Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d023841_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:10:24262563:24269480:1 gene:Zm00001d023841 gene_biotype:protein_coding transcript_biotype:protein_coding description:P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Sequence	ATGGCGATGGCGGCGGCGGTTTTGGAGGAGGCGCTGCGATGGGGTGGAGGAAGCGTTGGG GACGACAACGTGGCCGCGCGCAGGGCAGAGGAGGCCGCGATAAGAAGGCATGAAGCAGCC AGTTGGTTGCGAAAAACGGTTGGGATAGTGTGTGCAAAGGACCTGCCGGAAGAGCCCTCT GAGGAGGAATTCCAGCTTGGTCTGAGAAATGGCATTGTCCTCTGCAACGCACTGAATAAG GTCCAGCCAGGCGCCATACCCAAGATTGTCGGAGTCCAGTCAGATACTGCGGTCCCTGCA GATGGCTCAGCTTTGTGTGCTTATCAGTACTTCGAAAATCTGCGAAACTTCGTTGTCGTT ATACAAGATTTTGGCCTCCCAACATTTGAGGTGTCTGATTTGGAAAAGGGTGGCAAAAGT GTTCGAATTGTGGACTGTGTTCTTGCTCTGAAGTCATTCAGTGAAAGTAAGAAAACAGGG AGACAAGCTGCATGTAAATATGGTGGCATTTTGAAGCCTTTGGTTTCCGGAAATTATTTC ATACTTAAGAATTGTGATGCTTTTATGAATAAAAATGCGAGAATTCACACAGAAGAGGCT ACCCTGAATGGTTTTCGAGGAGAGCAAAACTTATCTCTTGATTGTTCTCCAGAATCCTAT GAGATTACTTCAGACAACCTTAGCACGATTATTCGCACAATTCTCTTAGATAAAAAACCA GAAGAAATCCCACTGATTGTTGAATCACTACTAAACAAAGTTATTCAGGAATACGAGCTT CGCTTTGCAAATCAGAACTTGATGGATGAAGAGAAGCAAAATAACTTGACTACGAAGGAG GAAGCCAGTTTTGCAGTAAATGGTAGTAATGCAGCTCAAAAGTTCCATCTGAAGGCTGAA ATAAATTTTGATCTACAGCACAAACAGATCAAGGGGTTGAGAGGTACTGTTTCTTCTATC AAGTCTGGAATGGAACAACTGAAATTGCACTACTCTGAGGAGTTCACTAAACTTGGGAAG CATTTGTACACTATATCCAATGCTGCTTCTGGATACCATAAAGTTCTTGAGGAAAATCGC AAGCTGTACAACCAGATACAGGATCTTAAAGGAAATATTAGAGTTTATTGTCGAGTGAGG CCTTTCCTACCTGGGCAAATAAGTTCCTTAAGCAGTGTTGCTGGAATGGAAGAAAGAACC ATTACAATAATGACTCCTACAAAATATGGAAAAGATGGAAACAAATCTTTCACTTTCAAC AAAGTCTTTGGTCCAGCAGCCACTCAAGATGAGGTCTTTTCAGATATGCAACCATTGATA CGATCAGTTCTTGATGGTTTTAATGTCTGTATATTTGCATATGGCCAAACAGGATCTGGG AAGACTTATACAATGAGCGGACCTAAAGTTTTAACAGAGGAAAGCCTAGGTGTCAACTAT AAAGCATTAAATGACTTATTTAATCTTCAAGCACAGAGAAAGGGGACAATAGATTATGAT ATTTCTGTACAGATGATTGAGATATACAATGAACAAGTGAGAGATCTCCTTCAGGATAGT GGAAACAGAAGATTAGAAATTAAAAATACATCACAGAAAGGACTTGCGGTTCCAGATGCA AGCATAGTTCCTGTCACATCTACGTCTGATGTTGTTGAACTGATGAATCAAGGCCAAAAG AATCGTGCAGTGGGTTCAACAGCCATAAATGACCGCAGTAGCCGCTCCCACAGTTGCTTG ACTGTTCATGTGCAAGGAAGAGATTTGACATCTGGGACAGTTTTAAGAGGTTGCATGCAT CTGGTCGATCTAGCAGGCAGTGAAAGGGTTGATAAGTCCGAGGTTGTTGGAGATAGACTA AAGGAGGCTCAGTACATAAACAAGTCACTTTCAGCACTGGGAGATGTGATTGCATCCCTT TCCCAAAAGAACACACATGTACCTTACCGAAACAGCAAGCTCACCCAGCTCTTGCAAGAT TCACTTGGGGGACAAGCAAAAACACTTATGTTTGTTCACATAAGCCCAGAACTTGACGCT GCTGGTGAGACCATAAGCACCTTGAAATTCGCTGAACGTGTTGCCTCCGTTGAACTTGGT GCAGCCAAGCAAAATAAAGAAGGCAGCGAGATTAGAGAGCTCAAAGAACAGATTGCTTCC CTCAAGGCTGCATTGGCTAAGAAGGAAGGAGAACCAGAGAACATTCTAAGCACACGGTCA AGCCCAAGCATATACAGAATTAGAAAAGGCAATGCAACACCTGCAACTCCTAAAGACAGG CAGCCAATGGAAGAAGTTGGGAGCCTAGAGGTCCAGAATGTCTTCACTCCAGCTCAAAAG AGGTCAAAAATGCATTTGCTTGGCATCCTCACTGAGAACAACTCGTCTAACTCGGTTCAG AATTGCAATGTTCCTCAGAAGGAAATAGGATTAGGTGGTTGGGTTGACAAGATGGCTCTT GGAGACAACCACTTTGAGAACTCTAATTCCATCCTAGAGTTGGAGCCTGACACAGCACAG CTTCCAACTTCTTTTTATCATCAAAGATATAGTCCTGTGCAACAAAGCTGTAGGACCGAA TCAGTACCATCATTGGGCCTACATGGCTTTGATTCTGCTACTAGTTGTTCTAACCAAGAG ATTGTAGTGTCAACCATGGGACTAAAAGCTTCTGGTGTTGCCAATAGAGGCGCCTCAACT GTAAAAAAGTATGAAGCTACATCAACGAGGAGTACAAATCTAGCAAGCAAGTCTCCATTG TTGCAGAAAAAACTGCAAACACCAACCAGGAACAGGAACCAGCTAACTTCGAGCACCATA GGTGGAAGAAGAACACCAAATGGAAAAATTGGCATTGCAAAGTAA

Peptide Sequence

PEP ID	Zm00001d023841_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:10:24262563:24269480:1 gene:Zm00001d023841 transcript:Zm00001d023841_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Sequence	MAMAAAVLEEALRWGGGSVGDDNVAARRAEEAAIRRHEAASWLRKTVGIVCAKDLPEEPS EEEFQLGLRNGIVLCNALNKVQPGAIPKIVGVQSDTAVPADGSALCAYQYFENLRNFVVV IQDFGLPTFEVSDLEKGGKSVRIVDCVLALKSFSESKKTGRQAACKYGGILKPLVSGNYF ILKNCDAFMNKNARIHTEEATLNGFRGEQNLSLDCSPESYEITSDNLSTIIRTILLDKKP EEIPLIVESLLNKVIQEYELRFANQNLMDEEKQNNLTTKEEASFAVNGSNAAQKFHLKAE INFDLQHKQIKGLRGTVSSIKSGMEQLKLHYSEEFTKLGKHLYTISNAASGYHKVLEENR KLYNQIQDLKGNIRVYCRVRPFLPGQISSLSSVAGMEERTITIMTPTKYGKDGNKSFTFN KVFGPAATQDEVFSDMQPLIRSVLDGFNVCIFAYGQTGSGKTYTMSGPKVLTEESLGVNY KALNDLFNLQAQRKGTIDYDISVQMIEIYNEQVRDLLQDSGNRRLEIKNTSQKGLAVPDA SIVPVTSTSDVVELMNQGQKNRAVGSTAINDRSSRSHSCLTVHVQGRDLTSGTVLRGCMH LVDLAGSERVDKSEVVGDRLKEAQYINKSLSALGDVIASLSQKNTHVPYRNSKLTQLLQD SLGGQAKTLMFVHISPELDAAGETISTLKFAERVASVELGAAKQNKEGSEIRELKEQIAS LKAALAKKEGEPENILSTRSSPSIYRIRKGNATPATPKDRQPMEEVGSLEVQNVFTPAQK RSKMHLLGILTENNSSNSVQNCNVPQKEIGLGGWVDKMALGDNHFENSNSILELEPDTAQ LPTSFYHQRYSPVQQSCRTESVPSLGLHGFDSATSCSNQEIVVSTMGLKASGVANRGAST VKKYEATSTRSTNLASKSPLLQKKLQTPTRNRNQLTSSTIGGRRTPNGKIGIAK

Transcript Sequence

Transcript ID	Zm00001d023841_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:24262563:24269480:1 gene:Zm00001d023841 gene_biotype:protein_coding transcript_biotype:protein_coding description:P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Sequence	CCCCCGCAACGTCCACATCATCCCAGTCCCAACCGCTCTCTTCTCTTCGAGCGCCATCGC CGTTCGAAACCAGCGCCGCCCGATCCCGAGAATACCCACCACCCCTCTCCCTCCCTCCCG CTGCCGCCCCCACCTCCAGCAGACGCGACGCGAGCGCAGTCCACCCTCTACGACTACACA CACTCTCTTTCTCTCTCTGTTCTCCTTTCATCTCCACTCGTCCGCTTTGTCGGAACCGTT GCTGGTGGCTCCGGGGTTCTGCGACTGCGCATAGGGAATGGCGATGGCGGCGGCGGTTTT GGAGGAGGCGCTGCGATGGGGTGGAGGAAGCGTTGGGGACGACAACGTGGCCGCGCGCAG GGCAGAGGAGGCCGCGATAAGAAGGCATGAAGCAGCCAGTTGGTTGCGAAAAACGGTTGG GATAGTGTGTGCAAAGGACCTGCCGGAAGAGCCCTCTGAGGAGGAATTCCAGCTTGGTCT GAGAAATGGCATTGTCCTCTGCAACGCACTGAATAAGGTCCAGCCAGGCGCCATACCCAA GATTGTCGGAGTCCAGTCAGATACTGCGGTCCCTGCAGATGGCTCAGCTTTGTGTGCTTA TCAGTACTTCGAAAATCTGCGAAACTTCGTTGTCGTTATACAAGATTTTGGCCTCCCAAC ATTTGAGGTGTCTGATTTGGAAAAGGGTGGCAAAAGTGTTCGAATTGTGGACTGTGTTCT TGCTCTGAAGTCATTCAGTGAAAGTAAGAAAACAGGGAGACAAGCTGCATGTAAATATGG TGGCATTTTGAAGCCTTTGGTTTCCGGAAATTATTTCATACTTAAGAATTGTGATGCTTT TATGAATAAAAATGCGAGAATTCACACAGAAGAGGCTACCCTGAATGGTTTTCGAGGAGA GCAAAACTTATCTCTTGATTGTTCTCCAGAATCCTATGAGATTACTTCAGACAACCTTAG CACGATTATTCGCACAATTCTCTTAGATAAAAAACCAGAAGAAATCCCACTGATTGTTGA ATCACTACTAAACAAAGTTATTCAGGAATACGAGCTTCGCTTTGCAAATCAGAACTTGAT GGATGAAGAGAAGCAAAATAACTTGACTACGAAGGAGGAAGCCAGTTTTGCAGTAAATGG TAGTAATGCAGCTCAAAAGTTCCATCTGAAGGCTGAAATAAATTTTGATCTACAGCACAA ACAGATCAAGGGGTTGAGAGGTACTGTTTCTTCTATCAAGTCTGGAATGGAACAACTGAA ATTGCACTACTCTGAGGAGTTCACTAAACTTGGGAAGCATTTGTACACTATATCCAATGC TGCTTCTGGATACCATAAAGTTCTTGAGGAAAATCGCAAGCTGTACAACCAGATACAGGA TCTTAAAGGAAATATTAGAGTTTATTGTCGAGTGAGGCCTTTCCTACCTGGGCAAATAAG TTCCTTAAGCAGTGTTGCTGGAATGGAAGAAAGAACCATTACAATAATGACTCCTACAAA ATATGGAAAAGATGGAAACAAATCTTTCACTTTCAACAAAGTCTTTGGTCCAGCAGCCAC TCAAGATGAGGTCTTTTCAGATATGCAACCATTGATACGATCAGTTCTTGATGGTTTTAA TGTCTGTATATTTGCATATGGCCAAACAGGATCTGGGAAGACTTATACAATGAGCGGACC TAAAGTTTTAACAGAGGAAAGCCTAGGTGTCAACTATAAAGCATTAAATGACTTATTTAA TCTTCAAGCACAGAGAAAGGGGACAATAGATTATGATATTTCTGTACAGATGATTGAGAT ATACAATGAACAAGTGAGAGATCTCCTTCAGGATAGTGGAAACAGAAGATTAGAAATTAA AAATACATCACAGAAAGGACTTGCGGTTCCAGATGCAAGCATAGTTCCTGTCACATCTAC GTCTGATGTTGTTGAACTGATGAATCAAGGCCAAAAGAATCGTGCAGTGGGTTCAACAGC CATAAATGACCGCAGTAGCCGCTCCCACAGTTGCTTGACTGTTCATGTGCAAGGAAGAGA TTTGACATCTGGGACAGTTTTAAGAGGTTGCATGCATCTGGTCGATCTAGCAGGCAGTGA AAGGGTTGATAAGTCCGAGGTTGTTGGAGATAGACTAAAGGAGGCTCAGTACATAAACAA GTCACTTTCAGCACTGGGAGATGTGATTGCATCCCTTTCCCAAAAGAACACACATGTACC TTACCGAAACAGCAAGCTCACCCAGCTCTTGCAAGATTCACTTGGGGGACAAGCAAAAAC ACTTATGTTTGTTCACATAAGCCCAGAACTTGACGCTGCTGGTGAGACCATAAGCACCTT GAAATTCGCTGAACGTGTTGCCTCCGTTGAACTTGGTGCAGCCAAGCAAAATAAAGAAGG CAGCGAGATTAGAGAGCTCAAAGAACAGATTGCTTCCCTCAAGGCTGCATTGGCTAAGAA GGAAGGAGAACCAGAGAACATTCTAAGCACACGGTCAAGCCCAAGCATATACAGAATTAG AAAAGGCAATGCAACACCTGCAACTCCTAAAGACAGGCAGCCAATGGAAGAAGTTGGGAG CCTAGAGGTCCAGAATGTCTTCACTCCAGCTCAAAAGAGGTCAAAAATGCATTTGCTTGG CATCCTCACTGAGAACAACTCGTCTAACTCGGTTCAGAATTGCAATGTTCCTCAGAAGGA AATAGGATTAGGTGGTTGGGTTGACAAGATGGCTCTTGGAGACAACCACTTTGAGAACTC TAATTCCATCCTAGAGTTGGAGCCTGACACAGCACAGCTTCCAACTTCTTTTTATCATCA AAGATATAGTCCTGTGCAACAAAGCTGTAGGACCGAATCAGTACCATCATTGGGCCTACA TGGCTTTGATTCTGCTACTAGTTGTTCTAACCAAGAGATTGTAGTGTCAACCATGGGACT AAAAGCTTCTGGTGTTGCCAATAGAGGCGCCTCAACTGTAAAAAAGTATGAAGCTACATC AACGAGGAGTACAAATCTAGCAAGCAAGTCTCCATTGTTGCAGAAAAAACTGCAAACACC AACCAGGAACAGGAACCAGCTAACTTCGAGCACCATAGGTGGAAGAAGAACACCAAATGG AAAAATTGGCATTGCAAAGTAATCAATTAATGTGAAGGCAGATTTGCTGTGACCATGCTT AGAATGGAAAAATTGGCATTGCAAAGTAATCAATTAATGTCAAGGTGGGATAGCACGGAG CCTAAAAGGACTGCGGTTTTTGAACCTGCAGAAGGATCAAGATCAATCATGTAAACTGAT GCACATTCCGATAGGTAGCACATTTTATTTATTACATTGAAGTTGGAAACAGACACCAAA GAGGACAGAAAGATGATAAATATGAAGGAAATTCGAATTGAGGCTTCTGTACATTTTCCA CACTTATAAAGTAATGTTGTATCATGTGCCTATTAGCCATGACACATCATCACCTGAAAG TTGCTTGTATTAGACATGTGCTAAGTTTACAGTTTCTCTGTCTCATGTATGTTACCCTTT CTCATAATGGATCGCCACTCACAGAC