Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d023583_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:10:10822474:10840230:-1 gene:Zm00001d023583 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dynamin-like protein ARC5
Sequence

ATGGCGACGCCGTTCCCGCTGGAGGCCGACGAGGGGGAGGCGCGGGAGCTCCTCTACGAG
GCGTACAACGAGCTGCACGCGCTGGCGTCCGAGCTGGGCGGCGCGGCGGCGGCGCCGGCG
GTCGTGGTCGTCGGCCACCAGACGGACGGCAAGAGCGCGCTGGTCGAGGCGCTCATGGGG
TTCCAGTTCAACCACGTCGGCGGTGGCACCAAGACGCGGCGCCCCGTCGCGCTCCACCTC
CGCTTCAACCCGCGCTGCGACGAGCCCCAGTGCCGCCTCCTCTCTGCAACCGGCGATGCC
GAAGAGCATGACGAAGCCGGGGTTGCCGCCCGCCCCATGCCGCTCGCCGACATCCAGGCA
TATATTGAAGCTGAAAACTTGAGGTTGGAGAATGACCCTTGCCAATTTTCAGAGAAGGAA
ATCATAATTAAGGTAGAATACAAGCATTCCCCCAATCTCACCATTATTGACACTCCAGGC
CTCATCCTTCCAGCTCCTGGCCGTAAAAACAGAGTTTTGCAGAGCCAGGCTTCTGCTGTT
GAGAGCCTTGTTCGTGCTAAAATCCAGCATAAAGAGACCATTATACTGTGCCTTGAAGAT
TGTAGTGATTGGAGTAATGCAACTACACGGAGAGTAGTGATGCAGGTCGATCCTGATCTT
GCAAGGACTGTTCTAGTCTCCACAAAACTGGACACAAAAATACCACAATTTGCCCGTCCC
TCTGATGTTGAAGTGTTTCTTCACCCACCAAATTGTGTGCTAGATGTTTCCTTATTGGGA
GATTCTCCCTTTTTCACATCAGTACCTTCTGGTAGAGTTGGCTCTTGCCATGAAGCTGTG
TTCAGGTCAAATGGAGAGTTTAAGAAGGCCATCTTATCAAGAGAGTTGGAAGATATTGCA
TCTATTGAAGACAAGTTAGGAAGGTCACTTACAACCATGGAGAAAGATAGAATTGGAGTG
GGTAACTTAAGATTATATTTGGAAGAGTTGCTGCAGAAGAGGTACATTAAGAGTGTTCCA
TTAATCATTCCACTTCTTGAGAAGCAACATCGAAATACAACAAGTAAATTGCGTGAAATC
AGTCATGAACTCAGTGATCTGGATGAAACCAAACTGAAGGAGAAAGCTCAGCTATTCCAT
GACACATTTTTGACCAAGTTATCTTTGCTATTGAAAGGCATGGTGGTGGCACCTCCTGAT
AAATTTGGAGAAACTTTAGTCAACGAGAGGATTAATGGAGGAACATTTACTGGAAGTGAG
AATTTCCAGCTCCCGAACAAGATGATGCCAAATGGTGGCATGCGTCTTTATGGTGGTGCA
CAATACCATCGGGCAATGGCTGAATTTCGTCTGGTAGTTGGTAGTACCAGGTGCCCTCCA
ATAACTAGGGATGAAATTGTCAATGCTTGTGGTGTTGAGGATATTCATGATGGTACAAAC
TACTCCAGGACTGCTTGTGTAATTGCCGTGGCAAAAGCACGTGACACGTTTGAGCCATTC
CTTGATCAGTTGGGTTTTAGGCTTTTGTACATACTGAAGAGGCTGATCCCAATCTCTGTT
TATCTGTTGGAGAAAGATGGTGAGCACTTTAGTAGCCATGAAGTGCTCATAAGGCGTGTC
CAGGAAGCATTCAAGAGGTTTGTTGAATCCACTGAGCAATCATGTCGTCAAAGGTGTATG
GAAGATTTGGAGAGTACCACTCGTTATGTCACTTGGTCCCTTCACAACAAGAACCGTGCT
GGATTGAGACATTTCCTCGATTCATTTGTTGCACCGGAGCAACTATCAGTAAATACATTG
AACGAGCGGTTTTCTGGGTTGAATGATAACAAACAGGATAAGGCAAAGGGTGACTCGAAG
TCAAACCATTCTCCAGACACAAATTCGTCCACTGCTATGCCAGAGACAAGGCTGGTTGAC
CTATTGGATAGCACACTCTGGAACAGACGCCTGGTTCCCTCATCTGAAAGGCTTGTTTAT
GCGCTGGTTCACCAGATTTTTCATGGAATCAAAGAGCATTTTCTTGTCACCACTGAACTG
AAGTTCAATTGCTTTCTCCTCATGCCGATTGTTGACAAACTACCAGCACTTCTAAGACAA
GACCTTGAGTCAGCTTTCGAAGAGGAACTTGATAGCATCTTTGATGTCACTCAGCTGCGC
CAGTCACTTGGGCAGAAGAAGCGCGAGCTGGAGATCGAACTGAAGCGGATCAAGCGCTTA
AAGGAAAAGTTTGGAGAGATAAATAAGAAGCTCAATTCTCTTCAGGTTAGGCAGTAG

Peptide Sequence

PEP ID

Zm00001d023583_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:10:10822474:10840230:-1 gene:Zm00001d023583 transcript:Zm00001d023583_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dynamin-like protein ARC5
Sequence

MATPFPLEADEGEARELLYEAYNELHALASELGGAAAAPAVVVVGHQTDGKSALVEALMG
FQFNHVGGGTKTRRPVALHLRFNPRCDEPQCRLLSATGDAEEHDEAGVAARPMPLADIQA
YIEAENLRLENDPCQFSEKEIIIKVEYKHSPNLTIIDTPGLILPAPGRKNRVLQSQASAV
ESLVRAKIQHKETIILCLEDCSDWSNATTRRVVMQVDPDLARTVLVSTKLDTKIPQFARP
SDVEVFLHPPNCVLDVSLLGDSPFFTSVPSGRVGSCHEAVFRSNGEFKKAILSRELEDIA
SIEDKLGRSLTTMEKDRIGVGNLRLYLEELLQKRYIKSVPLIIPLLEKQHRNTTSKLREI
SHELSDLDETKLKEKAQLFHDTFLTKLSLLLKGMVVAPPDKFGETLVNERINGGTFTGSE
NFQLPNKMMPNGGMRLYGGAQYHRAMAEFRLVVGSTRCPPITRDEIVNACGVEDIHDGTN
YSRTACVIAVAKARDTFEPFLDQLGFRLLYILKRLIPISVYLLEKDGEHFSSHEVLIRRV
QEAFKRFVESTEQSCRQRCMEDLESTTRYVTWSLHNKNRAGLRHFLDSFVAPEQLSVNTL
NERFSGLNDNKQDKAKGDSKSNHSPDTNSSTAMPETRLVDLLDSTLWNRRLVPSSERLVY
ALVHQIFHGIKEHFLVTTELKFNCFLLMPIVDKLPALLRQDLESAFEEELDSIFDVTQLR
QSLGQKKRELEIELKRIKRLKEKFGEINKKLNSLQVRQ

Transcript Sequence

Transcript ID

Zm00001d023583_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:10822474:10840230:-1 gene:Zm00001d023583 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dynamin-like protein ARC5
Sequence

GAGAATCTCGTTCGCCAGCAGAAGCAGTCAAGCTGAAAGAGAGGGAGGAAAAAAAAGAGA
TAACGCACGGCCGCCCGCAGTGCTTGAAACCAGCCCGCTCCTCCATTCCAACGTCTCCAC
CCACTGCTCCCAATGGCGACGCCGTTCCCGCTGGAGGCCGACGAGGGGGAGGCGCGGGAG
CTCCTCTACGAGGCGTACAACGAGCTGCACGCGCTGGCGTCCGAGCTGGGCGGCGCGGCG
GCGGCGCCGGCGGTCGTGGTCGTCGGCCACCAGACGGACGGCAAGAGCGCGCTGGTCGAG
GCGCTCATGGGGTTCCAGTTCAACCACGTCGGCGGTGGCACCAAGACGCGGCGCCCCGTC
GCGCTCCACCTCCGCTTCAACCCGCGCTGCGACGAGCCCCAGTGCCGCCTCCTCTCTGCA
ACCGGCGATGCCGAAGAGCATGACGAAGCCGGGGTTGCCGCCCGCCCCATGCCGCTCGCC
GACATCCAGGCATATATTGAAGCTGAAAACTTGAGGTTGGAGAATGACCCTTGCCAATTT
TCAGAGAAGGAAATCATAATTAAGGTAGAATACAAGCATTCCCCCAATCTCACCATTATT
GACACTCCAGGCCTCATCCTTCCAGCTCCTGGCCGTAAAAACAGAGTTTTGCAGAGCCAG
GCTTCTGCTGTTGAGAGCCTTGTTCGTGCTAAAATCCAGCATAAAGAGACCATTATACTG
TGCCTTGAAGATTGTAGTGATTGGAGTAATGCAACTACACGGAGAGTAGTGATGCAGGTC
GATCCTGATCTTGCAAGGACTGTTCTAGTCTCCACAAAACTGGACACAAAAATACCACAA
TTTGCCCGTCCCTCTGATGTTGAAGTGTTTCTTCACCCACCAAATTGTGTGCTAGATGTT
TCCTTATTGGGAGATTCTCCCTTTTTCACATCAGTACCTTCTGGTAGAGTTGGCTCTTGC
CATGAAGCTGTGTTCAGGTCAAATGGAGAGTTTAAGAAGGCCATCTTATCAAGAGAGTTG
GAAGATATTGCATCTATTGAAGACAAGTTAGGAAGGTCACTTACAACCATGGAGAAAGAT
AGAATTGGAGTGGGTAACTTAAGATTATATTTGGAAGAGTTGCTGCAGAAGAGGTACATT
AAGAGTGTTCCATTAATCATTCCACTTCTTGAGAAGCAACATCGAAATACAACAAGTAAA
TTGCGTGAAATCAGTCATGAACTCAGTGATCTGGATGAAACCAAACTGAAGGAGAAAGCT
CAGCTATTCCATGACACATTTTTGACCAAGTTATCTTTGCTATTGAAAGGCATGGTGGTG
GCACCTCCTGATAAATTTGGAGAAACTTTAGTCAACGAGAGGATTAATGGAGGAACATTT
ACTGGAAGTGAGAATTTCCAGCTCCCGAACAAGATGATGCCAAATGGTGGCATGCGTCTT
TATGGTGGTGCACAATACCATCGGGCAATGGCTGAATTTCGTCTGGTAGTTGGTAGTACC
AGGTGCCCTCCAATAACTAGGGATGAAATTGTCAATGCTTGTGGTGTTGAGGATATTCAT
GATGGTACAAACTACTCCAGGACTGCTTGTGTAATTGCCGTGGCAAAAGCACGTGACACG
TTTGAGCCATTCCTTGATCAGTTGGGTTTTAGGCTTTTGTACATACTGAAGAGGCTGATC
CCAATCTCTGTTTATCTGTTGGAGAAAGATGGTGAGCACTTTAGTAGCCATGAAGTGCTC
ATAAGGCGTGTCCAGGAAGCATTCAAGAGGTTTGTTGAATCCACTGAGCAATCATGTCGT
CAAAGGTGTATGGAAGATTTGGAGAGTACCACTCGTTATGTCACTTGGTCCCTTCACAAC
AAGAACCGTGCTGGATTGAGACATTTCCTCGATTCATTTGTTGCACCGGAGCAACTATCA
GTAAATACATTGAACGAGCGGTTTTCTGGGTTGAATGATAACAAACAGGATAAGGCAAAG
GGTGACTCGAAGTCAAACCATTCTCCAGACACAAATTCGTCCACTGCTATGCCAGAGACA
AGGCTGGTTGACCTATTGGATAGCACACTCTGGAACAGACGCCTGGTTCCCTCATCTGAA
AGGCTTGTTTATGCGCTGGTTCACCAGATTTTTCATGGAATCAAAGAGCATTTTCTTGTC
ACCACTGAACTGAAGTTCAATTGCTTTCTCCTCATGCCGATTGTTGACAAACTACCAGCA
CTTCTAAGACAAGACCTTGAGTCAGCTTTCGAAGAGGAACTTGATAGCATCTTTGATGTC
ACTCAGCTGCGCCAGTCACTTGGGCAGAAGAAGCGCGAGCTGGAGATCGAACTGAAGCGG
ATCAAGCGCTTAAAGGAAAAGTTTGGAGAGATAAATAAGAAGCTCAATTCTCTTCAGGTT
AGGCAGTAGGCCAGGCTCAAAATTTAGCAGTAGCTTGGTAGTCTAGGACTCCAGGTAGAG
TGTTTCAATGCTGTAATAAAATAATTGGTCATCTAGAGTGACTTCTTGTTGTATCCTATC
AGTTGTAAATATGAAGTATTCCTATGTCTTAACGTATGTTGTTGC