Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d023710_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:10:16560023:16565927:1 gene:Zm00001d023710 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small RNA degrading nuclease 5
Sequence	ATGTCGACCGCATCCGGCAACGGCAACGGCGGCTCCTCCTCTTCCATGTTATACGACTTG TACGGCCCTAATGCAAAGCCTGATGTGGTTTTTAAGGAGGCTGCTTTAAACTCTACGTTA AATCTGCAGGATGTTCAGGGTCTAGTTACTTGGGTTATTGGTGATGGCATGCTGCCTTCT TGGGTGTTTGTTAAGAACAAACCTCTTATACCCAAAGTTGTCCTACTATATGTTCCTGGC CTTGATGCAACTTTATATATGTCACACACTCGACTTCTTTCTTCTCTGAAAGAATTATGT GGCAATCCAAAACCTGTTTTAGCTTCAAGCCGTATGCCGGATGAGAGGCACACCATTGAT GCGCTCCTAACCTGCAGAGTAAAGAGAAAGCGTGATGTAAAAACATCAAATGAGTCATCT AAACCTGACATAGATGGAAAACTATCAAGTCTGGATGATCTTGGGGACATACCATTCCCT GTTACATATTACACTCTCTCAGAGAAAGACTTGGAAGATAATGGCTACTCTTTCAATTTA CCAGGTTTTGTCCCTACTGTTTCAGCTCCTTCAGGTTCCTCGCCACATAAAGTTCTTGCA CTTGATTGTGAAATGTGTGTGACAAAAGCTGGATTTGAGCTCACAAGAGTGACATTAATT GATATTAAAGGATTGGTGGTGCTAGATAGACTAGTTAAGCCTGCTAATTCAATCATTGAT TACAATACAAGGTTCAGTGGAATCACTGCTGAGATGTTGGCTGACGTGTCCACAACCCTG CAGGAAATTCAGGAAGAGTTTGTTGGACTTGTATATAAAGAAACAATTCTTGTTGGGCAT TCCTTGGAAAATGACCTTATGGCATTACAGATATCCCATGGTTTAATCATCGATACAGCT GTTTTGTACAAGTATAAGCGAGGGTCTCGCTGTAAGATTGCTTTGCGTGTCTTGACGAGA AAGTTTCTCGGCCGGGAGATCCAGAACACAGGATCTGGACATGACAGTGTGGAAGATGCT AAAGCTGCTCTAGAACTTGCTATATTGAAAATCAAACATGGTCCTGATTTTGGTTTTCAA CCATCGTTGTCAAGGCAGAAATTGACATCTATACTGCATGAGAGTGGGAAAAAATGCTCC CTTGTTGATGATGTATCTGTTCTCGAGCGGTATTCAGATACTTCTTGCAATTCAATTGCT GTTTTTTGTGATGATGATGCCCTCTCCAGATCAATGAAGGAGGTGAAGAATAACAAAGTC ACCTTCATTTGGACTCAGTTCTCAGGATTGATTTCTTACTTCCACCGAAGAGCTCAAGAT CCAGAAAAGTTGAAATCATGTGTCGCAGAGGCTATTGCATTAAAAACATGTGATGGAAAA ACTGCTTCAAAAGAAGCAAGAAGTAAAATTTGTCCTGAATTAAAGGAAATTCTGTGTGGA TTGGATAAAAAGATAAAGAAATTATATGGTGCCCTGCCCGAGAATGCTATGCTTATTGTA TGCACTGGCCATGGTGATACTCCTCTAGTACAAAGATTACGGAAAATGCTTCACCATGAA GAAGAAACAATAGACAGCCGAGAAACTATTGTTCAAGCTTTGGGAGATTTACAAGCCCAA GCCGAAGTTGCTCTATGCTTCTGCTGCGTCAAACGTTAA

Peptide Sequence

PEP ID	Zm00001d023710_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:10:16560023:16565927:1 gene:Zm00001d023710 transcript:Zm00001d023710_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small RNA degrading nuclease 5
Sequence	MSTASGNGNGGSSSSMLYDLYGPNAKPDVVFKEAALNSTLNLQDVQGLVTWVIGDGMLPS WVFVKNKPLIPKVVLLYVPGLDATLYMSHTRLLSSLKELCGNPKPVLASSRMPDERHTID ALLTCRVKRKRDVKTSNESSKPDIDGKLSSLDDLGDIPFPVTYYTLSEKDLEDNGYSFNL PGFVPTVSAPSGSSPHKVLALDCEMCVTKAGFELTRVTLIDIKGLVVLDRLVKPANSIID YNTRFSGITAEMLADVSTTLQEIQEEFVGLVYKETILVGHSLENDLMALQISHGLIIDTA VLYKYKRGSRCKIALRVLTRKFLGREIQNTGSGHDSVEDAKAALELAILKIKHGPDFGFQ PSLSRQKLTSILHESGKKCSLVDDVSVLERYSDTSCNSIAVFCDDDALSRSMKEVKNNKV TFIWTQFSGLISYFHRRAQDPEKLKSCVAEAIALKTCDGKTASKEARSKICPELKEILCG LDKKIKKLYGALPENAMLIVCTGHGDTPLVQRLRKMLHHEEETIDSRETIVQALGDLQAQ AEVALCFCCVKR

Transcript Sequence

Transcript ID	Zm00001d023710_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:16560023:16565927:1 gene:Zm00001d023710 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small RNA degrading nuclease 5
Sequence	GCAAGTTTTGAGAGCGGCAAAGCGTTAGGCGTTAGGGCATCCACCTCGTCGTAGGCGGCG GTCTCCATGTCGACCGCATCCGGCAACGGCAACGGCGGCTCCTCCTCTTCCATGTTATAC GACTTGTACGGCCCTAATGCAAAGCCTGATGTGGTTTTTAAGGAGGCTGCTTTAAACTCT ACGTTAAATCTGCAGGATGTTCAGGGTCTAGTTACTTGGGTTATTGGTGATGGCATGCTG CCTTCTTGGGTGTTTGTTAAGAACAAACCTCTTATACCCAAAGTTGTCCTACTATATGTT CCTGGCCTTGATGCAACTTTATATATGTCACACACTCGACTTCTTTCTTCTCTGAAAGAA TTATGTGGCAATCCAAAACCTGTTTTAGCTTCAAGCCGTATGCCGGATGAGAGGCACACC ATTGATGCGCTCCTAACCTGCAGAGTAAAGAGAAAGCGTGATGTAAAAACATCAAATGAG TCATCTAAACCTGACATAGATGGAAAACTATCAAGTCTGGATGATCTTGGGGACATACCA TTCCCTGTTACATATTACACTCTCTCAGAGAAAGACTTGGAAGATAATGGCTACTCTTTC AATTTACCAGGTTTTGTCCCTACTGTTTCAGCTCCTTCAGGTTCCTCGCCACATAAAGTT CTTGCACTTGATTGTGAAATGTGTGTGACAAAAGCTGGATTTGAGCTCACAAGAGTGACA TTAATTGATATTAAAGGATTGGTGGTGCTAGATAGACTAGTTAAGCCTGCTAATTCAATC ATTGATTACAATACAAGGTTCAGTGGAATCACTGCTGAGATGTTGGCTGACGTGTCCACA ACCCTGCAGGAAATTCAGGAAGAGTTTGTTGGACTTGTATATAAAGAAACAATTCTTGTT GGGCATTCCTTGGAAAATGACCTTATGGCATTACAGATATCCCATGGTTTAATCATCGAT ACAGCTGTTTTGTACAAGTATAAGCGAGGGTCTCGCTGTAAGATTGCTTTGCGTGTCTTG ACGAGAAAGTTTCTCGGCCGGGAGATCCAGAACACAGGATCTGGACATGACAGTGTGGAA GATGCTAAAGCTGCTCTAGAACTTGCTATATTGAAAATCAAACATGGTCCTGATTTTGGT TTTCAACCATCGTTGTCAAGGCAGAAATTGACATCTATACTGCATGAGAGTGGGAAAAAA TGCTCCCTTGTTGATGATGTATCTGTTCTCGAGCGGTATTCAGATACTTCTTGCAATTCA ATTGCTGTTTTTTGTGATGATGATGCCCTCTCCAGATCAATGAAGGAGGTGAAGAATAAC AAAGTCACCTTCATTTGGACTCAGTTCTCAGGATTGATTTCTTACTTCCACCGAAGAGCT CAAGATCCAGAAAAGTTGAAATCATGTGTCGCAGAGGCTATTGCATTAAAAACATGTGAT GGAAAAACTGCTTCAAAAGAAGCAAGAAGTAAAATTTGTCCTGAATTAAAGGAAATTCTG TGTGGATTGGATAAAAAGATAAAGAAATTATATGGTGCCCTGCCCGAGAATGCTATGCTT ATTGTATGCACTGGCCATGGTGATACTCCTCTAGTACAAAGATTACGGAAAATGCTTCAC CATGAAGAAGAAACAATAGACAGCCGAGAAACTATTGTTCAAGCTTTGGGAGATTTACAA GCCCAAGCCGAAGTTGCTCTATGCTTCTGCTGCGTCAAACGTTAACTAACACTGCACTGT TCTGAATTGTTTTTTGTTGGCAGGCATCTTTGAATTAGTGTGCTGATGGGTATGGCTTCG GCGATTATAGGAGGGTGTCAGGCATGCATGCTGACCCGCTGATGTGAAAAGTTCCGGCAG GCAGAGATTGAATTTTGGAAGCTATTCTCATGCTGTCTTTTTTTTCTTTTTTCTGTCAGA TACTATGATCAGGCTGTAGATGTCAGCGTAAGGCATAGTGATGCATTATCAGAACTGGTC TTTCGGTAGCAGGCCAGCATGTCAGCATATTAATAGGATCATTTTTCAGATGAATATACG GATCGCAGAGGAATGTAGGAAACTATTGTAACAGCCATATTATTGTGATAATTAAAACCA AGTTCTG