Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d023658_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:10:13789544:13796079:1 gene:Zm00001d023658 gene_biotype:protein_coding transcript_biotype:protein_coding description:aminopeptidases
Sequence

ATGCAACTGTACTCACTGTTTGATCCTGTTTCTGGTAAGGAGAGGTTACAGCAACAGAAC
CTGACGCCGGAAGAAATCGAGACCCTCGAATTCAATTTCATGACATATCTTTTCCAGGTG
ATGGAAAAGAGCAACTTCAAGTTGCTATCAGATGAAGAGTTTGATATTGCGCAATCTGGA
AAATATTTGTTGAATCTTCCGATCAAAGTTGATGAATCTAAGCTAGACAAGAAGTTGTTG
ACAAAATATTTTAAAGAGCACCCACATGACAATCTACCAGAGTTTTCAAACAAGTATATC
ATCTTTCGTCGGGGCATTGGAATTGATCGAACAACTGACTACTTTTTCATTGAGAAAGTA
GATGTAATGATATCCCGAGCTTGGAGGTCATTGCTCAGGGTTACCAGGATTGACCGGTTA
TTTTCTAAGAAACAACATTTGAAGCCAAAGAATGGTACGAAGAAGACTGATGAAATTAAT
GAAGATGAAGAAGATCCAGAATTGTTTGTTGAGAGAATTCGATTAGAAAAAATTGAACTA
AGTTTGAAAAATCTCATGAGTAAGATGACAATTCAAGAACCTACATTCGATAGGATGATT
GTGGTGTACAGGAGGGCTGGTACAAAGACTGAACCTGATCGGGGAATATTTGTAAAGCAC
TTCAAGAATATCCCAATGGCTGACATGGAAATTGTTCTTCCAGAGAAGAAAAATCCGTCA
CTAACACCAATGGATTGGGTCAAGTTTCTCATTTCTGCTGTTATCGGTTTGGTCACTCTA
GTTGGCTCTCTTGAAATGCCAAAGGCTGATGTATGGGTTGTAATAGCAATCTTGTCTGGT
GTGATTGGATACTGTGCTAAGATATACTTCACATTTCAACAAAATATGACAATGTATCAG
AATTTGATTACAAAATCAATGTATGACAAACAGCTTGATAGTGGGAAAGGAACTCTTCTT
CACTTATGCGATGACGTGATACAGCAAGAAGTTAAAGAGGTCATAATTTGTTACTACATT
TTAATGGAGCAGGGAAAAGCCACTATACAAGTAAGTATAGCTAACTGGTGTTGA

Peptide Sequence

PEP ID

Zm00001d023658_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:10:13789544:13796079:1 gene:Zm00001d023658 transcript:Zm00001d023658_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:aminopeptidases
Sequence

MQLYSLFDPVSGKERLQQQNLTPEEIETLEFNFMTYLFQVMEKSNFKLLSDEEFDIAQSG
KYLLNLPIKVDESKLDKKLLTKYFKEHPHDNLPEFSNKYIIFRRGIGIDRTTDYFFIEKV
DVMISRAWRSLLRVTRIDRLFSKKQHLKPKNGTKKTDEINEDEEDPELFVERIRLEKIEL
SLKNLMSKMTIQEPTFDRMIVVYRRAGTKTEPDRGIFVKHFKNIPMADMEIVLPEKKNPS
LTPMDWVKFLISAVIGLVTLVGSLEMPKADVWVVIAILSGVIGYCAKIYFTFQQNMTMYQ
NLITKSMYDKQLDSGKGTLLHLCDDVIQQEVKEVIICYYILMEQGKATIQVSIANWC

Transcript Sequence

Transcript ID

Zm00001d023658_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:13789544:13796079:1 gene:Zm00001d023658 gene_biotype:protein_coding transcript_biotype:protein_coding description:aminopeptidases
Sequence

ATGCGGTTACACGCCTGAGAGCGAGCGGTGGCCGGCACGCATGGCGGCAGAGAAGCAGGC
GGCGATGGACGGGCGGAAGGACGGGGTGGCGCGGGAGGTCATCCGGATGGAACGGGAGGC
CGTCATCCCCATCCTCAAGCCCAAGCTCGTCATGCGCCTCGCGTATCTCATAGGTAAGCC
ACCACGACGCCGCTTCTCCCGATTTCTCTATTTACTCTATGTAGCAGCAGCAGCAGCGAG
GGGCGCTCGTGGTCTATGACTGACAGGAAGTCTGGGGGACCGGCGCGAGGTGTCGGCCGG
ATTTCGTCTACTCAGTTGTACGTAGTGTTGTGCTCTACTCATTCGGCTCGAAGCATCAGC
GTTCATCGGTCAATTTTGGTCGGTTCTGGGTCCAGAAGTAGAGATTCCTCTATCTGACCT
TCGGCACGACTGCCAGTCATGCTTAATCGTCTGCTGGAATCCCATGGGGGCTTACGCTGC
AAAAGCCAAAAGGGATTAGTGCAGACAGTGTTCTTTGTATCCAGGATTCCCCGTTGATTA
ACTATTCGTGTTCGAAAAACTGCACGCAGAGCATGAAGCTGATCGGAACGAGTTCCTGAA
GCTGTGCAAGAAGGTGGAGTACACCATCCGGGCCTGGTACCTCCTCCAGTTCGAAGACCT
CATGCAACTGTACTCACTGTTTGATCCTGTTTCTGGTAAGGAGAGGTTACAGCAACAGAA
CCTGACGCCGGAAGAAATCGAGACCCTCGAATTCAATTTCATGACATATCTTTTCCAGGT
GATGGAAAAGAGCAACTTCAAGTTGCTATCAGATGAAGAGTTTGATATTGCGCAATCTGG
AAAATATTTGTTGAATCTTCCGATCAAAGTTGATGAATCTAAGCTAGACAAGAAGTTGTT
GACAAAATATTTTAAAGAGCACCCACATGACAATCTACCAGAGTTTTCAAACAAGTATAT
CATCTTTCGTCGGGGCATTGGAATTGATCGAACAACTGACTACTTTTTCATTGAGAAAGT
AGATGTAATGATATCCCGAGCTTGGAGGTCATTGCTCAGGGTTACCAGGATTGACCGGTT
ATTTTCTAAGAAACAACATTTGAAGCCAAAGAATGGTACGAAGAAGACTGATGAAATTAA
TGAAGATGAAGAAGATCCAGAATTGTTTGTTGAGAGAATTCGATTAGAAAAAATTGAACT
AAGTTTGAAAAATCTCATGAGTAAGATGACAATTCAAGAACCTACATTCGATAGGATGAT
TGTGGTGTACAGGAGGGCTGGTACAAAGACTGAACCTGATCGGGGAATATTTGTAAAGCA
CTTCAAGAATATCCCAATGGCTGACATGGAAATTGTTCTTCCAGAGAAGAAAAATCCGTC
ACTAACACCAATGGATTGGGTCAAGTTTCTCATTTCTGCTGTTATCGGTTTGGTCACTCT
AGTTGGCTCTCTTGAAATGCCAAAGGCTGATGTATGGGTTGTAATAGCAATCTTGTCTGG
TGTGATTGGATACTGTGCTAAGATATACTTCACATTTCAACAAAATATGACAATGTATCA
GAATTTGATTACAAAATCAATGTATGACAAACAGCTTGATAGTGGGAAAGGAACTCTTCT
TCACTTATGCGATGACGTGATACAGCAAGAAGTTAAAGAGGTCATAATTTGTTACTACAT
TTTAATGGAGCAGGGAAAAGCCACTATACAAGTAAGTATAGCTAACTGGTGTTGAACTCG
ACATTAATTTTTCCTTTGTATTGCTTTGAGCATTTGTGTCACCTTGTTCCTTAGATTCAC
TCGTTACACATTTCAGCAACTCAGACCTTGTTTGCTATTAGATTGTTGGGAGTTGTGTTA
ACAGCTGTAGCTGAGTAGCATTGTTCAAGTTTGTTTTGTCTTTTTGTTAGAATGCAGCAC
GTCCTATCCAGATGCTAAGCCAATACATACAAGACCAAACCTTTTGTGTGATTCTTGGTT
GTGGCATGTTGCATCAAATACACTGTTTCGACTGAAGGTTAGATTAGCGATTATAGTTAG
ACAAAATTGACCTGTGCAGAACAGTTGTGATAAGAAATTTCTGTGGGTTGTAGTTGTCAG
GAGAGCTTGACAACAAATTTTAAAAATTTGGCTCCACTTGGATGTCATTTGCTCAAACAC
ATTACACATGGTGTAATCGTGGTTACGAGATGTGTTCCAGCAAACACCATGCAAGTGGTA
CAGCAGCCACCTGTGCTACTTTTTTTTTGCTTTATCTCAGGACAAATTACTGCAAATTTA
GCAGTGTTATTAAAACTACGTTTAAACGTCAAAACTCTAATTAGAGGTTGAAATCGCGTT
TTGACATTTTAAACTGTAAAACATAGTGTTTCATGCGTTTTAGACCATTAGCTACTTTTG
GGCCCAGTCTGTTAGTTACTTTTGGGTCCAATCCGGCTCATGGGTGAAGTTTTGGTAAGC
CACTAACCTCTTTGTTTTGGTATTTAATTTCATGTTATTGTCTGAAATTATGATATATTG
GTATTTTTCCTATGTTGTTTAAAACTACGTTTAAACTTTGTTTAAATGTTTATAAGTCAA
AACTCCACCTATGAGCGTTTTATCGTTTTAATAACCTTGAAATTTAGAGAGCTTCATTTT
TTTTGTTCCTACCAGGATCTTGATTTACGGTGTGAAGAGCTAATCAAAGAAGAGTTTGGC
GCAGATTGCAATTTTGATGTTCATGATGCTATAAAGAAGTTAGAGAAGCTTAGCATTGTT
CATCGGGTAAATCTCAAATCAATTCTTTCTAATGCTGAAGTATATATTACTAACTTTTAC
GCACATTAAGTCACAGTCATCAGTGTTTGCGAACTGCATCACCTTCATTTTATAGGTTAA
CACTTATTTTGGTCTTGTTTGCTGCCAAGTATGTGAGCCATGCTTGTGTGCTATATGAAA
CATGCATGGCTGCATCTTTGTTTGAAATTTGAGGTTCATAGGTTCCACTAACATGGGGGA
TACTACATGTGATTCCAGTTAGTTACAACAGGCTGATAATCATTATATGATTTTAACTGT
TTTTACTTAAATCCAACATATTTAAGCTGTTTAGATTTGAAGGAGCAGGCTGAGATAAGA
ACATTTTGCTTACTCTCGTATGGAGCTCGATTGTGATTTTGCCCCTATTTTTTTAACTTC
CTGATTTTACCCCTACATGTATTCGTTGTATTTACTCCAATTTCTAACTCCATTAGCTAG
AGGCTAGAGCAGAAATAAAGGAACCCAAAAGAAAAGAACTTTTTAGAAAATTGGAAAAAC
GACCATTCTGCGTCACTACCTCATGAGAAGCCGTGGCCCTGTGACCCTTCCTCGGTTTCC
CCCTCTTGTTGCATAAGTGACAGTGAACACTGGGTGCTGTGTTAGACTCGGCTGGGCACG
GCACGGACGGCACACGGCGTTGTCGACAGGCTTAGGGGGCTAATTGGAGGTGGGTATTTT
TAATTGTACTGACACCATTAGATCCTTCCAATGGTATAGGGGCAAACTTAATCTTTAATT
TGGAAAGGCAGGGTAAAATCACTAGGTTGAAAAAGTTAGGGCAAAATCACCATTAGGCTG
TCTTTAGCAACATCCTCTATATTTATCCTTTATATACGTCCTTTTCAGTCTCCTTTAAAA
GATTTTATCATCTATATTTCCTTCCTCTCCAACAACGTTCTCTAAATCACGTCCCTTATA
CGCAAATACCTATATTAGAGACATTTTTTATTTTTTATTTTTGTACATACGTATTTATCA
TACTCTCAAATGTATTGTACATATTTTAGTTTTGTTAAACCGGTTATTTAAAGTATTCAA
ATGGATAGAGGACCGTTCAGAGAAATTCTATATATAGATAATCCAGCAGCGTCATCTAAA
TTTAGAGGACCGTTTAAAGGACGCTGTTGGAGAGCGTTTGATCCTCTATATTTAGGATAC
ATGAGGCTTTGCAGAACCTTGCTGGAGCCAACCTAGTCCCTAGAGCTGGGGCATGAACAC
AGAAGCCCCCAAATAGAAGTGACTAGAATCAGCAGGAGCAATATGTGATTTTTACAATCT
CAAACTTATTTTCCACTGCTCTTGCCACAACAGTTTTTTGTGTCCTGGGTAGACAACTTT
GTCAATAGCAGATACGTGCAATAATAACTGAATAACAAATGGATAGGTACAGTCGACAAT
CAAAGTAAGTTGCATGGTGTACTAAACCGCACAGTTCACGATCTGCACAGCACGAGTAAT
AAGGCTTTCCTTTTGTCGCAGGATTCGATTGGAAGGATCTTATGCGTTCCGTTGAAGCGT
GCGAATGAGATCATTGGTACGACGACCGAAGAACTGGTGATGCGAGCACAACAGAACCTT
GCTTCCTGATTCCATTTCCAGTCACGATGGATTGCTGTACCTTCCCTGTCATCTCCCTGC
AAAGCGCGCACCAGAGGGGAAGCTTAGCTTCTGATCATCCCGGAAGTCTATTCCTAGTCT
CATCTCCCTGCAAAGCGCGCACCAGTAATAAGGAGGAAGCTCCTGGTCATCCTGGAAGTC
TATTCACCTGTACATGTGTACGTGTGTATCTTTGCATTGCAGTGCCTTCCCTCTCGTTTG
GTTTAGCACGGAGTGTATATGTCAAACCCTGCTGTTACACAGTTGTACATAACAATTATA
TGTATTTTTTAAATATATAACAGTACAAATT