Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d023525_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:8729371:8731164:-1 gene:Zm00001d023525 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCACCGCCCTCGTCCCTAGCAGCCGCGCTCAAGCCGGTGCTAATCCACCTCCTGCGC GGCGGCTCCGACCTCGCGTCCGTCGCCGCCACGCACGCTAAGCTTGTCAAGGCCGGCATC GCGACCCCCCTCTCCTCCTCCAATCATCTCCTCGCCGCCTACTGTCGCTGCGGCGCGATT GGTCGCGCCCGCGACCTGTTCGACGGAATGCGGGACCGGGACGTCGTCTCCTGGACGACG CTCATGTCCGGGTACGCCGCTGCCGCCCGGCCCCGGGACGCCGTGTCCCTCCTCCGCGCC ATGGGGTGCAGCGGCGTGCGGCCTAACGCGGTCACCTTCTCGACGGCCGCCTGCACGTGC GCGCGCCTCGCGGACGCAGAACTCGGCCGGCAGGTGCACGCCCAAGCGGAGATCGCTGGG TGCGCACGCGACACAGTCGTCGCCACTGCGCTCGTCGACATGTACGGCAAGTCCGGCAGC GTCGAGGACGCGCGCGCGGTGTTCGACGCCATGGCTGCGCCAGCGAGGAACGCTGTGTCG TGGGGCGCTATGCTGGCCGTGTACGTGCAGAACGCGCTCGGGAACGAGGCGGTCGAGCTC TTCGCGGAGCTCAGGACGTGTGGCGGTGGCATGGCGCCCAACCACTTCATGCTGGCGAGC GTGGTGAGCGCGTGCGCAGGCATGGCACGTCTGGGCATCGGTAGGTGCGTCCATGGCGCT GTCCTTCGGCTTGGGTATGGAAACAATGACGTGATTTCGGTGGCTTTGGTCGACATGTAC TCCAAGTGCGGGCGCTACGAGTACTCAAGAAAGGTGTTTGACAGGATCGAGCAACCATCC GTCGTCACTTACACCTCCATCATTGTCGCTGCAGCAAAGTACGGCCGCTGGACGTGCGCG CTTACTTTGTTCAACGAGATGGTAGATCAAGGTGTGCAGCCAAATGATGTCACTTTGCTC GGTGTCATGCATGCTTGCAGCCATTCTGGCCTTGTTGACACTGGCCTTCAGCTCCTCCGC TCCATGCAGAGCAGATACGGCGTTGCTCCGTGCCCCAGCCACTACACATCTGCGGTTGAC ATGCTGGGCCGGGCAGGGCGGCTCGAGGAGGCATTCGAGCTGGCCAAGGAGGCGCAGCTT GAAGGCAACGATGCCCTCTTGCTGTGGAACTCCTTGCTGTCAGCTTGCCGGACACATAAG CGCCTAGACCTAGCAACCATGGCTGGCCAGAGGGTTTATGAGTTCAATAACCAGCAGGAT GTAGCAGCTGGGCTGGTAGTGATGTCAAATGCATATATTTCAGCCGGTCAGATCGATAAT GCTGCCGCTGTGCGATCAAGCATGAGGCTGCGTGGCATACGGAAGGATCCCGGGTGCAGC TGGATTGAAGTAAAGGATACCCCCCATGTGTTCTATGCTGGTGCAGTATCATGCGCTGGT GCGTGGGCAGATAAAGTTCTGATGTTGCTAGATGAATTGGAGAGTAAGATGAGGGAGAGA GGTTACAGGGGGAGATTAGGGAGTGCTAGAGTATCCGATGCACATGAAGATGAGGAGGAA GGGAAAGGTGTGATGGTTGGTGTGCACAGTGAGATTCTTGCTTTAGCGTTTGGTTTGCTA GTTGTCCCGAATGGGATGACCATCAGGGTGATGAAGAACCTGAGGATGTGCAGTGATTGC CATGAGGTGTTCAAGCTCATCAGCGCCATTGTTGAGAGCGAGTTCGTGGTCAGGGATCTG AACAGGTTCCACCATTTCAAGCTGGGGTCATGTTCTTGCAATGACTACTGGTGA

Peptide Sequence

PEP ID	Zm00001d023525_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:8729371:8731164:-1 gene:Zm00001d023525 transcript:Zm00001d023525_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MAPPSSLAAALKPVLIHLLRGGSDLASVAATHAKLVKAGIATPLSSSNHLLAAYCRCGAI GRARDLFDGMRDRDVVSWTTLMSGYAAAARPRDAVSLLRAMGCSGVRPNAVTFSTAACTC ARLADAELGRQVHAQAEIAGCARDTVVATALVDMYGKSGSVEDARAVFDAMAAPARNAVS WGAMLAVYVQNALGNEAVELFAELRTCGGGMAPNHFMLASVVSACAGMARLGIGRCVHGA VLRLGYGNNDVISVALVDMYSKCGRYEYSRKVFDRIEQPSVVTYTSIIVAAAKYGRWTCA LTLFNEMVDQGVQPNDVTLLGVMHACSHSGLVDTGLQLLRSMQSRYGVAPCPSHYTSAVD MLGRAGRLEEAFELAKEAQLEGNDALLLWNSLLSACRTHKRLDLATMAGQRVYEFNNQQD VAAGLVVMSNAYISAGQIDNAAAVRSSMRLRGIRKDPGCSWIEVKDTPHVFYAGAVSCAG AWADKVLMLLDELESKMRERGYRGRLGSARVSDAHEDEEEGKGVMVGVHSEILALAFGLL VVPNGMTIRVMKNLRMCSDCHEVFKLISAIVESEFVVRDLNRFHHFKLGSCSCNDYW

Transcript Sequence

Transcript ID	Zm00001d023525_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:8729371:8731164:-1 gene:Zm00001d023525 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCACCGCCCTCGTCCCTAGCAGCCGCGCTCAAGCCGGTGCTAATCCACCTCCTGCGC GGCGGCTCCGACCTCGCGTCCGTCGCCGCCACGCACGCTAAGCTTGTCAAGGCCGGCATC GCGACCCCCCTCTCCTCCTCCAATCATCTCCTCGCCGCCTACTGTCGCTGCGGCGCGATT GGTCGCGCCCGCGACCTGTTCGACGGAATGCGGGACCGGGACGTCGTCTCCTGGACGACG CTCATGTCCGGGTACGCCGCTGCCGCCCGGCCCCGGGACGCCGTGTCCCTCCTCCGCGCC ATGGGGTGCAGCGGCGTGCGGCCTAACGCGGTCACCTTCTCGACGGCCGCCTGCACGTGC GCGCGCCTCGCGGACGCAGAACTCGGCCGGCAGGTGCACGCCCAAGCGGAGATCGCTGGG TGCGCACGCGACACAGTCGTCGCCACTGCGCTCGTCGACATGTACGGCAAGTCCGGCAGC GTCGAGGACGCGCGCGCGGTGTTCGACGCCATGGCTGCGCCAGCGAGGAACGCTGTGTCG TGGGGCGCTATGCTGGCCGTGTACGTGCAGAACGCGCTCGGGAACGAGGCGGTCGAGCTC TTCGCGGAGCTCAGGACGTGTGGCGGTGGCATGGCGCCCAACCACTTCATGCTGGCGAGC GTGGTGAGCGCGTGCGCAGGCATGGCACGTCTGGGCATCGGTAGGTGCGTCCATGGCGCT GTCCTTCGGCTTGGGTATGGAAACAATGACGTGATTTCGGTGGCTTTGGTCGACATGTAC TCCAAGTGCGGGCGCTACGAGTACTCAAGAAAGGTGTTTGACAGGATCGAGCAACCATCC GTCGTCACTTACACCTCCATCATTGTCGCTGCAGCAAAGTACGGCCGCTGGACGTGCGCG CTTACTTTGTTCAACGAGATGGTAGATCAAGGTGTGCAGCCAAATGATGTCACTTTGCTC GGTGTCATGCATGCTTGCAGCCATTCTGGCCTTGTTGACACTGGCCTTCAGCTCCTCCGC TCCATGCAGAGCAGATACGGCGTTGCTCCGTGCCCCAGCCACTACACATCTGCGGTTGAC ATGCTGGGCCGGGCAGGGCGGCTCGAGGAGGCATTCGAGCTGGCCAAGGAGGCGCAGCTT GAAGGCAACGATGCCCTCTTGCTGTGGAACTCCTTGCTGTCAGCTTGCCGGACACATAAG CGCCTAGACCTAGCAACCATGGCTGGCCAGAGGGTTTATGAGTTCAATAACCAGCAGGAT GTAGCAGCTGGGCTGGTAGTGATGTCAAATGCATATATTTCAGCCGGTCAGATCGATAAT GCTGCCGCTGTGCGATCAAGCATGAGGCTGCGTGGCATACGGAAGGATCCCGGGTGCAGC TGGATTGAAGTAAAGGATACCCCCCATGTGTTCTATGCTGGTGCAGTATCATGCGCTGGT GCGTGGGCAGATAAAGTTCTGATGTTGCTAGATGAATTGGAGAGTAAGATGAGGGAGAGA GGTTACAGGGGGAGATTAGGGAGTGCTAGAGTATCCGATGCACATGAAGATGAGGAGGAA GGGAAAGGTGTGATGGTTGGTGTGCACAGTGAGATTCTTGCTTTAGCGTTTGGTTTGCTA GTTGTCCCGAATGGGATGACCATCAGGGTGATGAAGAACCTGAGGATGTGCAGTGATTGC CATGAGGTGTTCAAGCTCATCAGCGCCATTGTTGAGAGCGAGTTCGTGGTCAGGGATCTG AACAGGTTCCACCATTTCAAGCTGGGGTCATGTTCTTGCAATGACTACTGGTGA