Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d023538_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:10:9348321:9371287:1 gene:Zm00001d023538 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 9 chloroplastic
Sequence	ATGAATCCTTACTTTGTTGGGATTCTTGTCCCCGTCGCGGTCTCCCTGCTGCTCCGCAAG AGGAGAAAGGCCCAAAGGATGAGGGGAGTGCCAGTTGAGGTTGGTGGGGAGCCTGGATAT GCAGTCCGTAACTATCGTTTTGAACAACCTGTTGAGACACACTGGGAGGGGGTGTCCACA CTTGCTGATCTGTTTGAGCAATCTTGCAAAGAGTATGTATACATGCCACTCCTTGGCACA AGGAAGCTCATTTCAAGGGAAACTGAAGCAGCACCTGGTGGGAGATCGTTTGAGAAGCTG CATCTGGGCGAGTATGAGTGGAAGTGTTATGCAGAGTGCTTCAAGAGCGTTTGCAACTTT TCATCTGGACTAATTAGAGTAGGTCACCAGAAGAATGAACGTGTTGCTATTTTTGCTGAG ACACGGGCTGAGTGGCAGATTGGGTTGCAGGCATGCTTCAGACAAAACATTACAGTTGTC ACCATCTATGCCTCATTGGGGGAGGAAGCTTTGTGTCACTCACTAAATGAGACTGAGGTC ACTACTGTAGTTTGTGGTCAGAAAGAACTAAAAAAGTTGATTGATATAAGTGGGCAACTT GACACTGTCAAGCGTGTTGTCTATATCAATGAGGAAGGCATCTCAACTGAAGTTTCTTTA GCTCAAAACTGCACTAGCTGGATAGTTGAATCATTTGAGGAAGTAACTAGGTTAGGAGCT GAAGCACCTGTTGAAGCAAACATGCCTCTACCTTCCGATGTTGCGGTGATAATGTACACA AGTGGTAGCACCGGATTGCCCAAGGGAGTTATGATGACCCACCGCAACGTCCTGGCTACA CTCTCAGCAGTCATGACCATTGTGCCTGCACTTGGCAGTAAAGATATATACTTGGCCTAC CTTCCACTTGCACACATTCTTGAGTTGGCAGCAGAGGCACTAATGGCTGCTGTTGGGGCC TCAATAGGATATGGATCACCTTTGACCCTGATTGATACATCCAATAAAATAAAAAAGGGA ACTCTAGGTGATGCTTCTGCACTAAAGCCAACATTGATGACTGCTGTACCTGCTATACTT GATCGTATTCGTGATGGTGTCAGGAAAAAGGTGGATACAAAGGGTGGTATAGCAAAGCAA TTGTTTGACATTGCCTATAACCGTCGGCTTGCTGCAATCAATGGAAGTTGGCTTGGTGCC TGGGGACTGGAGAAACTCTTGTGGGATACACTTGTGTTTGGAAAGGTGCGTGCTATTTTG GGAGGAAAGATTCGGTTTGTACTTTCAGGTGGAGCACCTCTATCTGGAGATACTCAGAGA TTTATCAATATATGCCTTGGGGCTCCAATAGGGCAAGGTTATGGTCTGACTGAAACTTGT GCTGGAGGGACATTTTCAGAGTATGATGACACATCTGTCGGTCGTGTTGGTGCTCCACTA CCTTGTTCGTATATTAAGTTGATTGACTGGCCTGAGGGTGGATACTTGACTGCTGATTTA CCAATGCCTCGGGGAGAAATTGTCATTGGAGGTCCAAATATAACTAAAGGCTATTTCAAG AATGAAGCTAAAACAAATGAAGTCTACAAGGATGATGAGAAAGGTATGCGATGGTTCTAT TCTGGAGACATCGGACGGTTCCATCCAGATGGCTGCCTTGAAATCATTGACCGTAAGAAA GATATCGTGAAGCTTCAACATGGCGAATATGTATCTCTCGGGAAGGTAGAGGCTGCTTTG ATTGTGAGCCCATATGTGGAGAACATTATGATCCATGCTGATCCTTTCCACAATTACTGT GTTGCTCTCGTGGTGGCTGCACACATTGAGCTGGAAAGCTGGGCTTCGCAGCAAGGAATC AAATACAACGATTTCTCAGATTTGTGCCAGAAGCAAGAGGCTGTTAAAGAAGTGCTTGGA TCTTTAGCAAAGGCTGCGAAGCAAGCGCGACTTGAGAAGTTTGAGATACCAGTCAAAATC AAGCTGATACCAGAGCCATGGACCCCCGAGTCGGGACTCGTCACTGCTGCCCTCAAACTC AAGAGGGAGGTGATCAGGAAGACGTACGAGAACGATCTGGCTGAGTTGTACGCATGA

Peptide Sequence

PEP ID	Zm00001d023538_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:10:9348321:9371287:1 gene:Zm00001d023538 transcript:Zm00001d023538_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 9 chloroplastic
Sequence	MNPYFVGILVPVAVSLLLRKRRKAQRMRGVPVEVGGEPGYAVRNYRFEQPVETHWEGVST LADLFEQSCKEYVYMPLLGTRKLISRETEAAPGGRSFEKLHLGEYEWKCYAECFKSVCNF SSGLIRVGHQKNERVAIFAETRAEWQIGLQACFRQNITVVTIYASLGEEALCHSLNETEV TTVVCGQKELKKLIDISGQLDTVKRVVYINEEGISTEVSLAQNCTSWIVESFEEVTRLGA EAPVEANMPLPSDVAVIMYTSGSTGLPKGVMMTHRNVLATLSAVMTIVPALGSKDIYLAY LPLAHILELAAEALMAAVGASIGYGSPLTLIDTSNKIKKGTLGDASALKPTLMTAVPAIL DRIRDGVRKKVDTKGGIAKQLFDIAYNRRLAAINGSWLGAWGLEKLLWDTLVFGKVRAIL GGKIRFVLSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSEYDDTSVGRVGAPL PCSYIKLIDWPEGGYLTADLPMPRGEIVIGGPNITKGYFKNEAKTNEVYKDDEKGMRWFY SGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPYVENIMIHADPFHNYC VALVVAAHIELESWASQQGIKYNDFSDLCQKQEAVKEVLGSLAKAAKQARLEKFEIPVKI KLIPEPWTPESGLVTAALKLKREVIRKTYENDLAELYA

Transcript Sequence

Transcript ID	Zm00001d023538_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:9348321:9371287:1 gene:Zm00001d023538 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 9 chloroplastic
Sequence	GTGTAAAGTCAATCGGTCCATTTTCTGTCCCTAAGTGGAGTGGGTGCGCTTACTCTGTTC ACCAGGTTTTTGCCTCAGGGCATGTGGATCTGTTAGTTCACCTGCTGCAAGCAAGTATAG CTATAGGGTTGACCAGTGCAGAAGTATGAATCCTTACTTTGTTGGGATTCTTGTCCCCGT CGCGGTCTCCCTGCTGCTCCGCAAGAGGAGAAAGGCCCAAAGGATGAGGGGAGTGCCAGT TGAGGTTGGTGGGGAGCCTGGATATGCAGTCCGTAACTATCGTTTTGAACAACCTGTTGA GACACACTGGGAGGGGGTGTCCACACTTGCTGATCTGTTTGAGCAATCTTGCAAAGAGTA TGTATACATGCCACTCCTTGGCACAAGGAAGCTCATTTCAAGGGAAACTGAAGCAGCACC TGGTGGGAGATCGTTTGAGAAGCTGCATCTGGGCGAGTATGAGTGGAAGTGTTATGCAGA GTGCTTCAAGAGCGTTTGCAACTTTTCATCTGGACTAATTAGAGTAGGTCACCAGAAGAA TGAACGTGTTGCTATTTTTGCTGAGACACGGGCTGAGTGGCAGATTGGGTTGCAGGCATG CTTCAGACAAAACATTACAGTTGTCACCATCTATGCCTCATTGGGGGAGGAAGCTTTGTG TCACTCACTAAATGAGACTGAGGTCACTACTGTAGTTTGTGGTCAGAAAGAACTAAAAAA GTTGATTGATATAAGTGGGCAACTTGACACTGTCAAGCGTGTTGTCTATATCAATGAGGA AGGCATCTCAACTGAAGTTTCTTTAGCTCAAAACTGCACTAGCTGGATAGTTGAATCATT TGAGGAAGTAACTAGGTTAGGAGCTGAAGCACCTGTTGAAGCAAACATGCCTCTACCTTC CGATGTTGCGGTGATAATGTACACAAGTGGTAGCACCGGATTGCCCAAGGGAGTTATGAT GACCCACCGCAACGTCCTGGCTACACTCTCAGCAGTCATGACCATTGTGCCTGCACTTGG CAGTAAAGATATATACTTGGCCTACCTTCCACTTGCACACATTCTTGAGTTGGCAGCAGA GGCACTAATGGCTGCTGTTGGGGCCTCAATAGGATATGGATCACCTTTGACCCTGATTGA TACATCCAATAAAATAAAAAAGGGAACTCTAGGTGATGCTTCTGCACTAAAGCCAACATT GATGACTGCTGTACCTGCTATACTTGATCGTATTCGTGATGGTGTCAGGAAAAAGGTGGA TACAAAGGGTGGTATAGCAAAGCAATTGTTTGACATTGCCTATAACCGTCGGCTTGCTGC AATCAATGGAAGTTGGCTTGGTGCCTGGGGACTGGAGAAACTCTTGTGGGATACACTTGT GTTTGGAAAGGTGCGTGCTATTTTGGGAGGAAAGATTCGGTTTGTACTTTCAGGTGGAGC ACCTCTATCTGGAGATACTCAGAGATTTATCAATATATGCCTTGGGGCTCCAATAGGGCA AGGTTATGGTCTGACTGAAACTTGTGCTGGAGGGACATTTTCAGAGTATGATGACACATC TGTCGGTCGTGTTGGTGCTCCACTACCTTGTTCGTATATTAAGTTGATTGACTGGCCTGA GGGTGGATACTTGACTGCTGATTTACCAATGCCTCGGGGAGAAATTGTCATTGGAGGTCC AAATATAACTAAAGGCTATTTCAAGAATGAAGCTAAAACAAATGAAGTCTACAAGGATGA TGAGAAAGGTATGCGATGGTTCTATTCTGGAGACATCGGACGGTTCCATCCAGATGGCTG CCTTGAAATCATTGACCGTAAGAAAGATATCGTGAAGCTTCAACATGGCGAATATGTATC TCTCGGGAAGGTAGAGGCTGCTTTGATTGTGAGCCCATATGTGGAGAACATTATGATCCA TGCTGATCCTTTCCACAATTACTGTGTTGCTCTCGTGGTGGCTGCACACATTGAGCTGGA AAGCTGGGCTTCGCAGCAAGGAATCAAATACAACGATTTCTCAGATTTGTGCCAGAAGCA AGAGGCTGTTAAAGAAGTGCTTGGATCTTTAGCAAAGGCTGCGAAGCAAGCGCGACTTGA GAAGTTTGAGATACCAGTCAAAATCAAGCTGATACCAGAGCCATGGACCCCCGAGTCGGG ACTCGTCACTGCTGCCCTCAAACTCAAGAGGGAGGTGATCAGGAAGACGTACGAGAACGA TCTGGCTGAGTTGTACGCATGATGGTTCTACTCTTTTTGATACGTTTAGTGTGGAAAATG TGTAGAGTGTCAATGTCACGCTGAGATCTATGGTAATTTGATACCGATTATCGTTCTGGG ATTATTATTATTATTTTGTTCAGTTAGAGGAGATATATAAACCTTGAAGTTTTGAGTTAT ATGGCTTCTCTTGATGCCGAGAAGCT