Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d023636_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:13145933:13165086:-1 gene:Zm00001d023636 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 354 description:Zinc finger CCCH domain-containing protein 67
Sequence

ATGGCGGACGCCGACGCCAAGTCCCAGCCGCCCGACGCCGCGGCATCCCCGGATGCCTCG
ATCTCCTCCCCCTCCTCCCTAGGCGGCGGCGGCGGCGACGCGGCCGACGCGGACGCGATC
GAGAAGCAGCTCGCCGGCCTGGGCATCGCCGTCGCCGGTGGGTTCCCCGAGCCATCGGGA
TGGGACGATGGCCCCGTACCAGTCCCCATCCCGGCCGATGTCCTTGTCGGCGGTGATGAG
GGTGCCGGCGAGAAGCCGCGGGCGCCGGCGCCGGCGCCGACTGGGGCGGTGGATGTGAAG
GTGCGGTTCCCGCGCCGGCCCGGGGAGCCGGACTGCAGCTACTACCTCAAGTTCGGCACC
TGCCGCTTCGGGATGAAGTGCAAGTTCAACCACCCTGCGAGGAAGAAGAAGACTAGTAGG
GTGAGAGGCGTCGGGAGCAACGGCAGCGGGAGCAACAGCAGCAGCAATAAAGCATCTTCT
CCTGATGATGATCAGGCTCCTAAAGAAGAATACGAAGGTCTTGTTCCGGACATTTCGGAT
TCCATGGGCTTTGATGACAAGGGGAGCTTATCTAGTTCAGAAAATCATAGGAATATGTCA
TATGAAGTCAGTATTTTCTTTTATGTTATAATGATTAGGTTCTTGATCTCTGTTATTGAT
ATGAAAAGGGGGAAACTAGAGCCAAAGGAAAAGGTTTGTGAAGAACCTGAAAAGGCAATT
CATTTTACGAAGTTAGACGAGACAAATATCGCAACCCAAAAGTATTATTCAACACCTGGA
GGATGCAAATTCGGTAAAACTTGCAAATACCTCCACCGTGAGGGAAATGGAGGGAAAACA
GAGGTTGAAAAAGCTGAGCTAAACTTTCTAGGTCTTCCACTGCGACCAGGTGAAAAGGAG
TGCCCATACTATATGCGCACTGGGAGCTGCAAATTTGCGACTAACTGCAAGTTTCACCAC
CCAGATCCTACTAATGCATCTTCAAAAGAACCAGGGTTGGAACATGAGAATGGCGATGTA
CCACTGCAAAATGTCCAAGGATCCTCTCAGCCTAGCCTTCAGATGTGGCCTGACCAGAGA
GCATTGAATGAACAGCATGTTCCTTTTCTTGCTCCAGCACCGTCATACAGTGGAGGGATG
GTACCTTTGAATCCATATTACCCTCCCGGTGTTCCTTTCCCGCATTTTCCAGCTGCCCAT
ATGAATCACCCGATGTACAAGGCTGCAGATATACCAGGACATCAACCACCACCATCTGAT
GAGTATCCCGAGAGACCTGGCCAACCTGAATGCCAGCATTTCGTTAAGAGCGGTTTCTGT
AAATACAGGATGAAATGCAGATATCACCATCCAAGGTCGCGCCAGTCTGCACCACCACCA
GCAGGTCTTAGCCCCATCGGCTTGCCTATCAAACCTGATCAACCTGTGTGCACTTACTAT
GGACGCTATGGCTTCTGCAAGTATGGGCCAGCCTGCATGTTCAACCACCCCTTCAACTTC
GGGCCTCCCGTGCCGGCAGCAGGACCACCCCTCCCTGGGCAGTACCCTACGCATGGAAAC
TTCGCCTAG

Peptide Sequence

PEP ID

Zm00001d023636_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:13145933:13165086:-1 gene:Zm00001d023636 transcript:Zm00001d023636_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 354 description:Zinc finger CCCH domain-containing protein 67
Sequence

MADADAKSQPPDAAASPDASISSPSSLGGGGGDAADADAIEKQLAGLGIAVAGGFPEPSG
WDDGPVPVPIPADVLVGGDEGAGEKPRAPAPAPTGAVDVKVRFPRRPGEPDCSYYLKFGT
CRFGMKCKFNHPARKKKTSRVRGVGSNGSGSNSSSNKASSPDDDQAPKEEYEGLVPDISD
SMGFDDKGSLSSSENHRNMSYEVSIFFYVIMIRFLISVIDMKRGKLEPKEKVCEEPEKAI
HFTKLDETNIATQKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGLPLRPGEKE
CPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPSLQMWPDQR
ALNEQHVPFLAPAPSYSGGMVPLNPYYPPGVPFPHFPAAHMNHPMYKAADIPGHQPPPSD
EYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGLSPIGLPIKPDQPVCTYY
GRYGFCKYGPACMFNHPFNFGPPVPAAGPPLPGQYPTHGNFA

Transcript Sequence

Transcript ID

Zm00001d023636_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:13145933:13165086:-1 gene:Zm00001d023636 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 354 description:Zinc finger CCCH domain-containing protein 67
Sequence

TGTCTTTTTTTTACCGTTTTACCTGTCCCCCGACGCGCTGTCCCCGTCCGAGACTCCTCT
TTCTGTAGGTTTTCTCCCCACTTCGCTTTGCTTCCCCACCTGCTCTCTCTCACTCGTCCC
CATCACCGTCGCCATCACTACCCCTCTCCTCTCTCTCATCGGCTCCAATGGCGGACGCCG
ACGCCAAGTCCCAGCCGCCCGACGCCGCGGCATCCCCGGATGCCTCGATCTCCTCCCCCT
CCTCCCTAGGCGGCGGCGGCGGCGACGCGGCCGACGCGGACGCGATCGAGAAGCAGCTCG
CCGGCCTGGGCATCGCCGTCGCCGGTGGGTTCCCCGAGCCATCGGGATGGGACGATGGCC
CCGTACCAGTCCCCATCCCGGCCGATGTCCTTGTCGGCGGTGATGAGGGTGCCGGCGAGA
AGCCGCGGGCGCCGGCGCCGGCGCCGACTGGGGCGGTGGATGTGAAGGTGCGGTTCCCGC
GCCGGCCCGGGGAGCCGGACTGCAGCTACTACCTCAAGTTCGGCACCTGCCGCTTCGGGA
TGAAGTGCAAGTTCAACCACCCTGCGAGGAAGAAGAAGACTAGTAGGGTGAGAGGCGTCG
GGAGCAACGGCAGCGGGAGCAACAGCAGCAGCAATAAAGCATCTTCTCCTGATGATGATC
AGGCTCCTAAAGAAGAATACGAAGGTCTTGTTCCGGACATTTCGGATTCCATGGGCTTTG
ATGACAAGGGGAGCTTATCTAGTTCAGAAAATCATAGGAATATGTCATATGAAGTCAGTA
TTTTCTTTTATGTTATAATGATTAGGTTCTTGATCTCTGTTATTGATATGAAAAGGGGGA
AACTAGAGCCAAAGGAAAAGGTTTGTGAAGAACCTGAAAAGGCAATTCATTTTACGAAGT
TAGACGAGACAAATATCGCAACCCAAAAGTATTATTCAACACCTGGAGGATGCAAATTCG
GTAAAACTTGCAAATACCTCCACCGTGAGGGAAATGGAGGGAAAACAGAGGTTGAAAAAG
CTGAGCTAAACTTTCTAGGTCTTCCACTGCGACCAGGTGAAAAGGAGTGCCCATACTATA
TGCGCACTGGGAGCTGCAAATTTGCGACTAACTGCAAGTTTCACCACCCAGATCCTACTA
ATGCATCTTCAAAAGAACCAGGGTTGGAACATGAGAATGGCGATGTACCACTGCAAAATG
TCCAAGGATCCTCTCAGCCTAGCCTTCAGATGTGGCCTGACCAGAGAGCATTGAATGAAC
AGCATGTTCCTTTTCTTGCTCCAGCACCGTCATACAGTGGAGGGATGGTACCTTTGAATC
CATATTACCCTCCCGGTGTTCCTTTCCCGCATTTTCCAGCTGCCCATATGAATCACCCGA
TGTACAAGGCTGCAGATATACCAGGACATCAACCACCACCATCTGATGAGTATCCCGAGA
GACCTGGCCAACCTGAATGCCAGCATTTCGTTAAGAGCGGTTTCTGTAAATACAGGATGA
AATGCAGATATCACCATCCAAGGTCGCGCCAGTCTGCACCACCACCAGCAGGTCTTAGCC
CCATCGGCTTGCCTATCAAACCTGATCAACCTGTGTGCACTTACTATGGACGCTATGGCT
TCTGCAAGTATGGGCCAGCCTGCATGTTCAACCACCCCTTCAACTTCGGGCCTCCCGTGC
CGGCAGCAGGACCACCCCTCCCTGGGCAGTACCCTACGCATGGAAACTTCGCCTAGCAGG
CACGTGACGAGCGATTTTCTGAGTCGCCACGATTGCTTGTAATAACCTCCTCCACCTGTA
AAGTAGCGTAGACAAAAGCTGTACGTGGTTGGCAGTAGACATCCAGCATGTAGGCGCAAC
GAAGTTGCATGGAGATGGGTACGTTACAGTTGGTATTGCAAACTTTACGCTGTACAAGTT
ACAGTCCATACATAAGCTGCCATCGCATTTAAAATCCTGGTTGCTGAGTACTCCCTCGGT
CTGTCTACATGATTTAGTCGTTTTAGATTTATCAACTTTGACAGATTATATTGTATGTGT
TTTATAGTATTTTACAACATAAACATAAAGACTTGACTTAGGGCAAACCTAGAACGAATT
AAATCATGTGGATGGAGGGAGTATGTGCTTTAGGCCCGG