Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d023558_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:10165237:10166640:-1 gene:Zm00001d023558 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2H2-transcription factor 235 description:Protein SENSITIVE TO PROTON RHIZOTOXICITY 1
Sequence	ATGGATAACCACATCCATAGTCAGCCAGCTGCTAACCTCTACTACCAGTTCGGCATGGGG ACTGAGCAGCAATACCCACCACCGTTCGCCTCACCACCATCCACCAACATCCCGCACATG GACTGGAACCCGGCCACGATGCTAGACAACCTCACCTTCATCGAGGAGAAGATACAGCAA GTGAAGGACGTCATCCGCACAATGGTGGACAACGCCGGGCAGGTGCAGGTCCAGTGCCAC CACCAAGCAGGCGAGCTGCTGGCTCAGAAGCAGAAGCAGCAGGTGGTCAACGCGGACCTG ACATGCCTTATAGTTCAGCTCATCTCCACCGCCGGCAGCCTGCTCCCGTCACTGAAGAAC TCGTCGTTCCTCAGCCACCCCCACCCTGCTGGCCACGTGGACATGGCTAACCATGTTGGC CCAAGCTCGAGCCTAGTGCCTAATGCGATGACCGTTTCTGAAGACTATGAGGAGCTGTTC AAGGGATGGACCGATGGCGGCATTGAGGTCGACGACGACGGCGTTCTTGTCGAGGAGCAG GAAATTACCAAGGACGGAGACAGCCTCTCGTACGAGCTGCTGCAGCTGGAGGAGGACGAG ATACTGGCGCCGCACACGCACTTTTGCACCATCTGCGGGAAAGGGTTCAAGCGGGACGCG AACCTGCGGATGCACATGCGAGGGCACGGCGACGAGTACAAGAGCCCGGCGGCGCTGGCC AAGCCGCCGAGGGACCCGGGCGCGGAGCAGGAGCCGGCGAAGCGGCGGTACTCGTGCCCG TTCGCGGGGTGCAAGCGGAACAAGCTGCACAAAAGCTTCCAGCCCCTCAAGACCATCCTG TGCGTGAAGAACCACTACAGGCGGAGCCACTGCGAGAAGAGCCACACCTGCGGCCGGTGC CACGCCAAGAAGTTCTCCATCGTGGCCGACCTGAGGACGCACGAGAAGCACTGCGGCCGC CGGGACAGGTGGGTGTGCTCCTGCGGGACGAGTTTCTCGAGGAAGGACAAGCTCTTCGCG CACGTCGCCTTGTTCCAAGGTCACACGCCCGCGTTGTCGTCGCCGCTGGAGGAGGAGCCG CCGAAGGCTTGCTCGGACCAGCACCAGACCGGCCGTGCTGGGAGCCGTCGGGAACCAGCG AAAGTCCCAGCTGGCTCAGTGGGCGGCGGCAGCGGCAGCAGCTTCGTGTGGGGTGCCTCG TCCTCAGGGGAGAACAGTGCTCTGGATATCAAAGGTTTTGTTGATGGATGCAGTGGTGAC TTCCTCTCGACGGCGAACTTTGGCTCCTTCAACCTCAGCTTCGGGCCTGCTGACGGGTTC ACAGGAGAGCCTTCTAGTGGTGGTTCGTTCTCGATGCTACCTCCTGAGCACTTTCAGAGT GCTCAGAAGAAGGGGCAGAACTGA

Peptide Sequence

PEP ID	Zm00001d023558_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:10165237:10166640:-1 gene:Zm00001d023558 transcript:Zm00001d023558_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2H2-transcription factor 235 description:Protein SENSITIVE TO PROTON RHIZOTOXICITY 1
Sequence	MDNHIHSQPAANLYYQFGMGTEQQYPPPFASPPSTNIPHMDWNPATMLDNLTFIEEKIQQ VKDVIRTMVDNAGQVQVQCHHQAGELLAQKQKQQVVNADLTCLIVQLISTAGSLLPSLKN SSFLSHPHPAGHVDMANHVGPSSSLVPNAMTVSEDYEELFKGWTDGGIEVDDDGVLVEEQ EITKDGDSLSYELLQLEEDEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKSPAALA KPPRDPGAEQEPAKRRYSCPFAGCKRNKLHKSFQPLKTILCVKNHYRRSHCEKSHTCGRC HAKKFSIVADLRTHEKHCGRRDRWVCSCGTSFSRKDKLFAHVALFQGHTPALSSPLEEEP PKACSDQHQTGRAGSRREPAKVPAGSVGGGSGSSFVWGASSSGENSALDIKGFVDGCSGD FLSTANFGSFNLSFGPADGFTGEPSSGGSFSMLPPEHFQSAQKKGQN

Transcript Sequence

Transcript ID	Zm00001d023558_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:10165237:10166640:-1 gene:Zm00001d023558 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2H2-transcription factor 235 description:Protein SENSITIVE TO PROTON RHIZOTOXICITY 1
Sequence	ATGGATAACCACATCCATAGTCAGCCAGCTGCTAACCTCTACTACCAGTTCGGCATGGGG ACTGAGCAGCAATACCCACCACCGTTCGCCTCACCACCATCCACCAACATCCCGCACATG GACTGGAACCCGGCCACGATGCTAGACAACCTCACCTTCATCGAGGAGAAGATACAGCAA GTGAAGGACGTCATCCGCACAATGGTGGACAACGCCGGGCAGGTGCAGGTCCAGTGCCAC CACCAAGCAGGCGAGCTGCTGGCTCAGAAGCAGAAGCAGCAGGTGGTCAACGCGGACCTG ACATGCCTTATAGTTCAGCTCATCTCCACCGCCGGCAGCCTGCTCCCGTCACTGAAGAAC TCGTCGTTCCTCAGCCACCCCCACCCTGCTGGCCACGTGGACATGGCTAACCATGTTGGC CCAAGCTCGAGCCTAGTGCCTAATGCGATGACCGTTTCTGAAGACTATGAGGAGCTGTTC AAGGGATGGACCGATGGCGGCATTGAGGTCGACGACGACGGCGTTCTTGTCGAGGAGCAG GAAATTACCAAGGACGGAGACAGCCTCTCGTACGAGCTGCTGCAGCTGGAGGAGGACGAG ATACTGGCGCCGCACACGCACTTTTGCACCATCTGCGGGAAAGGGTTCAAGCGGGACGCG AACCTGCGGATGCACATGCGAGGGCACGGCGACGAGTACAAGAGCCCGGCGGCGCTGGCC AAGCCGCCGAGGGACCCGGGCGCGGAGCAGGAGCCGGCGAAGCGGCGGTACTCGTGCCCG TTCGCGGGGTGCAAGCGGAACAAGCTGCACAAAAGCTTCCAGCCCCTCAAGACCATCCTG TGCGTGAAGAACCACTACAGGCGGAGCCACTGCGAGAAGAGCCACACCTGCGGCCGGTGC CACGCCAAGAAGTTCTCCATCGTGGCCGACCTGAGGACGCACGAGAAGCACTGCGGCCGC CGGGACAGGTGGGTGTGCTCCTGCGGGACGAGTTTCTCGAGGAAGGACAAGCTCTTCGCG CACGTCGCCTTGTTCCAAGGTCACACGCCCGCGTTGTCGTCGCCGCTGGAGGAGGAGCCG CCGAAGGCTTGCTCGGACCAGCACCAGACCGGCCGTGCTGGGAGCCGTCGGGAACCAGCG AAAGTCCCAGCTGGCTCAGTGGGCGGCGGCAGCGGCAGCAGCTTCGTGTGGGGTGCCTCG TCCTCAGGGGAGAACAGTGCTCTGGATATCAAAGGTTTTGTTGATGGATGCAGTGGTGAC TTCCTCTCGACGGCGAACTTTGGCTCCTTCAACCTCAGCTTCGGGCCTGCTGACGGGTTC ACAGGAGAGCCTTCTAGTGGTGGTTCGTTCTCGATGCTACCTCCTGAGCACTTTCAGAGT GCTCAGAAGAAGGGGCAGAACTGA