Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d023536_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:10:9165089:9167073:-1 gene:Zm00001d023536 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oil yellow1 description:Magnesium-chelatase subunit ChlI-1 chloroplastic
Sequence

ATGCCCCTTCTTCCTCTCCTCCCCGTCATGGCTTCCACCTTCTCCCCCACTTCCGCCGCG
AGGGCCCTCCTCCCGGGCTCCACCTCCCGCCCACTCTTCCTCGCCGCTTCAGCTTCCTCA
GGGCGCATTCAACCATCCAGGAAGGGACTGGACTTCCGCCGCGGCCGATTCACCGTCTGC
AATGTCGCCGCTCCCACCGCCGCCGAACAGGAGGCGACGGCGTCGGCCGCGAAGGAGACC
CAGCGCCCCGTGTACCCGTTCGCGGCCATCGTGGGGCAGGACGAGATGAAGCTCTGCCTG
CTGCTCAACGTCATCGACCCCAAGATCGGCGGCGTCATGATCATGGGCGACAGGGGCACG
GGGAAGTCCACCACCGTCCGCTCCCTCGTCGACCTGCTCCCGGACATCCGCGTCGTCGTC
GGCGACCCCTTCAACTCCGACCCGGACGACCCCGAGGTCATGGGCCCCGAGGTCCGCCAG
CGGGTCCTGCAGGGGGACACCGGCCTCCCCGTCACCACCGCCAAGATCACCATGGTCGAC
CTGCCCCTCGGCGCCACCGAGGACCGCGTCTGCGGCACCATTGACATCGAGAAGGCGCTC
ACCGAGGGCGTCAAGGCGTTCGAGCCCGGCCTGCTCGCCAAGGCCAACAGGGGCATACTG
TACGTCGACGAGGTCAACCTGCTGGACGACCACCTCGTCGACGTGCTGCTGGATTCCGCT
GCGTCGGGGTGGAACACGGTGGAGAGGGAGGGTATCTCCATATCCCACCCTGCTCGCTTC
ATCCTCATCGGCTCTGGTAACCCGGAGGAAGGGGAGCTCAGGCCCCAGCTGCTGGACCGG
TTCGGGATGCACGCGCAGGTTGGTACCGTCAGGGACGCCGAGCTCAGGGTGAAGATCGTG
GAGGAGAGGGCTCGTTTCGACAGGGATCCGAAGACGTTCCGTGAGTCGTATCATGACGAG
CAGGAGAAGCTCCAGCAGCAGATATCATCTGCACGGAGTAACCTTGGCGCTGTGCAGATT
GACCATGACCTCCGTGTCAAGATATCCAAGGTGTGCTCTGAGTTGAACGTTGATGGACTC
AGAGGTGACATTGTGACTAACAGGGCTGCCAAGGCGCTGGCTGCGTTGAAAGGAAGGGAC
AGCGTCACCGTGGAGGACATTGCTACTGTCATTCCAAACTGCTTGAGGCATCGGCTCCGC
AAGGATCCGCTTGAATCCATTGACTCGGGTTTACTTGTCATTGAGAAGTTTTATGAAGTC
TTTAGCTAG

Peptide Sequence

PEP ID

Zm00001d023536_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:10:9165089:9167073:-1 gene:Zm00001d023536 transcript:Zm00001d023536_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oil yellow1 description:Magnesium-chelatase subunit ChlI-1 chloroplastic
Sequence

MPLLPLLPVMASTFSPTSAARALLPGSTSRPLFLAASASSGRIQPSRKGLDFRRGRFTVC
NVAAPTAAEQEATASAAKETQRPVYPFAAIVGQDEMKLCLLLNVIDPKIGGVMIMGDRGT
GKSTTVRSLVDLLPDIRVVVGDPFNSDPDDPEVMGPEVRQRVLQGDTGLPVTTAKITMVD
LPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSA
ASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIV
EERARFDRDPKTFRESYHDEQEKLQQQISSARSNLGAVQIDHDLRVKISKVCSELNVDGL
RGDIVTNRAAKALAALKGRDSVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVIEKFYEV
FS

Transcript Sequence

Transcript ID

Zm00001d023536_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:9165089:9167073:-1 gene:Zm00001d023536 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oil yellow1 description:Magnesium-chelatase subunit ChlI-1 chloroplastic
Sequence

ACTAGATAGATGCTGTCATGCTGAGGACGAAGGCAAGCATGTTGGGCACAGCGCCATAGT
ATCAAACTATCATTTTGAGCCGTTTCGCGTACCCTAAAATCAGTGGCAACAGCGCCATAG
CATCGTCAACTCCATCAAGCCGTTACCATCAACAACGATTGCTTGCTGCCGACTGCCAAG
CGGGGCCGGTCAATCCAGAAGTTGGCAGCCTCCAATCGCAGCATCCCTCCGAGATCGCTG
CCCCGTCCCCCTCCCCCGGCTTATCCCCTATCCCCTCCTCCCCCGCTCCTTCCACACAAA
CCTCCATGCCCCTTCTTCCTCTCCTCCCCGTCATGGCTTCCACCTTCTCCCCCACTTCCG
CCGCGAGGGCCCTCCTCCCGGGCTCCACCTCCCGCCCACTCTTCCTCGCCGCTTCAGCTT
CCTCAGGGCGCATTCAACCATCCAGGAAGGGACTGGACTTCCGCCGCGGCCGATTCACCG
TCTGCAATGTCGCCGCTCCCACCGCCGCCGAACAGGAGGCGACGGCGTCGGCCGCGAAGG
AGACCCAGCGCCCCGTGTACCCGTTCGCGGCCATCGTGGGGCAGGACGAGATGAAGCTCT
GCCTGCTGCTCAACGTCATCGACCCCAAGATCGGCGGCGTCATGATCATGGGCGACAGGG
GCACGGGGAAGTCCACCACCGTCCGCTCCCTCGTCGACCTGCTCCCGGACATCCGCGTCG
TCGTCGGCGACCCCTTCAACTCCGACCCGGACGACCCCGAGGTCATGGGCCCCGAGGTCC
GCCAGCGGGTCCTGCAGGGGGACACCGGCCTCCCCGTCACCACCGCCAAGATCACCATGG
TCGACCTGCCCCTCGGCGCCACCGAGGACCGCGTCTGCGGCACCATTGACATCGAGAAGG
CGCTCACCGAGGGCGTCAAGGCGTTCGAGCCCGGCCTGCTCGCCAAGGCCAACAGGGGCA
TACTGTACGTCGACGAGGTCAACCTGCTGGACGACCACCTCGTCGACGTGCTGCTGGATT
CCGCTGCGTCGGGGTGGAACACGGTGGAGAGGGAGGGTATCTCCATATCCCACCCTGCTC
GCTTCATCCTCATCGGCTCTGGTAACCCGGAGGAAGGGGAGCTCAGGCCCCAGCTGCTGG
ACCGGTTCGGGATGCACGCGCAGGTTGGTACCGTCAGGGACGCCGAGCTCAGGGTGAAGA
TCGTGGAGGAGAGGGCTCGTTTCGACAGGGATCCGAAGACGTTCCGTGAGTCGTATCATG
ACGAGCAGGAGAAGCTCCAGCAGCAGATATCATCTGCACGGAGTAACCTTGGCGCTGTGC
AGATTGACCATGACCTCCGTGTCAAGATATCCAAGGTGTGCTCTGAGTTGAACGTTGATG
GACTCAGAGGTGACATTGTGACTAACAGGGCTGCCAAGGCGCTGGCTGCGTTGAAAGGAA
GGGACAGCGTCACCGTGGAGGACATTGCTACTGTCATTCCAAACTGCTTGAGGCATCGGC
TCCGCAAGGATCCGCTTGAATCCATTGACTCGGGTTTACTTGTCATTGAGAAGTTTTATG
AAGTCTTTAGCTAGATTGTTCTTGAGGTAAATGTTCCTTAGTCACAATTTTTGGCGGGAA
CCCTCTTGTTCTGTTACTTTCATAATGTTCTGCTGTTTAATAATATCTGGAGCTTGAATT
GGTATCAATTTTGTGCATCTAGCATCATAATAATGTAGGATCCATTCCTTCCATTTGGAA
TGCATGTTATGAGCATCATAATGCTCTTTGCATTT