Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d023534_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:10:9078177:9084700:1 gene:Zm00001d023534 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:5-formyltetrahydrofolate cyclo-ligase1 description: 5-formyltetrahydrofolate cyclo-ligase1
Sequence

ATGCCGCTCCTCTTCCCCGCCACGCCGCCGCTACCGCTGTGCCGCGCCGCGCGCGTCTCA
CGCCGCGCCACGGCCTCCGTGGCGTCCGCGGCCAGGAGCTCGTCGTCGTCCTCGGCCTCG
TTCGACGCGGCCGCCTTCGAGGCCGAGCGGCTGCGCCTGGACGCCGCGGCGCGGGCCGGG
ATGGAGTCCACCGCCGCGGCAGCGGAGGCCGGCCCGCGGGCCTGGAAGTGGGCGATACGG
AAGCGGGTGTGGGACGCGCTCGAGGCTGAGGGCATCGCGCGGGACCCGCGCCCCGTCCAC
CACCGCATCCCCAACTTCGACGGCGCCCCCGCCGCCGCAGACGCGTTGGGGAGGCTTGAC
ATATTTCAGAAGTCCCATTGTGTAAAGGTCAATCCTGACACACCTCAGAAGCAAGTTCGG
TTCTTAACATTGTCAGGTGATAAAAAGCTGTTGACTCCGCAACCTCGGCTAAGGACAGGA
TTTTTCTCAGTTATGGACTCTCAGATGATACCTGTTGGGTGCATTCCTGAAGCATGCACT
TCTGTTGGTGCAGCTAAATATGGGAGGCCAATTGGTTTAGATGAAAGCCTTAAGGTGGAT
TTGATTGTGATTGGGTCAGTGGCAGTTGATCCAAGTTCAGGAGCACGGTTAGGGAAGGGA
GAGGGATTTGCAGAGCTGGAATATGGAATGCTTCGCTATATGGGAGCTATAGATGATTCA
ACCATGATAGTAACTACTGTGCATGACAAGCAGTTAGTTGATGACATTCCAGTGGAGAAG
CTGCTAGTTCATGATGTGCCAGTTGACATTATCTGCACCCCTACTCAGGTCATCTTCACG
AAGACTACGATCCCAAAGCCACAAGGGATTTACTGGGAAAAGTTATCTCCAGAAAAATTG
GGCCAAATCCGAATTCTAAGAGAGCTGAAGCAACGTATAGAGCAAGAGACAGGAACTATG
CTTCCTTGTGGACCTTCGGAGAAGCTACCGCCAACAGCTCAGAGAAAGCAGAGGTGGCAG
CGGCGACGATGA

Peptide Sequence

PEP ID

Zm00001d023534_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:10:9078177:9084700:1 gene:Zm00001d023534 transcript:Zm00001d023534_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:5-formyltetrahydrofolate cyclo-ligase1 description: 5-formyltetrahydrofolate cyclo-ligase1
Sequence

MPLLFPATPPLPLCRAARVSRRATASVASAARSSSSSSASFDAAAFEAERLRLDAAARAG
MESTAAAAEAGPRAWKWAIRKRVWDALEAEGIARDPRPVHHRIPNFDGAPAAADALGRLD
IFQKSHCVKVNPDTPQKQVRFLTLSGDKKLLTPQPRLRTGFFSVMDSQMIPVGCIPEACT
SVGAAKYGRPIGLDESLKVDLIVIGSVAVDPSSGARLGKGEGFAELEYGMLRYMGAIDDS
TMIVTTVHDKQLVDDIPVEKLLVHDVPVDIICTPTQVIFTKTTIPKPQGIYWEKLSPEKL
GQIRILRELKQRIEQETGTMLPCGPSEKLPPTAQRKQRWQRRR

Transcript Sequence

Transcript ID

Zm00001d023534_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:9078177:9084700:1 gene:Zm00001d023534 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:5-formyltetrahydrofolate cyclo-ligase1 description: 5-formyltetrahydrofolate cyclo-ligase1
Sequence

GTGAAACCCGCTCTCCCGTTTTCTATAATTGCGAAAATATCCCGAATCCGTGGCTTCCCT
TCCCTGGCGCGCGAGTGACGAGCGTGCGCAGAAGCTAGCCAAGCGATGCCGCTCCTCTTC
CCCGCCACGCCGCCGCTACCGCTGTGCCGCGCCGCGCGCGTCTCACGCCGCGCCACGGCC
TCCGTGGCGTCCGCGGCCAGGAGCTCGTCGTCGTCCTCGGCCTCGTTCGACGCGGCCGCC
TTCGAGGCCGAGCGGCTGCGCCTGGACGCCGCGGCGCGGGCCGGGATGGAGTCCACCGCC
GCGGCAGCGGAGGCCGGCCCGCGGGCCTGGAAGTGGGCGATACGGAAGCGGGTGTGGGAC
GCGCTCGAGGCTGAGGGCATCGCGCGGGACCCGCGCCCCGTCCACCACCGCATCCCCAAC
TTCGACGGCGCCCCCGCCGCCGCAGACGCGTTGGGGAGGCTTGACATATTTCAGAAGTCC
CATTGTGTAAAGGTCAATCCTGACACACCTCAGAAGCAAGTTCGGTTCTTAACATTGTCA
GGTGATAAAAAGCTGTTGACTCCGCAACCTCGGCTAAGGACAGGATTTTTCTCAGTTATG
GACTCTCAGATGATACCTGTTGGGTGCATTCCTGAAGCATGCACTTCTGTTGGTGCAGCT
AAATATGGGAGGCCAATTGGTTTAGATGAAAGCCTTAAGGTGGATTTGATTGTGATTGGG
TCAGTGGCAGTTGATCCAAGTTCAGGAGCACGGTTAGGGAAGGGAGAGGGATTTGCAGAG
CTGGAATATGGAATGCTTCGCTATATGGGAGCTATAGATGATTCAACCATGATAGTAACT
ACTGTGCATGACAAGCAGTTAGTTGATGACATTCCAGTGGAGAAGCTGCTAGTTCATGAT
GTGCCAGTTGACATTATCTGCACCCCTACTCAGGTCATCTTCACGAAGACTACGATCCCA
AAGCCACAAGGGATTTACTGGGAAAAGTTATCTCCAGAAAAATTGGGCCAAATCCGAATT
CTAAGAGAGCTGAAGCAACGTATAGAGCAAGAGACAGGAACTATGCTTCCTTGTGGACCT
TCGGAGAAGCTACCGCCAACAGCTCAGAGAAAGCAGAGGTGGCAGCGGCGACGATGAGAC
TTTTAAATGACTGCCCCGTGCGTTGCGACGGCTTACAACAATACCCATGTAAACTATCCA
CCAAAAAAATTT