Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d023868_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:10:25595490:25600235:-1 gene:Zm00001d023868 gene_biotype:protein_coding transcript_biotype:protein_coding description:Galactose oxidase/kelch repeat superfamily protein
Sequence

ATGTCCTGCCCAGCGTTTTTTTTTTTGCTTTTCTTTTTCAGGTCGAAGGGTGACCCAAGT
GATCCTTTGAACAGCTCCAGGAGTTCTGTTGGTCCCAGTAAACACCTCAGTCTGCCCAAT
GGGAATGACGCGACTATGACGTCAGTAAGTGGCCACGCAGATGATCTTTCCTACCGTTGC
TCGTCCGATACGTTTGATCCCCAAGGACGCACTTTCGATATTTCAGAAAATTGGACTGTG
CTGTCCACAGAGGGAGACAAACCTATTCCTCGTTTCTATCATGCAGCAGCCATTGTAAGT
AGCAAGATGGTAGTGTTTGGTGGTGATTCTGGTAATCGCTTATTAGATGACACAAAGGTA
TGGAGTCTTCTTTTTCCTTATATATGTTGTTTGGATTTAGATTGCTGCTTGTCCTTTGGA
TGTTTTGGTATGAATTTCACATACTCGATCAATGTTTTCTTACTTGAAGCCGGTTATGTT
ATGCTATTGTGGAAAATTGTATGCTGGACACTATGTTTAACCTATTTGCACTTTGACATC
ATCCAAAACTCAAAGTATTATAAGTCAATGATCTATCATTCAAAGAAGGCAATGATTGTT
CATGATGATGGCCTTTTTGTATGCACTGCTTTACTCCTGGAAAAATATTTATACATGTGT
GATGTACAGGTTCCTTGGGGAAATAGTGTCATCCTTGTCGGAGGTAAAACTGAGCCTGCT
TCTGATCATTTATCAGTATGGACTTTCAATACAGAAACAGAGCTTTGGTCACTTATTGAA
GCCAAGGGTGATATCCCTGCAGCTCGAAGCGGACACACGGTGATTAGAGCTGGTGCTACA
TTGATACTTTTTGGCGGTGAGGACACAAAAGGAAAGAAACGGCATGACCTTCACATGTTT
GATCTGAAGTCATCAACATGGCTTCCATTGAACTATAAAGGCACTGGACCTTCTCCAAGA
TCCAATCATATTGCTACACTGTATGATGATAGGGTCCTTTTAATTTTTGGAGGCCACTCA
AAATCTAAGACACTTAATGACTTGTATTCTTTGGATTTCGATACAATGGTTTGGTCAAGA
GTGAAGACCCATGGTCCTCACCCATCACCTCGAGCTGGTTGCAGCGGAACTCTCTGTGGA
ACTAAGTGGTACATAGCTGGCGGCGCAAGCAAGAAAAAACGACATGCTGAAACTTGGGTT
TTTGATGTTCTACAATGTAAATGGTCTGTTTGTGTAGTGCCCCCTAGTTCATCGATTACT
ACAAAAAAAGGTTTTAGCATGGTTCCTTTCTACCACAAGGACAAGATTGCTCTTATTGCA
TTTGGAGGAAACAAAAAAGAGCCATGCAACAAGGTTGAAGTATTAGTGGTACTGCAAAAT
GAGCATTCTTTTAGTTGGCGCTCAGCCCCAGAAGTGGACACCATGGTGTATGAGTATTCT
CCAAGCAATAAGGAGCTTGCTGATCATCTCCACAAATGTGCCCCCTTGTACTCTAATAGT
TCCATCGCAAGGCATAGTCTCACTTCTGTGATAGAACACCCTCCTAGAAGGGAACCCCTC
TCTGAGTCATTGTTGAAGCAGTCCAGTTTGGGCACTTCACTCCATACGCAGTTGGATCAC
GCAGAAGAGTGCAGCCTAGGTCAGAAACTGCAGAAACCAATCGATGATGACAGATATGAT
GACGTAGATGACTCTTCTTCATGCCAAGATAGCACTCCAAAAGGGCCCTACAGCAAAAGG
ACAGGGCCTGGTTTTCAGAATGGCGCGGAAAACATGGTGACTGGAGGATCAAAAGTGAGA
AGGATAGCTAGATGCTCTTCAGATGTTGGCCAGAGCCACTTGTACAACACAAAAATAGCA
GACTTGATCAGAAGAAACACCACGCTCGAAGACCAGCTTGCGACCGCACTGGCAAGCAAA
GATCAGCTAGACAAGAGCTTAGCATCGGTCATTCACAGCAGAGGACAGCTGGAGAAGATG
CTTGCCAACAAAGATAAGGAGGCTGAGATGCTGAAAGAGAAGATAGCATGCTTAGAGCTG
GCGCAAGAAGAGTCGAACAGCCTCTCGAACACAGTGCACGCTGATAATGTGCGCCTGGAG
CGTGAAGTGGCGTTCCTGAAGGCCGTCACAGGCGAAACCCAGAAGGCAAGGAAACTTGAT
GAGCTGCATTCCACTCGTAGAGTTTTAGCAGGGGAACAGTCGCGCGCGTTCCAGCTCCAG
GTTGAAGTGTTCCATCTCAAGCAGAGGCTGCAGATACTGGAGGGAAGATCAGGAACACCC
AACAAACAACCGCTATAG

Peptide Sequence

PEP ID

Zm00001d023868_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:10:25595490:25600235:-1 gene:Zm00001d023868 transcript:Zm00001d023868_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Galactose oxidase/kelch repeat superfamily protein
Sequence

MSCPAFFFLLFFFRSKGDPSDPLNSSRSSVGPSKHLSLPNGNDATMTSVSGHADDLSYRC
SSDTFDPQGRTFDISENWTVLSTEGDKPIPRFYHAAAIVSSKMVVFGGDSGNRLLDDTKV
WSLLFPYICCLDLDCCLSFGCFGMNFTYSINVFLLEAGYVMLLWKIVCWTLCLTYLHFDI
IQNSKYYKSMIYHSKKAMIVHDDGLFVCTALLLEKYLYMCDVQVPWGNSVILVGGKTEPA
SDHLSVWTFNTETELWSLIEAKGDIPAARSGHTVIRAGATLILFGGEDTKGKKRHDLHMF
DLKSSTWLPLNYKGTGPSPRSNHIATLYDDRVLLIFGGHSKSKTLNDLYSLDFDTMVWSR
VKTHGPHPSPRAGCSGTLCGTKWYIAGGASKKKRHAETWVFDVLQCKWSVCVVPPSSSIT
TKKGFSMVPFYHKDKIALIAFGGNKKEPCNKVEVLVVLQNEHSFSWRSAPEVDTMVYEYS
PSNKELADHLHKCAPLYSNSSIARHSLTSVIEHPPRREPLSESLLKQSSLGTSLHTQLDH
AEECSLGQKLQKPIDDDRYDDVDDSSSCQDSTPKGPYSKRTGPGFQNGAENMVTGGSKVR
RIARCSSDVGQSHLYNTKIADLIRRNTTLEDQLATALASKDQLDKSLASVIHSRGQLEKM
LANKDKEAEMLKEKIACLELAQEESNSLSNTVHADNVRLEREVAFLKAVTGETQKARKLD
ELHSTRRVLAGEQSRAFQLQVEVFHLKQRLQILEGRSGTPNKQPL

Transcript Sequence

Transcript ID

Zm00001d023868_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:25595490:25600235:-1 gene:Zm00001d023868 gene_biotype:protein_coding transcript_biotype:protein_coding description:Galactose oxidase/kelch repeat superfamily protein
Sequence

TGGCATAGGCTCATGTCCTGCCCAGCGTTTTTTTTTTTGCTTTTCTTTTTCAGGTCGAAG
GGTGACCCAAGTGATCCTTTGAACAGCTCCAGGAGTTCTGTTGGTCCCAGTAAACACCTC
AGTCTGCCCAATGGGAATGACGCGACTATGACGTCAGTAAGTGGCCACGCAGATGATCTT
TCCTACCGTTGCTCGTCCGATACGTTTGATCCCCAAGGACGCACTTTCGATATTTCAGAA
AATTGGACTGTGCTGTCCACAGAGGGAGACAAACCTATTCCTCGTTTCTATCATGCAGCA
GCCATTGTAAGTAGCAAGATGGTAGTGTTTGGTGGTGATTCTGGTAATCGCTTATTAGAT
GACACAAAGGTATGGAGTCTTCTTTTTCCTTATATATGTTGTTTGGATTTAGATTGCTGC
TTGTCCTTTGGATGTTTTGGTATGAATTTCACATACTCGATCAATGTTTTCTTACTTGAA
GCCGGTTATGTTATGCTATTGTGGAAAATTGTATGCTGGACACTATGTTTAACCTATTTG
CACTTTGACATCATCCAAAACTCAAAGTATTATAAGTCAATGATCTATCATTCAAAGAAG
GCAATGATTGTTCATGATGATGGCCTTTTTGTATGCACTGCTTTACTCCTGGAAAAATAT
TTATACATGTGTGATGTACAGGTTCCTTGGGGAAATAGTGTCATCCTTGTCGGAGGTAAA
ACTGAGCCTGCTTCTGATCATTTATCAGTATGGACTTTCAATACAGAAACAGAGCTTTGG
TCACTTATTGAAGCCAAGGGTGATATCCCTGCAGCTCGAAGCGGACACACGGTGATTAGA
GCTGGTGCTACATTGATACTTTTTGGCGGTGAGGACACAAAAGGAAAGAAACGGCATGAC
CTTCACATGTTTGATCTGAAGTCATCAACATGGCTTCCATTGAACTATAAAGGCACTGGA
CCTTCTCCAAGATCCAATCATATTGCTACACTGTATGATGATAGGGTCCTTTTAATTTTT
GGAGGCCACTCAAAATCTAAGACACTTAATGACTTGTATTCTTTGGATTTCGATACAATG
GTTTGGTCAAGAGTGAAGACCCATGGTCCTCACCCATCACCTCGAGCTGGTTGCAGCGGA
ACTCTCTGTGGAACTAAGTGGTACATAGCTGGCGGCGCAAGCAAGAAAAAACGACATGCT
GAAACTTGGGTTTTTGATGTTCTACAATGTAAATGGTCTGTTTGTGTAGTGCCCCCTAGT
TCATCGATTACTACAAAAAAAGGTTTTAGCATGGTTCCTTTCTACCACAAGGACAAGATT
GCTCTTATTGCATTTGGAGGAAACAAAAAAGAGCCATGCAACAAGGTTGAAGTATTAGTG
GTACTGCAAAATGAGCATTCTTTTAGTTGGCGCTCAGCCCCAGAAGTGGACACCATGGTG
TATGAGTATTCTCCAAGCAATAAGGAGCTTGCTGATCATCTCCACAAATGTGCCCCCTTG
TACTCTAATAGTTCCATCGCAAGGCATAGTCTCACTTCTGTGATAGAACACCCTCCTAGA
AGGGAACCCCTCTCTGAGTCATTGTTGAAGCAGTCCAGTTTGGGCACTTCACTCCATACG
CAGTTGGATCACGCAGAAGAGTGCAGCCTAGGTCAGAAACTGCAGAAACCAATCGATGAT
GACAGATATGATGACGTAGATGACTCTTCTTCATGCCAAGATAGCACTCCAAAAGGGCCC
TACAGCAAAAGGACAGGGCCTGGTTTTCAGAATGGCGCGGAAAACATGGTGACTGGAGGA
TCAAAAGTGAGAAGGATAGCTAGATGCTCTTCAGATGTTGGCCAGAGCCACTTGTACAAC
ACAAAAATAGCAGACTTGATCAGAAGAAACACCACGCTCGAAGACCAGCTTGCGACCGCA
CTGGCAAGCAAAGATCAGCTAGACAAGAGCTTAGCATCGGTCATTCACAGCAGAGGACAG
CTGGAGAAGATGCTTGCCAACAAAGATAAGGAGGCTGAGATGCTGAAAGAGAAGATAGCA
TGCTTAGAGCTGGCGCAAGAAGAGTCGAACAGCCTCTCGAACACAGTGCACGCTGATAAT
GTGCGCCTGGAGCGTGAAGTGGCGTTCCTGAAGGCCGTCACAGGCGAAACCCAGAAGGCA
AGGAAACTTGATGAGCTGCATTCCACTCGTAGAGTTTTAGCAGGGGAACAGTCGCGCGCG
TTCCAGCTCCAGGTTGAAGTGTTCCATCTCAAGCAGAGGCTGCAGATACTGGAGGGAAGA
TCAGGAACACCCAACAAACAACCGCTATAGGCTATAGTGGTCACATTTCTACATTTCTGC
ACATCGATCGTTGCAAGTTTGCAACCCCCCACCCCCCAATGTAAATGATTGTGTGGCGAG
CTTTATGGTACCATGTTAGTACATGCGCTGATGTTGATCTGTAATTTGCAGGGTATGGTA
AAACTATAAATAGCTGACGGATTGAACCATGCTAATATGTGTAGATATTGATCTGTAATT
TGCAGGGACATGGTAAAAAAATAAAAATGTGCAAGCTCTACCTGAATGTGTCAAA