Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d023498_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:7370667:7371884:1 gene:Zm00001d023498 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein LINE-1
Sequence	ATGGCGTCGTCGGCTTCCGCCGGGCAGGGGCAAGGCAGGCGCGTCGAGCCCGTCCGCGCC GCCACCGGCATGGGCGCTCTGCCCCTGGACGCCCTGTACGACATCCTGCTTCGCCTCCCG GCCAAGGAACTCTGCCGCCTCCGCTCGGTGTGCCGGCCGTGGCGCTCCCTGCTCTCCGAC CCCGCGTTCGCCGCCGCCCACGCAGCACGCTACCCCGAGCCACTCATCATCGTCGGCTAC AACTACAACGACAGTGCTCCCCCTCCAGAGAGCGACGAGCGTGACTGGACGAAACCAAGG AGGTACCAATGCGTCATCAGCGTGATGGATCTGACGGGACACGTGGTGAAGAACCTGCGC GTGGACGGCCACATCGCGAGCATGTCGCTCAGCCTCGCCTGCGTGAAGAGGACCGGAGAC GGCAGCTGCCGGCTGGTGAACCCGGCCACGGGAGCCGTGCACCACGTGCCCGAAGAGGAC CCGCCGTACGGCTACAGCGACAGGCTGTGCCCGTTTGGGCAGGTTGCCAGCACAAGGGAG TTCAAGGTGCTCCGGAAGGTTTCCTACTCGCTCAACGGCAACCCTCGTGTCCTCTACGAG ATCTGCACCGTTGCCGGCACCGGCAGGAGCAATGCGCAGTGGAGGATGATTCAGGACCAT CCGCACCGCATCGACATCGATTGGCGCGACAAGGCCAGCGTGGTCATCGACGGGGTTGTC TACTTCCTCAGCAAGAACTACGCGTCTTCTTCTTCTTCTGCTGGATCTGAGGAGCAAGAC TGGATAGCGTCGTTCGACCTTGACGCAGAGAGGTGGAGGCCGAATATCAGGGGACCCCAA AGCCTTACCGTCGTCAACAATGGAAACGACAACGGGCTGGCTGTTGACGAGGAGCTTTCG TTAACCAACCTGAATGGCTCACTGGTTATCGTCCATCTCCAATCTCCTCCCTGCATGAAC CTCTGGTATCTGCTGGACTCAGAGAAGGGCCTCTGGGTCAGGCAGTACAGCATTCAGGTT GAAGAATGGGACTGCAGCCTCTCGTGCTTCACTCCATTGATCGTGCTAGACGATGGGAGG ATCGTCATACATGTCGAAGGGTCGGAGATGTTGGAGATCTATGACCCCAAAACCAACAAG TTGTCCAGCGTCGCCGACACGGGTGTCAGCAGCGCAGTTAGTGTGTACACAGGAACCTTG CTCAGCTTAGAGTGGTGA

Peptide Sequence

PEP ID	Zm00001d023498_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:7370667:7371884:1 gene:Zm00001d023498 transcript:Zm00001d023498_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein LINE-1
Sequence	MASSASAGQGQGRRVEPVRAATGMGALPLDALYDILLRLPAKELCRLRSVCRPWRSLLSD PAFAAAHAARYPEPLIIVGYNYNDSAPPPESDERDWTKPRRYQCVISVMDLTGHVVKNLR VDGHIASMSLSLACVKRTGDGSCRLVNPATGAVHHVPEEDPPYGYSDRLCPFGQVASTRE FKVLRKVSYSLNGNPRVLYEICTVAGTGRSNAQWRMIQDHPHRIDIDWRDKASVVIDGVV YFLSKNYASSSSSAGSEEQDWIASFDLDAERWRPNIRGPQSLTVVNNGNDNGLAVDEELS LTNLNGSLVIVHLQSPPCMNLWYLLDSEKGLWVRQYSIQVEEWDCSLSCFTPLIVLDDGR IVIHVEGSEMLEIYDPKTNKLSSVADTGVSSAVSVYTGTLLSLEW

Transcript Sequence

Transcript ID	Zm00001d023498_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:7370667:7371884:1 gene:Zm00001d023498 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein LINE-1
Sequence	ATGGCGTCGTCGGCTTCCGCCGGGCAGGGGCAAGGCAGGCGCGTCGAGCCCGTCCGCGCC GCCACCGGCATGGGCGCTCTGCCCCTGGACGCCCTGTACGACATCCTGCTTCGCCTCCCG GCCAAGGAACTCTGCCGCCTCCGCTCGGTGTGCCGGCCGTGGCGCTCCCTGCTCTCCGAC CCCGCGTTCGCCGCCGCCCACGCAGCACGCTACCCCGAGCCACTCATCATCGTCGGCTAC AACTACAACGACAGTGCTCCCCCTCCAGAGAGCGACGAGCGTGACTGGACGAAACCAAGG AGGTACCAATGCGTCATCAGCGTGATGGATCTGACGGGACACGTGGTGAAGAACCTGCGC GTGGACGGCCACATCGCGAGCATGTCGCTCAGCCTCGCCTGCGTGAAGAGGACCGGAGAC GGCAGCTGCCGGCTGGTGAACCCGGCCACGGGAGCCGTGCACCACGTGCCCGAAGAGGAC CCGCCGTACGGCTACAGCGACAGGCTGTGCCCGTTTGGGCAGGTTGCCAGCACAAGGGAG TTCAAGGTGCTCCGGAAGGTTTCCTACTCGCTCAACGGCAACCCTCGTGTCCTCTACGAG ATCTGCACCGTTGCCGGCACCGGCAGGAGCAATGCGCAGTGGAGGATGATTCAGGACCAT CCGCACCGCATCGACATCGATTGGCGCGACAAGGCCAGCGTGGTCATCGACGGGGTTGTC TACTTCCTCAGCAAGAACTACGCGTCTTCTTCTTCTTCTGCTGGATCTGAGGAGCAAGAC TGGATAGCGTCGTTCGACCTTGACGCAGAGAGGTGGAGGCCGAATATCAGGGGACCCCAA AGCCTTACCGTCGTCAACAATGGAAACGACAACGGGCTGGCTGTTGACGAGGAGCTTTCG TTAACCAACCTGAATGGCTCACTGGTTATCGTCCATCTCCAATCTCCTCCCTGCATGAAC CTCTGGTATCTGCTGGACTCAGAGAAGGGCCTCTGGGTCAGGCAGTACAGCATTCAGGTT GAAGAATGGGACTGCAGCCTCTCGTGCTTCACTCCATTGATCGTGCTAGACGATGGGAGG ATCGTCATACATGTCGAAGGGTCGGAGATGTTGGAGATCTATGACCCCAAAACCAACAAG TTGTCCAGCGTCGCCGACACGGGTGTCAGCAGCGCAGTTAGTGTGTACACAGGAACCTTG CTCAGCTTAGAGTGGTGA