCGTCCTGCCCGCGAGACAACTCACTGGTGAGAGACATAAGCCGAATGCAGCAGCGCAAC
TACGGGAGGGAAGGATTCTCGCATATAACTGTCACAGGTGCTCTTGCTCACGGGACGAAG
GAGGTGGAAGTGTGGCTACAAACATTTGGTCCAGGTCAAAGGACCCCAATCCACAGGCAT
TCTTGTGAAGAGGTTTTCATTGTCCTCAAGGGGAAAGGCACGCTCTTACTCGGGTCGAGC
TCGCTGAAGTACCCAGGACAGCCGCAGGAAGTTCCTGTCTTTCAGAATACCACATTTTCG
ATCCCTGTAAATGATCCACATCAGGTCTGGAATTCTAATGAGCACGAAGATTTGCAAGTT
CTTGTGATCATATCGCGCCCACCGGTCAAGATATTTATATACGATGATTGGAGTATGCCT
CATACAGCTGCAAAGCTGAAATTCCCCTACTTCTGGGATGAGGACTGCTTGCCAGCACCA
AAAGATGAACTCTAG

Peptide Sequence

PEP ID

Zm00001d023904_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:10:27313562:27316232:-1 gene:Zm00001d023904 transcript:Zm00001d023904_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin binding protein homolog4 description:Auxin-binding protein 4

Sequence

MVRRRPATGAAPRPHLAAVGRGLLLASVLAAAASSLPVAESSCPRDNSLVRDISRMQQRN
YGREGFSHITVTGALAHGTKEVEVWLQTFGPGQRTPIHRHSCEEVFIVLKGKGTLLLGSS
SLKYPGQPQEVPVFQNTTFSIPVNDPHQVWNSNEHEDLQVLVIISRPPVKIFIYDDWSMP
HTAAKLKFPYFWDEDCLPAPKDEL

Transcript Sequence

Transcript ID

Zm00001d023904_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:27313562:27316232:-1 gene:Zm00001d023904 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin binding protein homolog4 description:Auxin-binding protein 4

Sequence

CTTTCCAGGAGGATACCACCTCCCGAACATGGTGCGTCGACGACCCGCCACCGGGGCAGC
CCCGAGACCCCACCTCGCCGCCGTCGGTCGCGGGCTGCTCCTCGCGTCCGTCCTCGCGGC
CGCTGCCTCCTCCCTCCCAGTAGCCGAGTCGTCCTGCCCGCGAGACAACTCACTGGTGAG
AGACATAAGCCGAATGCAGCAGCGCAACTACGGGAGGGAAGGATTCTCGCATATAACTGT
CACAGGTGCTCTTGCTCACGGGACGAAGGAGGTGGAAGTGTGGCTACAAACATTTGGTCC
AGGTCAAAGGACCCCAATCCACAGGCATTCTTGTGAAGAGGTTTTCATTGTCCTCAAGGG
GAAAGGCACGCTCTTACTCGGGTCGAGCTCGCTGAAGTACCCAGGACAGCCGCAGGAAGT
TCCTGTCTTTCAGAATACCACATTTTCGATCCCTGTAAATGATCCACATCAGGTCTGGAA
TTCTAATGAGCACGAAGATTTGCAAGTTCTTGTGATCATATCGCGCCCACCGGTCAAGAT
ATTTATATACGATGATTGGAGTATGCCTCATACAGCTGCAAAGCTGAAATTCCCCTACTT
CTGGGATGAGGACTGCTTGCCAGCACCAAAAGATGAACTCTAGGTTAAGTGGTTCCTGCA
ATTTGTCAGCTTCGTGTTCATCCACAATCCTGGTGGACTACGACTCACATCTACAAGTTG
AAAACCATTAGTGTACTCTTCATGTGTAGTTTTGTGTTGTGACTCTGGGAAATCCATATT
GACAACGTTTATAAAATTAAGCACTTCTGGAGC