Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d023813_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:22948296:22951424:-1 gene:Zm00001d023813 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	ATGGCTCCGTGCTGGTTGCAGGTGGCTCTGGCATCGATGGTGGCAGTTCTGGTACTCGGC CTCGCCTGTGCAGAGGCGGAGCCACAGTGCACGCGGCGCCGCCCGCCCGCGCCGCCGCGG CCGCACAGCGTGACGATCACCGAGTTCGGGGCCGTTGGTGACGGCGTCACCCTCAACACC GTGTCCTTCCAGAACGCCGTCTTCTACCTGCGCTCCTTCGCCGACAAGGGCGGCGCGCAG CTGTACATTCCCAGGGGCCGGTGGCTCACCGGCAGTTTCAATCTCACCAGCCACCTTACC CTCTTCCTGGAGAGTGGCGCTGTCATCGTTGGCACGCAGGACGTTTCACAGTGGCCTGTT GTCGAACCTTTGCCATCATATGGACGAGGAATGGACCTTCCAGGTTCGAGGCATCGAAGC TTAATAAACGGGCAGAATCTAGTTGATGTTGTAATTACGGGAAACAATGGAACAATCGAT GGCCAGGGTTCTACATGGTGGAACTGGTTTCGTTCGAATAAGTTGAACTATAGTCGCCCT CATCTTGTGGAGTTTGTGGACTCTGAGCAAATCGTCATTTCGAACATAACATTTTTAAAT TCCCCTGCTTGGAGTATACATCCAGTGTATTGCAGCAATGTAGTGGTCCATAGTGTCACA ATTCAGACTTCATTGGATGCTCCACTTAATCATGGAATCGTTCCAGATTCATGCTCAAAT ATGTGCATCGAGGACAGCAGTATCAGTGTTAGCCACGACGCCATATCACTAAAAAGCGGG TGGGACAAGCAAGGCATTGCTTTCGGGAGGCCAACCTCAGACATCCACATAAGCAGACTG GATCTGCAGTCCTCACTGGGCGCCGCTCTCGCGTTCGGGAGCGAGATGTCGGGCGGGATC TCGGACATCCATGCGGACCGCCTCCTCATCCACTCTTCGTCCAGAGGCGTCTTCTTCAAG ACCGCGCCGGGACGCGGAGGCTATATCAGAGACACCGTGATCTCAGACGTCCAGATGGAA GACGTCGACGTCGCCATCGCATTCACCGGTGACTGGCCAAGCCACCCAGATGACCAGTTC GACCCGGCCGCGCTCCCGGTGGTCAGCCACATCACCCTGAAGAACATGACTGGAACAAGA ATCTCGGTCGCTGGCGTTTTGTCAGGAATCGCCGGCGACCCGTTCACCGACATCTGCCTC TCCAACATCAACTTCTCACTGGCCGATTCGGCCAGTCCCACCTCCCACTGGTCTTGCTCC AACGTCTCCGGATACTCCGAGCTGGTCTTCCCCGAGCCTTGCCTGGATCTGCAGACCCAA TCCTCAGACGCTTCCGTCTGCTCCACCCTCCCTAGCTTCCACGCCGCCGCCATTGCAGCA GCGTAA

Peptide Sequence

PEP ID	Zm00001d023813_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:22948296:22951424:-1 gene:Zm00001d023813 transcript:Zm00001d023813_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	MAPCWLQVALASMVAVLVLGLACAEAEPQCTRRRPPAPPRPHSVTITEFGAVGDGVTLNT VSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTLFLESGAVIVGTQDVSQWPV VEPLPSYGRGMDLPGSRHRSLINGQNLVDVVITGNNGTIDGQGSTWWNWFRSNKLNYSRP HLVEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQTSLDAPLNHGIVPDSCSN MCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAALAFGSEMSGGI SDIHADRLLIHSSSRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFTGDWPSHPDDQF DPAALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLADSASPTSHWSCS NVSGYSELVFPEPCLDLQTQSSDASVCSTLPSFHAAAIAAA

Transcript Sequence

Transcript ID	Zm00001d023813_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:22948296:22951424:-1 gene:Zm00001d023813 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	ATGGCTCCGTGCTGGTTGCAGGTGGCTCTGGCATCGATGGTGGCAGTTCTGGTACTCGGC CTCGCCTGTGCAGAGGCGGAGCCACAGTGCACGCGGCGCCGCCCGCCCGCGCCGCCGCGG CCGCACAGCGTGACGATCACCGAGTTCGGGGCCGTTGGTGACGGCGTCACCCTCAACACC GTGTCCTTCCAGAACGCCGTCTTCTACCTGCGCTCCTTCGCCGACAAGGGCGGCGCGCAG CTGTACATTCCCAGGGGCCGGTGGCTCACCGGCAGTTTCAATCTCACCAGCCACCTTACC CTCTTCCTGGAGAGTGGCGCTGTCATCGTTGGCACGCAGGACGTTTCACAGTGGCCTGTT GTCGAACCTTTGCCATCATATGGACGAGGAATGGACCTTCCAGGTTCGAGGCATCGAAGC TTAATAAACGGGCAGAATCTAGTTGATGTTGTAATTACGGGAAACAATGGAACAATCGAT GGCCAGGGTTCTACATGGTGGAACTGGTTTCGTTCGAATAAGTTGAACTATAGTCGCCCT CATCTTGTGGAGTTTGTGGACTCTGAGCAAATCGTCATTTCGAACATAACATTTTTAAAT TCCCCTGCTTGGAGTATACATCCAGTGTATTGCAGCAATGTAGTGGTCCATAGTGTCACA ATTCAGACTTCATTGGATGCTCCACTTAATCATGGAATCGTTCCAGATTCATGCTCAAAT ATGTGCATCGAGGACAGCAGTATCAGTGTTAGCCACGACGCCATATCACTAAAAAGCGGG TGGGACAAGCAAGGCATTGCTTTCGGGAGGCCAACCTCAGACATCCACATAAGCAGACTG GATCTGCAGTCCTCACTGGGCGCCGCTCTCGCGTTCGGGAGCGAGATGTCGGGCGGGATC TCGGACATCCATGCGGACCGCCTCCTCATCCACTCTTCGTCCAGAGGCGTCTTCTTCAAG ACCGCGCCGGGACGCGGAGGCTATATCAGAGACACCGTGATCTCAGACGTCCAGATGGAA GACGTCGACGTCGCCATCGCATTCACCGGTGACTGGCCAAGCCACCCAGATGACCAGTTC GACCCGGCCGCGCTCCCGGTGGTCAGCCACATCACCCTGAAGAACATGACTGGAACAAGA ATCTCGGTCGCTGGCGTTTTGTCAGGAATCGCCGGCGACCCGTTCACCGACATCTGCCTC TCCAACATCAACTTCTCACTGGCCGATTCGGCCAGTCCCACCTCCCACTGGTCTTGCTCC AACGTCTCCGGATACTCCGAGCTGGTCTTCCCCGAGCCTTGCCTGGATCTGCAGACCCAA TCCTCAGACGCTTCCGTCTGCTCCACCCTCCCTAGCTTCCACGCCGCCGCCATTGCAGCA GCGTAAATGCACAGAGAGTACAAAGTGTCCATCCTTTTTCCTGTTCCCGGTCCCCTGTAC ACTTCAGAGGATCTCTCAAGCCGCCTTTTCCTCCCCCGACAATTCTTTGAAGCTATAGGC GCGCCCCTGTCGTTGAAGAAAAGAATCGTTCACCGTTTTTCTCCGGCCGTCGGCTTCGAG GGCTCAGCTGCATCGCCTTTCTTGCGGGAGGCAAGCCTGGCGGCGGACGGTCGACATCGA GCTGTTAATTTGCTTGTACAGTTATGATTTCTTCATTCAATCTGTAAGAAGGAATTTTTG TGGTAGTAGAGGGTTGAGTCGAGTCCAGAGAGTTGCTTCATACGATTGTCGATTTGGTGA ATAAAACACATGATGAATTCATGATCCAGTGGCTCTGTATACATCCTGTCATCCTTGTGG GTACATCCATCCATGATCCATCCAATCTAAC