Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d023741_T018
CDS Infomation

cds chromosome:B73_RefGen_v4:10:18389151:18406345:-1 gene:Zm00001d023741 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alanine--tRNA ligase
Sequence

ATGGCCCACGACCCGACCTTGACGCTACCCGAACCCAACCCGACCCGATGTTTGCTTGTA
AATGTTTTTGTCCAACTGATGGGTGATGTATTTCCCGAGTTAAAAGACAACGAAAAGAAG
ATCAAATGTATTATTAGAGATGAAGAAGAAAGCTTTGAGAACACTCTAGCAAAGGGTTAT
GAAAAATTTAAGAAAGCTGCAGACGCTGTTAAGGATAATGGTGGAACTATACTTAGTGGA
CAGGCATTTATTCTTTGGGACACTTATGGTTATCCAATTGATTTGACTGAGGTCATGGCA
ATCGACTATGGGCTAACTGTTGATAAGAAGGGGTTTAATGCTTCTATGGAAGAAGCGAGG
CAAAAAGCTAGAAATGCTCGTAACAAGTCTGGAGGGAACTCTATTGCTATGGATGCGAAT
GCTACAGCGCAGTTGCGCAAACTGGGGCTTGCCAGCACGGACGATAGCCCAAAGTTTCTG
TGGCCCAAGGAACATGAAAGCGTGGTGAAGGCTATCTATACTGGCTCAGAATACATTACT
ACAGCTACTGGTGATGGGGACTTTGGTCTTGTGCTGGAAAGTACAAGTTTCTATGCTGAA
CAAGGAGGCCAGATATTTGACACTGGGAGCATTGAGGGGTCATTTGGAACTTTCAATGTG
AACAACGTCCAAGTGTTTGCTGGCTATGTTCTACATATTGGCTCATTTACAAAAGGTTCG
AAGGTTTTGTCTCTTGGAGATAGTGTGATATGCAAGGTTGATTACAACCGGCGCACACTG
ATTGCTCCAAATCATACGTGTACCCACATGTTGAACTTTGCTCTAAGGGAAGTACTTGGT
GATCATGTTGACCAGAAGGGTTCAATTGTTCTACCAGAGAAGCTAAGATTTGATTTCTCT
CATGGAAAACCTGTCCAGCCTGAAGATCTGAGGAAAATCGAGTTCATAGTGAACCAGCAA
ATAAAGGACGAGCTGGGTGTGTATGCACTTGAAATAAAACTAGAGGATGCGAAGCGCATA
AATGGTCTTCGTGCTGTGTTTGGTGAAATCTACCCTGATCCAGTAAGAGTTGTATCAGTT
GGTCGCAAAGTTGAAGATCTGCTTGCAGATCCTGATAGCAAAGAGTGGCTATCCATATCG
ACTGAACTATGTGGAGGTACACATATCACAAACACAAGAGATGCTAAAGCATTTGCACTC
TTATCTGAGGAGGGTATTGCAAAAGGAGTTAGGAGGATAACAGCCGTGACTGCTGGATGT
GCCACCCAGGCTATGGAGTTGGCGTCATCTATCGATTCTGATATCAATAAAGCATCTCAG
TTGGAGGGAGCTTTGTTGGAAAAGAAAATTGCTTCCATCAAGAGTGGGCTGGATGCAGCT
GCTATCCCTGCTGCGAGAAAAGCTGATTTGAGAGGCAAGGTTTCAAAGTTAGAGGACGAA
CTTAGGAAGGCAAAGAAGAAAATGGGGGAGCAAAATATACAAAAGGCTGTGAAGTCCGCA
ATGGATGCTGCAGAAGCTGCTCTTTCAGGAAATAAACCGTTTTGTGTTACTCATGTGGAT
GTGGGTCTTGATACCACGGCTGTCCGTGAGGCGGTTATCAAAGTCATGGACCAGAAGGGT
TTGCCTATAATGTTATTCAGCACCGATGAGGCATCAAACAAAGCCGTTATCTATGCTGGT
GTGCCTCCCAATGCTCCTAGCGGCTTCAAGGTGTTGGACTGGCTAACACCTTCAATTGCG
CCACTCAAGGGAAGAGGCGGTGGCGGCAAGAACGGCGTCGCCCAGGGCCAGGGGAGTGAC
GCTTCTCAGCTCAAGGAAGCAATGGCACTTGCGAACAGCATTGCTTCAATGAAGCTCTGC
TGA

Peptide Sequence

PEP ID

Zm00001d023741_P018
PEP Infomation

pep chromosome:B73_RefGen_v4:10:18389151:18406345:-1 gene:Zm00001d023741 transcript:Zm00001d023741_T018 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alanine--tRNA ligase
Sequence

MAHDPTLTLPEPNPTRCLLVNVFVQLMGDVFPELKDNEKKIKCIIRDEEESFENTLAKGY
EKFKKAADAVKDNGGTILSGQAFILWDTYGYPIDLTEVMAIDYGLTVDKKGFNASMEEAR
QKARNARNKSGGNSIAMDANATAQLRKLGLASTDDSPKFLWPKEHESVVKAIYTGSEYIT
TATGDGDFGLVLESTSFYAEQGGQIFDTGSIEGSFGTFNVNNVQVFAGYVLHIGSFTKGS
KVLSLGDSVICKVDYNRRTLIAPNHTCTHMLNFALREVLGDHVDQKGSIVLPEKLRFDFS
HGKPVQPEDLRKIEFIVNQQIKDELGVYALEIKLEDAKRINGLRAVFGEIYPDPVRVVSV
GRKVEDLLADPDSKEWLSISTELCGGTHITNTRDAKAFALLSEEGIAKGVRRITAVTAGC
ATQAMELASSIDSDINKASQLEGALLEKKIASIKSGLDAAAIPAARKADLRGKVSKLEDE
LRKAKKKMGEQNIQKAVKSAMDAAEAALSGNKPFCVTHVDVGLDTTAVREAVIKVMDQKG
LPIMLFSTDEASNKAVIYAGVPPNAPSGFKVLDWLTPSIAPLKGRGGGGKNGVAQGQGSD
ASQLKEAMALANSIASMKLC

Transcript Sequence

Transcript ID

Zm00001d023741_T018
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:18389151:18406345:-1 gene:Zm00001d023741 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alanine--tRNA ligase
Sequence

AGACGAAGCCTAGATGGGTGGATGCTGACCGTGCCGACCCTCCCACGCGCGTGCCGCCTG
CTTCGTCTCTTCACTCGTCTCGAAGCTAGGGTTTTGCCCGCCGCCACCATCCTAGTTTCC
TTCTCGTCATCGTTCTCATCTTCCCCAGCCGCCGCCCCGCCTCAGATGGATCCGTCGCCG
GCGTGGCCGTCCCGGCGGATCCGCCAGGAGTTCTTAACCTTCTTCGAGTCCAAGGCACAT
ACGAGGTGGCCGTCGAGTCCCGTGGTCCCCGTCGACGACCCCACGCTGCTGTTCGCCAAC
GCTGGAATGAACCAGTTCAAGCCGGTCTTCCTCGGCACAGCGGCGCCGGACTCGCCGCTC
GGCCGCCTGCACCGTGCCTGTAACACCCAAAAGTGCATCCGCGCCGGCGGGAAGCACAAC
GACCTCGACGACGTGGGGAATGACACCTACCACCATACCTTCTTCGAGATGCTTGGGAAC
TGGTCTTTCGGGGACTATTTCAAGGAGGAGGCCATCAGATGGGCCTGGGAGCTTCTCACC
CAGGTATATAAATTGCCCACCGATAGAATTTATGCCACATACTTTGGTGGTGATGTGAAA
TCTGGTCTTGGTGCTGATGATGAATCGAAGGACATTTGGTTGAAATATCTACCGAAAGAA
AAGGTTCTGCCTTTTGGCTGCAAGGACAACTTTTGGGAGATGGGTGACACTGGTCCTTGT
GGACCATGTACTGAAATTCATTTTGACCGTATTGGCAACCGTGATGCTGCGTCCTTGGTT
AACAATGATGATCCAACTTGTATTGAGATATGGAACCTTGTATTCATTCAGTTCAATAGG
GAGGCAGATGGCACATTGAGACCTTTGCCAGCAAAACATGTGGACACTGGGCTGGGCTTT
GAGCGTTTAACTTCTATTCTTCAGAATAAAATGAGCAATTATGATACAGATATATTCATG
CCAATATTTGATGCCATCCACCAATTGGCTGGCGATGGAATTCAGCCATACTCTGGTAAA
TTAGGTTCTGATGATATTGGCAAAGTTGATATGGCTTACAGAGTAGTAGCTGACCACATA
AGAACCCTTTCTTTCGCTATTGCTGATGGTTCTCAACCTGGTAATGAGGGAAGAGAGTAT
GTTCTGAGGCGCATACTTAGGCGAGCTGTTCACTTTGGTCATCAGAAATTGAAGGCAAAG
CAAAGTTTTTTTAGCTCTTTTTGCTAGTGTTAGTTTTACTTGTGACAGTTTTACTCTCTT
GACACAGCCGGAGGGCCTCTAGCGTAATGGTTAAGGCTTCCGAGTAGCACCGCCCGCTCT
CGGATCGATATCCTGCGCGACCCTCCGGCTGGGTCGTTGCAGAGTGGGCAGTTGATCGGC
CCGTTAGTGATGGGGGCAAAGTAGACTTGATCATCGGCCACCCGACCCGACCAACCTGAC
CCGACCCGCCCGAAAAAACCCGGCCCGACTCGATCCGACCAATGCAATGGGCAGGTCCGG
GCCATAATTTTTGACCCGTAATAATTCACGGGCCGGATACGGGCCGTGATTTTTGACCCA
AAACCCGACCCAACCCGAAAAAACCCGACCCAACCCGACACGTCAAACAGGGAGGCACGA
GCCTACCCGACACTAGACACAGGTTGGGTATGGGCCGTGATAAATGGCCCACGACCCGAC
CTTGACGCTACCCGAACCCAACCCGACCCGATGTTTGCTTGTAAATGTTTTTGTCCAACT
GATGGGTGATGTATTTCCCGAGTTAAAAGACAACGAAAAGAAGATCAAATGTATTATTAG
AGATGAAGAAGAAAGCTTTGAGAACACTCTAGCAAAGGGTTATGAAAAATTTAAGAAAGC
TGCAGACGCTGTTAAGGATAATGGTGGAACTATACTTAGTGGACAGGCATTTATTCTTTG
GGACACTTATGGTTATCCAATTGATTTGACTGAGGTCATGGCAATCGACTATGGGCTAAC
TGTTGATAAGAAGGGGTTTAATGCTTCTATGGAAGAAGCGAGGCAAAAAGCTAGAAATGC
TCGTAACAAGTCTGGAGGGAACTCTATTGCTATGGATGCGAATGCTACAGCGCAGTTGCG
CAAACTGGGGCTTGCCAGCACGGACGATAGCCCAAAGTTTCTGTGGCCCAAGGAACATGA
AAGCGTGGTGAAGGCTATCTATACTGGCTCAGAATACATTACTACAGCTACTGGTGATGG
GGACTTTGGTCTTGTGCTGGAAAGTACAAGTTTCTATGCTGAACAAGGAGGCCAGATATT
TGACACTGGGAGCATTGAGGGGTCATTTGGAACTTTCAATGTGAACAACGTCCAAGTGTT
TGCTGGCTATGTTCTACATATTGGCTCATTTACAAAAGGTTCGAAGGTTTTGTCTCTTGG
AGATAGTGTGATATGCAAGGTTGATTACAACCGGCGCACACTGATTGCTCCAAATCATAC
GTGTACCCACATGTTGAACTTTGCTCTAAGGGAAGTACTTGGTGATCATGTTGACCAGAA
GGGTTCAATTGTTCTACCAGAGAAGCTAAGATTTGATTTCTCTCATGGAAAACCTGTCCA
GCCTGAAGATCTGAGGAAAATCGAGTTCATAGTGAACCAGCAAATAAAGGACGAGCTGGG
TGTGTATGCACTTGAAATAAAACTAGAGGATGCGAAGCGCATAAATGGTCTTCGTGCTGT
GTTTGGTGAAATCTACCCTGATCCAGTAAGAGTTGTATCAGTTGGTCGCAAAGTTGAAGA
TCTGCTTGCAGATCCTGATAGCAAAGAGTGGCTATCCATATCGACTGAACTATGTGGAGG
TACACATATCACAAACACAAGAGATGCTAAAGCATTTGCACTCTTATCTGAGGAGGGTAT
TGCAAAAGGAGTTAGGAGGATAACAGCCGTGACTGCTGGATGTGCCACCCAGGCTATGGA
GTTGGCGTCATCTATCGATTCTGATATCAATAAAGCATCTCAGTTGGAGGGAGCTTTGTT
GGAAAAGAAAATTGCTTCCATCAAGAGTGGGCTGGATGCAGCTGCTATCCCTGCTGCGAG
AAAAGCTGATTTGAGAGGCAAGGTTTCAAAGTTAGAGGACGAACTTAGGAAGGCAAAGAA
GAAAATGGGGGAGCAAAATATACAAAAGGCTGTGAAGTCCGCAATGGATGCTGCAGAAGC
TGCTCTTTCAGGAAATAAACCGTTTTGTGTTACTCATGTGGATGTGGGTCTTGATACCAC
GGCTGTCCGTGAGGCGGTTATCAAAGTCATGGACCAGAAGGGTTTGCCTATAATGTTATT
CAGCACCGATGAGGCATCAAACAAAGCCGTTATCTATGCTGGTGTGCCTCCCAATGCTCC
TAGCGGCTTCAAGGTGTTGGACTGGCTAACACCTTCAATTGCGCCACTCAAGGGAAGAGG
CGGTGGCGGCAAGAACGGCGTCGCCCAGGGCCAGGGGAGTGACGCTTCTCAGCTCAAGGA
AGCAATGGCACTTGCGAACAGCATTGCTTCAATGAAGCTCTGCTGATTGGTGGTAGTAAC
TGGTGCACTGCCCATGGAACTCATGCGTGGCTGCTGCTGGATTACTCTTTGATTTTAGCT
TTCTATTTACCCATTATACTTAAACAGAAGTTCAATGGTGCTTGCAGTTTCATTTATACT
TACCATACAATTGGAAGCACAGGACATGTAACAGTATAAAGCTTGTTGTGTGCCCGAT