Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d023501_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:10:7467251:7471987:1 gene:Zm00001d023501 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DEAD-box ATP-dependent RNA helicase family protein

Sequence

ATGTACCTGACCTCGTGTAGTCGCTTGGCCCAGCCGTCGAAAAGTTCCGTTGCTCTGCCG
GAGTCGGGAGAGTCGATGTACGCCGCCGCCCGCGTGGAGGTGGAAGCGGATCGGAAGAAG
GAAAAGGTGGATGAGACGGAGAGGATGGCAAGGGAGAAGAAAAATACACATGAAAAGGAG
CAGATTCGCAAGGTGGTGATGGGGAAGCGGAAGCGGAACGAGGATGAGTTGGGGATGGAA
GAGAAGCAGATGATCGCGGAGAAAGAGAAAGAGGAGAAGGTGAAGAAGGGCAATGGAGGA
GGAATTCTGACTACCAAACTTTTCTCAGAGCTCTACATATCCGAGCTCACTGCCAAGGCG
ATCAGAGAGATGAACTACAGCCACCTCACCGAGATTCAAGCTAGATCAATACCGCATCTT
ATGCTAGGAAATGATGTGCTGGGTTCAGCCAAAACAGGATCAGGGAAGACCCTTGCCTTC
CTTATACCAGCCATTGAACTGCTGCACAAAGCGTCCTTCATGCCAAGGAACGGGACTGGA
GTTATTGTAGTTTGCCCAACAAGGGAGCTTGCTATGCAGACACACAATGTTGCCAAAGAA
TTAATGAAGTATCATTCACAGACTCTTGGTTATGTAATTGGTGGCACTAACATGAGAAAT
GATGCCAATCAGCTTCTGAAAGGGATCAATCTCTTAGTTGCAACTCCAGGCAGGCTTCTG
GATCATCTGCGAAATACTAGAAGTTTCAACTACAAACGGCTACAGGATAGGCAAACAGTT
CTTTTTTCTGCCACACAGAATCAAAAGGTTGTTGAATTTGCGAATTTTACGTTTGGGCAA
AATGAAGAAAGACAAAAGAAACTTGTTTATGTTGGAGTTGATGATTCTAAATTAAAGCCT
ACTGTTGAGGGCTTGCAGCAGGGTTACTGTGTCATTCCTAGCGAGAAAAGGTTTCTGGTT
CTGTATGCTTTCCTAAGAAGGATGCAGCTTAGGAAGGAGGATCTGAAGGTCATGGTGTTC
TTTTCATCATGTAGCTCAGTCAAATTCCATGCAGAATTTCTAAATTTCCTCGGGATAGGG
TGTTATGATATCCATGGGCAACAGAAGCAGCAGAAGCGGACTAGTACATTCTTCCAATTT
TTGAAGGAGAAAAATGGCATCTTATTATGCACAAACGTGGCAGCTCGTGGGCTTGATATT
CCTGATGTGGACTATATTGTGCAATTTGATCCTCCAGATGACCCAAAGGATTACATTCAC
AGGGTTGGTCGCACTGCCCGAGGTGACAAAGGCAAAGGAAGTGCATTATTGTTCTTACTA
CCGGAAGAATTGAAGTTGCTTATTTACCTGCAGGCCGCCAAAATTTCTCTGACTGAATAT
GTTTTCAGTGAAAAGCACGTGCCAAAATCGCAATCACAACTTGAGGACGTTGTCGGTGGG
AATTACTTCTTAAACCAGTCAGCGAAGGAAGCCTACAGGTCCTACCTTTTGTCGTACAAC
TCGCATTCTATGAAAGACATTTTTGATGTCCATCAACTTGATCTCAAGAAAGTTGCTGCA
TCCTTCTGTTTCAAGAACCCTCCTAAAGTGAATCTGGACCTGGACAGTAGCTCATCAAAA
CATCGAAAGATGAGGAAAGCGGACGGTGCAAATAGGCATGGAATTGGTCCTTCGACCCCC
TACGGAAGGAGCGGCCGTTACGGTTCCAGGCAGTTGGCAAGATTCTAG

Peptide Sequence

PEP ID

Zm00001d023501_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:10:7467251:7471987:1 gene:Zm00001d023501 transcript:Zm00001d023501_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DEAD-box ATP-dependent RNA helicase family protein

Sequence

MYLTSCSRLAQPSKSSVALPESGESMYAAARVEVEADRKKEKVDETERMAREKKNTHEKE
QIRKVVMGKRKRNEDELGMEEKQMIAEKEKEEKVKKGNGGGILTTKLFSELYISELTAKA
IREMNYSHLTEIQARSIPHLMLGNDVLGSAKTGSGKTLAFLIPAIELLHKASFMPRNGTG
VIVVCPTRELAMQTHNVAKELMKYHSQTLGYVIGGTNMRNDANQLLKGINLLVATPGRLL
DHLRNTRSFNYKRLQDRQTVLFSATQNQKVVEFANFTFGQNEERQKKLVYVGVDDSKLKP
TVEGLQQGYCVIPSEKRFLVLYAFLRRMQLRKEDLKVMVFFSSCSSVKFHAEFLNFLGIG
CYDIHGQQKQQKRTSTFFQFLKEKNGILLCTNVAARGLDIPDVDYIVQFDPPDDPKDYIH
RVGRTARGDKGKGSALLFLLPEELKLLIYLQAAKISLTEYVFSEKHVPKSQSQLEDVVGG
NYFLNQSAKEAYRSYLLSYNSHSMKDIFDVHQLDLKKVAASFCFKNPPKVNLDLDSSSSK
HRKMRKADGANRHGIGPSTPYGRSGRYGSRQLARF

Transcript Sequence

Transcript ID

Zm00001d023501_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:7467251:7471987:1 gene:Zm00001d023501 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DEAD-box ATP-dependent RNA helicase family protein

Sequence

CCCCACGTCTGCAACCCTAGCGAGCCGCCGCCCGCCGCAGTTCGACTTTAGTCGGTCTGA
GTCCTGCAGCCCCTGGCGCCGCTATGTACCTGACCTCGTGTAGTCGCTTGGCCCAGCCGT
CGAAAAGTTCCGTTGCTCTGCCGGAGTCGGGAGAGTCGATGTACGCCGCCGCCCGCGTGG
AGGTGGAAGCGGATCGGAAGAAGGAAAAGGTGGATGAGACGGAGAGGATGGCAAGGGAGA
AGAAAAATACACATGAAAAGGAGCAGATTCGCAAGGTGGTGATGGGGAAGCGGAAGCGGA
ACGAGGATGAGTTGGGGATGGAAGAGAAGCAGATGATCGCGGAGAAAGAGAAAGAGGAGA
AGGTGAAGAAGGGCAATGGAGGAGGAATTCTGACTACCAAACTTTTCTCAGAGCTCTACA
TATCCGAGCTCACTGCCAAGGCGATCAGAGAGATGAACTACAGCCACCTCACCGAGATTC
AAGCTAGATCAATACCGCATCTTATGCTAGGAAATGATGTGCTGGGTTCAGCCAAAACAG
GATCAGGGAAGACCCTTGCCTTCCTTATACCAGCCATTGAACTGCTGCACAAAGCGTCCT
TCATGCCAAGGAACGGGACTGGAGTTATTGTAGTTTGCCCAACAAGGGAGCTTGCTATGC
AGACACACAATGTTGCCAAAGAATTAATGAAGTATCATTCACAGACTCTTGGTTATGTAA
TTGGTGGCACTAACATGAGAAATGATGCCAATCAGCTTCTGAAAGGGATCAATCTCTTAG
TTGCAACTCCAGGCAGGCTTCTGGATCATCTGCGAAATACTAGAAGTTTCAACTACAAAC
GGCTACAGGATAGGCAAACAGTTCTTTTTTCTGCCACACAGAATCAAAAGGTTGTTGAAT
TTGCGAATTTTACGTTTGGGCAAAATGAAGAAAGACAAAAGAAACTTGTTTATGTTGGAG
TTGATGATTCTAAATTAAAGCCTACTGTTGAGGGCTTGCAGCAGGGTTACTGTGTCATTC
CTAGCGAGAAAAGGTTTCTGGTTCTGTATGCTTTCCTAAGAAGGATGCAGCTTAGGAAGG
AGGATCTGAAGGTCATGGTGTTCTTTTCATCATGTAGCTCAGTCAAATTCCATGCAGAAT
TTCTAAATTTCCTCGGGATAGGGTGTTATGATATCCATGGGCAACAGAAGCAGCAGAAGC
GGACTAGTACATTCTTCCAATTTTTGAAGGAGAAAAATGGCATCTTATTATGCACAAACG
TGGCAGCTCGTGGGCTTGATATTCCTGATGTGGACTATATTGTGCAATTTGATCCTCCAG
ATGACCCAAAGGATTACATTCACAGGGTTGGTCGCACTGCCCGAGGTGACAAAGGCAAAG
GAAGTGCATTATTGTTCTTACTACCGGAAGAATTGAAGTTGCTTATTTACCTGCAGGCCG
CCAAAATTTCTCTGACTGAATATGTTTTCAGTGAAAAGCACGTGCCAAAATCGCAATCAC
AACTTGAGGACGTTGTCGGTGGGAATTACTTCTTAAACCAGTCAGCGAAGGAAGCCTACA
GGTCCTACCTTTTGTCGTACAACTCGCATTCTATGAAAGACATTTTTGATGTCCATCAAC
TTGATCTCAAGAAAGTTGCTGCATCCTTCTGTTTCAAGAACCCTCCTAAAGTGAATCTGG
ACCTGGACAGTAGCTCATCAAAACATCGAAAGATGAGGAAAGCGGACGGTGCAAATAGGC
ATGGAATTGGTCCTTCGACCCCCTACGGAAGGAGCGGCCGTTACGGTTCCAGGCAGTTGG
CAAGATTCTAGAAAGGATATTACATATTGTAGGAAGATAAATTCCGATGTTGGAAATAGA
GATTCTAGCTAGGAAGGATATTAGTAGGAAGATAAGTTCCGATGTTGGAAATCGTCATCT
AATTTTTTTTTATTTAGACGATCAGGAATTTTTATAGCTTTAGGGCTCGTTCGGTTATTC
CCAAAACATATGGATTGGATAGGATTGGAAAAAATTGAGAAGGAGTTTGACTTGTTTGGG
ATTCAAACCCATCCAATCCCGCTCAATCCACATGGATTGAGAGCTAACCGAACAAGGCCT
TATGGACATGCAAGATCTTAGATAATTCAAGGTTCCGTGTAAATGAATGAATT