Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d023659_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:10:13876614:13882418:1 gene:Zm00001d023659 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 28 description:Auxin response factor 2
Sequence

ATGGTGGCGGCTGCAGCGGCGGCCGGCGGCGGCGCCGACGCGGGATGCGGAGGCGGAGGC
GGAGGCGGAGGGAAGGACGCGCTGTTCGTGGAGCTGTGGAAGGCCTGCGCGGGGCCGCTG
TCCAGCGTGCCGCTACTCGGGGAGAAGGTCTACTACTTCCCGCAGGGCCACATCGAGCAG
GTGGAGGCATCGACAAACCATCTTGCCGAGCATCAGGGCACGCCCCTCTACAACCTGCCA
TGGAAGATACCCTGCAAGCTCATGAACATGGAGCTGAAGGCTGAGCCGGATACTGATGAG
GTGTACGCCCAACTCACCCTGCTCCCTGATAAGAAGCAAGATGAGAATACATCTGCAAGA
GTGGAGAATGAGGAGGCAGAGGAGGAGGTGGTGCCTCATGTGCCACCAGCCACAAGTGAG
GGGCTTCGCATCCATTCCTTCTGCAAGACATTGACTGCCTCAGACACAAGCACACATGGT
GGTTTCTCAGTGTTGCGCCGGCATGCAGATGAGTGCCTCCCACCACTGGATATGAGTCAA
CATCCCCCAAATCAAGAATTGGTGGCCAAGGACCTGCATGGGGTTGAGTGGCGGTTCCGT
CACATCTTTCGAGGTCAGCCACGGAGACACCTCCTTCAGAGTGGTTGGAGTGTTTTTGTT
AGTGCCAAGCGTCTTGTTGCGGGGGATGCATTCATATTTCTCAGAGGTGAGAATGGGGAG
TTACGTGTTGGAGTTCGGCGTGCACTGAGGCACCAAACCACTATCCCATCTTCAGTCATA
TCAAGCCACAGTATGCATCTTGGTGTTCTTGCAACAGCATGGCATGCAGTGAACACTGGG
AGTATGTTCACTGTCTACTACAAACCAAGGACTAGTCCAGCTGAATTTGTGGTTTCACGA
GCTAGGTACTGTGAATCACTGAAACGAAATTATTCAATAGGGATGAGGTTTAGGATGAGA
TTTGAAGGTGAAGAAGCGGCAGAGCAAAGATTCACTGGCACAATAGTTGGAATATGTGTT
TCTGATCCATCTGGCTGGGCTGACTCGAAATGGCGTTCCCTTAAGGTGAGATGGGATGAA
GCTTCTTCTGTTCCTCGTCCTGAAAGAGTTTCTCCTTGGCAAATAGAACCTGCTGTTAGC
CCATCTCCTGTGAACCCTCTTCCAGTCAGATTCAAGAGGTCTCGTTCAAGTGTTAACGCC
TCACCATCTGATGTGTCTACTGTAAACAGAGAAGTTGCTTCTAAAGTCATGGTAGAGTCG
CAACAGAATAATCTCCCAAGGGCCTTGCACAATCAAGGAAGGACACAATTGACAGGTCGA
TACCGTGATAGCACTGATGTGAAGACTGCTCAGGATCTTACCATGTGGTCTTCAGGAACT
GAGCAACAGAGAAACAATATTGCTGCCCAGACAAAACGATGTCTGGAGGGTTGGACGCAA
TCTAGAACTCCAGAAGGTTACAATCAACTGTTCTCGGCATTTCAACCACTGAAGGATGCA
CATAATCCACTTCGTCCTTTTCCTAATAAAATATCTGGGACTCGCTCAAGTACCTGGGTC
ACAGCCGATGCCCGTTATCCAGCTCAACAAGCCAATCACAACATGTTACATGGCACATTG
TCTTTTATGCCTCATAGCAGTGGTTTTAGGATGATTCAACAGAATAATCTAGTGACACCT
GAAGCTGCAAATTTTACTGGGAAATCAGCTTTCACTTCACTTCAGGGCCATGTCACTGAT
CAGTGCTCCACAGGCTGGTTTGGATCTATTGAGTCAAATTCCCACACAGACCATGCATCG
TCAAGTTTGATCAGGTCCCAGCCTTTGGTTATTGGAAATGATGTTCAGAAAACCAAAGGC
ACTTCATTCAAACTATTTGGGATTCCTCTTGGCAGTCCAGAAAAATCTGAACCTCTGGTA
TCCCCACCAAGTGTCGCATATGACGGGAAACTTCAAACTTCTCCAACAGACAACAATGAG
CCTTGTTCAGAAGCTACCCAGAATATCCAGAACAAAGTGCAAAGTAGTTCAACCAGAAGC
TGCAAGAAGGTCCATAAGCAAGGCAGCGCCCTCGGGAGATCGATCGATCTAACAAAGTTC
GCTTGCTACGATGAGCTGATTGCCGAACTAGACCAGATGTTTGACTTCGATGGTGAGCTG
AAGAGTCCTTGCAGGAACTGGTTGGTCGTCTACACTGACAACGAAGGCGACATGATGCTG
GTCGGCGACGACCCCTGGAATGAGTTCTGTGACATGGTCCACAAGATCTTCATCTACACA
AGGGAGGAAGTGGAGAGGATGAACCCAGGCGCCCTAAACGCGAGGCTCGAAGACTGCCTG
TCTGACTCGCTGGGAAGAGGGCTGGCTTCCAAAGAGCCCCGGAGCGGCCCCTCGACTTCG
GCTGTCGATTCTGAGAACCGCGCTAACTTGTCCACCCTTTTGAAAGTGGTGAAGCAGACA
AAAGGCCACGTGTCAGAGTGA

Peptide Sequence

PEP ID

Zm00001d023659_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:10:13876614:13882418:1 gene:Zm00001d023659 transcript:Zm00001d023659_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 28 description:Auxin response factor 2
Sequence

MVAAAAAAGGGADAGCGGGGGGGGKDALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQ
VEASTNHLAEHQGTPLYNLPWKIPCKLMNMELKAEPDTDEVYAQLTLLPDKKQDENTSAR
VENEEAEEEVVPHVPPATSEGLRIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQ
HPPNQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGE
LRVGVRRALRHQTTIPSSVISSHSMHLGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSR
ARYCESLKRNYSIGMRFRMRFEGEEAAEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDE
ASSVPRPERVSPWQIEPAVSPSPVNPLPVRFKRSRSSVNASPSDVSTVNREVASKVMVES
QQNNLPRALHNQGRTQLTGRYRDSTDVKTAQDLTMWSSGTEQQRNNIAAQTKRCLEGWTQ
SRTPEGYNQLFSAFQPLKDAHNPLRPFPNKISGTRSSTWVTADARYPAQQANHNMLHGTL
SFMPHSSGFRMIQQNNLVTPEAANFTGKSAFTSLQGHVTDQCSTGWFGSIESNSHTDHAS
SSLIRSQPLVIGNDVQKTKGTSFKLFGIPLGSPEKSEPLVSPPSVAYDGKLQTSPTDNNE
PCSEATQNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGEL
KSPCRNWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNARLEDCL
SDSLGRGLASKEPRSGPSTSAVDSENRANLSTLLKVVKQTKGHVSE

Transcript Sequence

Transcript ID

Zm00001d023659_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:13876614:13882418:1 gene:Zm00001d023659 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 28 description:Auxin response factor 2
Sequence

GCTACATAAATCCCCTCGCCTGCCTCCCTTCCCATCTCCTTCCCCGCAAAAATCGCCCGG
GTGCCAGGTGCGCGGCGCAGGGAGGTCGCGACGGATTCCGGGCAAGTGCATGTGAGATCC
GATGGTGGCGGCTGCAGCGGCGGCCGGCGGCGGCGCCGACGCGGGATGCGGAGGCGGAGG
CGGAGGCGGAGGGAAGGACGCGCTGTTCGTGGAGCTGTGGAAGGCCTGCGCGGGGCCGCT
GTCCAGCGTGCCGCTACTCGGGGAGAAGGTCTACTACTTCCCGCAGGGCCACATCGAGCA
GGTGGAGGCATCGACAAACCATCTTGCCGAGCATCAGGGCACGCCCCTCTACAACCTGCC
ATGGAAGATACCCTGCAAGCTCATGAACATGGAGCTGAAGGCTGAGCCGGATACTGATGA
GGTGTACGCCCAACTCACCCTGCTCCCTGATAAGAAGCAAGATGAGAATACATCTGCAAG
AGTGGAGAATGAGGAGGCAGAGGAGGAGGTGGTGCCTCATGTGCCACCAGCCACAAGTGA
GGGGCTTCGCATCCATTCCTTCTGCAAGACATTGACTGCCTCAGACACAAGCACACATGG
TGGTTTCTCAGTGTTGCGCCGGCATGCAGATGAGTGCCTCCCACCACTGGATATGAGTCA
ACATCCCCCAAATCAAGAATTGGTGGCCAAGGACCTGCATGGGGTTGAGTGGCGGTTCCG
TCACATCTTTCGAGGTCAGCCACGGAGACACCTCCTTCAGAGTGGTTGGAGTGTTTTTGT
TAGTGCCAAGCGTCTTGTTGCGGGGGATGCATTCATATTTCTCAGAGGTGAGAATGGGGA
GTTACGTGTTGGAGTTCGGCGTGCACTGAGGCACCAAACCACTATCCCATCTTCAGTCAT
ATCAAGCCACAGTATGCATCTTGGTGTTCTTGCAACAGCATGGCATGCAGTGAACACTGG
GAGTATGTTCACTGTCTACTACAAACCAAGGACTAGTCCAGCTGAATTTGTGGTTTCACG
AGCTAGGTACTGTGAATCACTGAAACGAAATTATTCAATAGGGATGAGGTTTAGGATGAG
ATTTGAAGGTGAAGAAGCGGCAGAGCAAAGATTCACTGGCACAATAGTTGGAATATGTGT
TTCTGATCCATCTGGCTGGGCTGACTCGAAATGGCGTTCCCTTAAGGTGAGATGGGATGA
AGCTTCTTCTGTTCCTCGTCCTGAAAGAGTTTCTCCTTGGCAAATAGAACCTGCTGTTAG
CCCATCTCCTGTGAACCCTCTTCCAGTCAGATTCAAGAGGTCTCGTTCAAGTGTTAACGC
CTCACCATCTGATGTGTCTACTGTAAACAGAGAAGTTGCTTCTAAAGTCATGGTAGAGTC
GCAACAGAATAATCTCCCAAGGGCCTTGCACAATCAAGGAAGGACACAATTGACAGGTCG
ATACCGTGATAGCACTGATGTGAAGACTGCTCAGGATCTTACCATGTGGTCTTCAGGAAC
TGAGCAACAGAGAAACAATATTGCTGCCCAGACAAAACGATGTCTGGAGGGTTGGACGCA
ATCTAGAACTCCAGAAGGTTACAATCAACTGTTCTCGGCATTTCAACCACTGAAGGATGC
ACATAATCCACTTCGTCCTTTTCCTAATAAAATATCTGGGACTCGCTCAAGTACCTGGGT
CACAGCCGATGCCCGTTATCCAGCTCAACAAGCCAATCACAACATGTTACATGGCACATT
GTCTTTTATGCCTCATAGCAGTGGTTTTAGGATGATTCAACAGAATAATCTAGTGACACC
TGAAGCTGCAAATTTTACTGGGAAATCAGCTTTCACTTCACTTCAGGGCCATGTCACTGA
TCAGTGCTCCACAGGCTGGTTTGGATCTATTGAGTCAAATTCCCACACAGACCATGCATC
GTCAAGTTTGATCAGGTCCCAGCCTTTGGTTATTGGAAATGATGTTCAGAAAACCAAAGG
CACTTCATTCAAACTATTTGGGATTCCTCTTGGCAGTCCAGAAAAATCTGAACCTCTGGT
ATCCCCACCAAGTGTCGCATATGACGGGAAACTTCAAACTTCTCCAACAGACAACAATGA
GCCTTGTTCAGAAGCTACCCAGAATATCCAGAACAAAGTGCAAAGTAGTTCAACCAGAAG
CTGCAAGAAGGTCCATAAGCAAGGCAGCGCCCTCGGGAGATCGATCGATCTAACAAAGTT
CGCTTGCTACGATGAGCTGATTGCCGAACTAGACCAGATGTTTGACTTCGATGGTGAGCT
GAAGAGTCCTTGCAGGAACTGGTTGGTCGTCTACACTGACAACGAAGGCGACATGATGCT
GGTCGGCGACGACCCCTGGAATGAGTTCTGTGACATGGTCCACAAGATCTTCATCTACAC
AAGGGAGGAAGTGGAGAGGATGAACCCAGGCGCCCTAAACGCGAGGCTCGAAGACTGCCT
GTCTGACTCGCTGGGAAGAGGGCTGGCTTCCAAAGAGCCCCGGAGCGGCCCCTCGACTTC
GGCTGTCGATTCTGAGAACCGCGCTAACTTGTCCACCCTTTTGAAAGTGGTGAAGCAGAC
AAAAGGCCACGTGTCAGAGTGACCGGAAGAACGAGAAAGGGGTGTGTTTCAGTGGTGTGT
AGTAGGTAGGTAATTTTGTGTGTATGCCTCCGGGTAAAAGCCCCGCGGTACCCAGTTTGT
AGATGGTGCTTCTCCTGGTGCTAGTTTCCCGTCGTAAGCTGGATTTTTTTGGGGGGTGTG
TGCCCTGCTCTGTGTGCTGACCCGCCTGGGGGTAAGTTGTAGCAGAGCAGGAGAAAGCAG
GCAAGAAACCGCTGGTGCGCCTGCTTGGCCAATCCTTTTCCTTGCGGAGCGCTGTAAATA
GCCTTGGATCTGAAGCGTAGTAATGTATTGTCATGGTAC