Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d023640_T044
CDS Infomation	cds chromosome:B73_RefGen_v4:10:13317836:13341579:-1 gene:Zm00001d023640 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 13
Sequence	ATGACTATGATGACGCCGCCCCCTCTCGAGCAGCAGCAGCAGGGGGACGAGATGCTGGTG CCGCACCAGGAGCTCCCTGTCGCTGGCCCAGAACCTGCCCCACAGCCGATGGAAGTTGTT GCGCAGACAGAACCCGCCAACACAGCGGAGACCCAGCCACCCGAGGACCCGCAGACGTCG CGCTTCACCTGGACAATTGAAAGCTTCAGTCGTCTTAACACTAAGAAGCACTACTCTGAT GCGTTCGTCGTTGGAGGATACAAATGGCGTGTGCTAATTTTCCCCAAGGGGAACAATGTG GATCACTTATCGTTGTATTTGGATGTTGCGGATTCTGGGAGCCTCCCATATGGGTGGAGC CGGTATGCTCAGTTCAGCTTGGCTGTTGTGAATCAGGTCCACCCAAAGTATACAATTCGG AAAGATACCCAGCACCAATTTAATGCACGCGAGAGCGACTGGGGTTTCACATCGTTTATG CCTTTGAGTGACCTATATGACCCAAACAGGGGTTATCTTGTGAATGACACTGTTGTTATC GAAGCTGAGGTTGCTGTCCGCAGAATGGTTGATTATTGGACTTATGACTCGAAAAAAGAA ACAGGTTTTGTAGGTCTTAAGAATCAAGGTGCTACCTGTTATATGAACTCTCTCCTTCAA ACGTTATACCACACACCATATTTTAGAAAGGCTGTATATCATATGCCAACAACTGAGAAT GACATGCCATCTGGGAGTATTCCTTTAGCCCTGCAGAGCCTTTTTTACAAGCTCCAGTAT AGCGACAACAGTGTAGCGACGAAAGAGTTGACCAAATCCTTTGGATGGGATACTTATGAT TCTTTCATGCAGCATGACGTGCAAGAACTCAACAGAGTTCTTTGTGAGAAACTGGAAGAT AAGATGAAGGGAACTGTTGTGGAAGGAACAATTGAACAATTATTTGAAGGCCACCACATC AATTACATTGAGTGCATTAACGTGGACTACAAATCTAGCAGAAAAGAATCATTTTACGAT CTACAACTTGACGTGAAAGGTTGTCGTGATGTTTATGCATCATTTGATAAGTATGTGGAA GTGGAGCATCTAGAGGGTGATAACAAATACCATGCGGAGCAATATGGCTTACAGGATGCA AGGAAAGGTGTGCTCTTCCTTGATTTCCCTCCAGTTTTGCAGCTTCAACTGAAGCGTTTT GAATATGATTATATGCGTGATACAATGGTTAAGATTAATGACCGCTATGAATTTCCTCTT CAACTTGACCTTGATAGAGACAATGGAAAATATCTTGCTCCAGATGCAGATCGAAGTATT AGAAACCTCTATACACTTCATAGTGTTCTTGTTCATAGTGGAGGAGTACATGGTGGCCAC TACTATGCTTTCATTCGGCCGACACTCTCGGATCAGTGGTACAAATTTGATGATGAGCGG GTTACAAAAGAAGACACTAAAAAGGCACTTGAAGAGCAGTATGGGGGTGAGGAAGAGTTG CCTCAAATAAACCCTGGTTTCAATAACACGCCATTTAAATTCACAAAGTATTCGAATGCC TACATGCTTGTCTATATACGTGAGAGTGACAAAGAGAAAATAATGTGTAATGTCGATGAG AAGGACATCGCTGAGCATTTGCGGATAAGGTTGAAGAAAGAACAAGAAGAGAAAGAACAC AAGAAGAAGGAGAAGGCTGAAGCTCATCTCTACACTATCATAAAGATCGCTCGAGACGAG GACTTAAAGGAGCAAATCGGTAAGAATATATATTTTGATCTGGTGGACCATGAAAAAGTT CACAGTTTCCGCATTCAGAAGCAGTTGCCTTTTACTTCATTCAAGGAGGAAGTTGCAAAG GAATTTGGCATCCCTGTACAGTTTCAGCGCTTCTGGTTGTGGGCTAAGAGGCAGAACCAT ACATACCGGCCCAATCGTCCATTGACACCCCATGAGGAAGCACAATCAGTCGGGCAGCTT AGGGAAGTCTCAAATAAGGCACACAATGCTGAGCTGAAGCTGTTTCTGGAAGTTGAACTT GGACCGGAGTTATGTCCAATTCGTCCACCTGAGAAGAGCAAAGAAGACATACTTCTTTTC TTCAAGCTTTATAATGCTGAGAAGGAAGAGCTTCATTTTGTTGGTAGGCTTTTTGTGAAG GCTCTGGGAAAGCCATCTGAAATATTGACAAAACTGAATGCAATGGCTGGATTTTCTCCA AATGAAGAAATTGAGCTGTACGAGGAAATTAAGTTTGAGCCAAATGTGATGTGCGAACAT ATTGACAAGAAACTTACTTTCCGCTCTAGTCAGCTTGAAGACGGAGACATTATCTGTTTC CAAAAGGCTCCTGTTCCAGATGGTGATGCACAAGTGCGCTATCCAGATGTTCCTTCATTC TTGGAGTATGTTCACAATAGGCAGGTTGTGCACTTTCGGTGTCTGGACAAACCAAAGGAT GATGATTTTTCTTTGGAATTGTCGAAGCTTCATACATATGATGATGTTGTTGAGAGAGTT GCACATCAACTTGGGTTGGATGATCCATCAAAGATACGGCTTACGTCTCACAATTGTTAT TCTCAGCAACCTAAACCACAGCCTATTAGATATAGGGGGGTAGCACATCTACTGGATATG CTTGTTCATTATAATCAGACTTCTGATATCTTGTATTATGAGGTTCTGGACATTCCACTG CCAGATTTGCAGCGTTTGAAAACGCTTAAAGTTGCATTCCACCATGCAACAAAAGACGAG GTTGTCGTTCATAGCATAAGACTTCCAAGAAATAGCACCATCAGTGATGTGATTACTGAT TTGAAAACCAAGGTTGAACTATCTAATCCTGACGCTGAGCTCCGCTTGCTTGAAGTATTT TACCACAAGATTTATAAGATCTTTCCACCTCATGAGAAGATAGAGAACATAAATGATCAG TACTGGACATTACGAGCTGAGGAGATCCCAGAGGAAGAGAAGAATCTTGGCCCACATGAT CGATTGATTCATGTTTACCATTTCATGAAAGACCCTAACCAGAATCAACAAATTCAAAAT TTTGGAGATCCTTTTTTGATGGTTATTCGGGAAGGTGAGACTGCTGCAGAGGTAATGGAG CGCATCCAGAGAAAACTTAGAGTTCCTGATGATGAGTTCTCCAAGTGGAAGCTTGCATTC ATATCCATGAACCGGCCAGAGTACCTCCAGGACACTGACGTTGTATCAGCACGTTTTCAG CGGAGAGATGTATATGGTGCTTGGGAACAATACCTTGGCTTGGAGCACACTGATACAACA TCGAAACGGTCTTACACATCCAATCAGAATCGGCACACCTATGAGAAGCCCGTAAAAATT TATAATTGA

Peptide Sequence

PEP ID	Zm00001d023640_P044
PEP Infomation	pep chromosome:B73_RefGen_v4:10:13317836:13341579:-1 gene:Zm00001d023640 transcript:Zm00001d023640_T044 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 13
Sequence	MTMMTPPPLEQQQQGDEMLVPHQELPVAGPEPAPQPMEVVAQTEPANTAETQPPEDPQTS RFTWTIESFSRLNTKKHYSDAFVVGGYKWRVLIFPKGNNVDHLSLYLDVADSGSLPYGWS RYAQFSLAVVNQVHPKYTIRKDTQHQFNARESDWGFTSFMPLSDLYDPNRGYLVNDTVVI EAEVAVRRMVDYWTYDSKKETGFVGLKNQGATCYMNSLLQTLYHTPYFRKAVYHMPTTEN DMPSGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED KMKGTVVEGTIEQLFEGHHINYIECINVDYKSSRKESFYDLQLDVKGCRDVYASFDKYVE VEHLEGDNKYHAEQYGLQDARKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPL QLDLDRDNGKYLAPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDER VTKEDTKKALEEQYGGEEELPQINPGFNNTPFKFTKYSNAYMLVYIRESDKEKIMCNVDE KDIAEHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKIARDEDLKEQIGKNIYFDLVDHEKV HSFRIQKQLPFTSFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPHEEAQSVGQL REVSNKAHNAELKLFLEVELGPELCPIRPPEKSKEDILLFFKLYNAEKEELHFVGRLFVK ALGKPSEILTKLNAMAGFSPNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDIICF QKAPVPDGDAQVRYPDVPSFLEYVHNRQVVHFRCLDKPKDDDFSLELSKLHTYDDVVERV AHQLGLDDPSKIRLTSHNCYSQQPKPQPIRYRGVAHLLDMLVHYNQTSDILYYEVLDIPL PDLQRLKTLKVAFHHATKDEVVVHSIRLPRNSTISDVITDLKTKVELSNPDAELRLLEVF YHKIYKIFPPHEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQQIQN FGDPFLMVIREGETAAEVMERIQRKLRVPDDEFSKWKLAFISMNRPEYLQDTDVVSARFQ RRDVYGAWEQYLGLEHTDTTSKRSYTSNQNRHTYEKPVKIYN

Transcript Sequence

Transcript ID	Zm00001d023640_T044
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:13317836:13341579:-1 gene:Zm00001d023640 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 13
Sequence	AAAAACTCCAAATCGTTCCCGACAGCACGCGACCGACCCGTGCTCCGCTTCACCATATCA GCAACTTCCCCTCCCCTCGACCTCGGCCGTTCTTCCTCCTGTTCCCGCCGCCGTCCGCCG CCGCCGCTGCTTGGCGGCCGCCTCTCTCACACCCACCGCAGTGCGGGCGACGAGGACCCC ATGACTATGATGACGCCGCCCCCTCTCGAGCAGCAGCAGCAGGGGGACGAGATGCTGGTG CCGCACCAGGAGCTCCCTGTCGCTGGCCCAGAACCTGCCCCACAGCCGATGGAAGTTGTT GCGCAGACAGAACCCGCCAACACAGCGGAGACCCAGCCACCCGAGGACCCGCAGACGTCG CGCTTCACCTGGACAATTGAAAGCTTCAGTCGTCTTAACACTAAGAAGCACTACTCTGAT GCGTTCGTCGTTGGAGGATACAAATGGCGTGTGCTAATTTTCCCCAAGGGGAACAATGTG GATCACTTATCGTTGTATTTGGATGTTGCGGATTCTGGGAGCCTCCCATATGGGTGGAGC CGGTATGCTCAGTTCAGCTTGGCTGTTGTGAATCAGGTCCACCCAAAGTATACAATTCGG AAAGATACCCAGCACCAATTTAATGCACGCGAGAGCGACTGGGGTTTCACATCGTTTATG CCTTTGAGTGACCTATATGACCCAAACAGGGGTTATCTTGTGAATGACACTGTTGTTATC GAAGCTGAGGTTGCTGTCCGCAGAATGGTTGATTATTGGACTTATGACTCGAAAAAAGAA ACAGGTTTTGTAGGTCTTAAGAATCAAGGTGCTACCTGTTATATGAACTCTCTCCTTCAA ACGTTATACCACACACCATATTTTAGAAAGGCTGTATATCATATGCCAACAACTGAGAAT GACATGCCATCTGGGAGTATTCCTTTAGCCCTGCAGAGCCTTTTTTACAAGCTCCAGTAT AGCGACAACAGTGTAGCGACGAAAGAGTTGACCAAATCCTTTGGATGGGATACTTATGAT TCTTTCATGCAGCATGACGTGCAAGAACTCAACAGAGTTCTTTGTGAGAAACTGGAAGAT AAGATGAAGGGAACTGTTGTGGAAGGAACAATTGAACAATTATTTGAAGGCCACCACATC AATTACATTGAGTGCATTAACGTGGACTACAAATCTAGCAGAAAAGAATCATTTTACGAT CTACAACTTGACGTGAAAGGTTGTCGTGATGTTTATGCATCATTTGATAAGTATGTGGAA GTGGAGCATCTAGAGGGTGATAACAAATACCATGCGGAGCAATATGGCTTACAGGATGCA AGGAAAGGTGTGCTCTTCCTTGATTTCCCTCCAGTTTTGCAGCTTCAACTGAAGCGTTTT GAATATGATTATATGCGTGATACAATGGTTAAGATTAATGACCGCTATGAATTTCCTCTT CAACTTGACCTTGATAGAGACAATGGAAAATATCTTGCTCCAGATGCAGATCGAAGTATT AGAAACCTCTATACACTTCATAGTGTTCTTGTTCATAGTGGAGGAGTACATGGTGGCCAC TACTATGCTTTCATTCGGCCGACACTCTCGGATCAGTGGTACAAATTTGATGATGAGCGG GTTACAAAAGAAGACACTAAAAAGGCACTTGAAGAGCAGTATGGGGGTGAGGAAGAGTTG CCTCAAATAAACCCTGGTTTCAATAACACGCCATTTAAATTCACAAAGTATTCGAATGCC TACATGCTTGTCTATATACGTGAGAGTGACAAAGAGAAAATAATGTGTAATGTCGATGAG AAGGACATCGCTGAGCATTTGCGGATAAGGTTGAAGAAAGAACAAGAAGAGAAAGAACAC AAGAAGAAGGAGAAGGCTGAAGCTCATCTCTACACTATCATAAAGATCGCTCGAGACGAG GACTTAAAGGAGCAAATCGGTAAGAATATATATTTTGATCTGGTGGACCATGAAAAAGTT CACAGTTTCCGCATTCAGAAGCAGTTGCCTTTTACTTCATTCAAGGAGGAAGTTGCAAAG GAATTTGGCATCCCTGTACAGTTTCAGCGCTTCTGGTTGTGGGCTAAGAGGCAGAACCAT ACATACCGGCCCAATCGTCCATTGACACCCCATGAGGAAGCACAATCAGTCGGGCAGCTT AGGGAAGTCTCAAATAAGGCACACAATGCTGAGCTGAAGCTGTTTCTGGAAGTTGAACTT GGACCGGAGTTATGTCCAATTCGTCCACCTGAGAAGAGCAAAGAAGACATACTTCTTTTC TTCAAGCTTTATAATGCTGAGAAGGAAGAGCTTCATTTTGTTGGTAGGCTTTTTGTGAAG GCTCTGGGAAAGCCATCTGAAATATTGACAAAACTGAATGCAATGGCTGGATTTTCTCCA AATGAAGAAATTGAGCTGTACGAGGAAATTAAGTTTGAGCCAAATGTGATGTGCGAACAT ATTGACAAGAAACTTACTTTCCGCTCTAGTCAGCTTGAAGACGGAGACATTATCTGTTTC CAAAAGGCTCCTGTTCCAGATGGTGATGCACAAGTGCGCTATCCAGATGTTCCTTCATTC TTGGAGTATGTTCACAATAGGCAGGTTGTGCACTTTCGGTGTCTGGACAAACCAAAGGAT GATGATTTTTCTTTGGAATTGTCGAAGCTTCATACATATGATGATGTTGTTGAGAGAGTT GCACATCAACTTGGGTTGGATGATCCATCAAAGATACGGCTTACGTCTCACAATTGTTAT TCTCAGCAACCTAAACCACAGCCTATTAGATATAGGGGGGTAGCACATCTACTGGATATG CTTGTTCATTATAATCAGACTTCTGATATCTTGTATTATGAGGTTCTGGACATTCCACTG CCAGATTTGCAGCGTTTGAAAACGCTTAAAGTTGCATTCCACCATGCAACAAAAGACGAG GTTGTCGTTCATAGCATAAGACTTCCAAGAAATAGCACCATCAGTGATGTGATTACTGAT TTGAAAACCAAGGTTGAACTATCTAATCCTGACGCTGAGCTCCGCTTGCTTGAAGTATTT TACCACAAGATTTATAAGATCTTTCCACCTCATGAGAAGATAGAGAACATAAATGATCAG TACTGGACATTACGAGCTGAGGAGATCCCAGAGGAAGAGAAGAATCTTGGCCCACATGAT CGATTGATTCATGTTTACCATTTCATGAAAGACCCTAACCAGAATCAACAAATTCAAAAT TTTGGAGATCCTTTTTTGATGGTTATTCGGGAAGGTGAGACTGCTGCAGAGGTAATGGAG CGCATCCAGAGAAAACTTAGAGTTCCTGATGATGAGTTCTCCAAGTGGAAGCTTGCATTC ATATCCATGAACCGGCCAGAGTACCTCCAGGACACTGACGTTGTATCAGCACGTTTTCAG CGGAGAGATGTATATGGTGCTTGGGAACAATACCTTGGCTTGGAGCACACTGATACAACA TCGAAACGGTCTTACACATCCAATCAGAATCGGCACACCTATGAGAAGCCCGTAAAAATT TATAATTGAGAAACCTTCATCAAAGTTCAATCCATTGTCAAAGGCGTCGACAGCAGCATG CCCAAGGTGATACGACGCTTCAAACAGAAAAATCTGGTATAGTATTTGCCTGTGCTAAGG CCTGCAAGGCGCAAGCCCACCAGGCCACCAATGCTGCTTCCAACCTTCATTGTTCCAAGC AACCAAGCATGTGTTTGGTTTTTCTTCGTCGTGTCGAGTATGACGGCCCCTGACAGGGTA GGTGTTTGCTTAGTTTGTAGAGCAAAGCTAGCACATAAGAAAAAATATTTTGGT