Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d023479_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:10:6924519:6930183:1 gene:Zm00001d023479 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative HLH DNA-binding domain superfamily protein
Sequence	ATGGCGGTTGGGGACGCGCTGCGCCGGCTCTGCGAGGAGGTCGGCTGGTCCTACGCCGTC TTCTGGAAGGCCATCGGCGCCGCCGACCCTGTGCATTTGGTGTGGGAGGACGGTTGCTGC GGCCACGTGTCATGCTCCGCCGGGTCTGAGGCTCCTGAAGCTGGGTGCGAGCTGGGCACC AGTGTGTGCACGCTTGTTAGGAAGGTCATGACCTCGCAAATTCATGTTGTTGGTGAGGGT ACCATTGGCCGTGCTGCTTTCACCGGAAATCATCAATGGATTGTCCATGATCCTGCCAAT GATCACAATCTCAGACCCGAGGTTTCTGCTGAGATGAATCATCAGTTTGCAGCTGGCATT CAGACTATTGCAATTATTCCCGTGTTACCACGAGGTGTACTGCAGCTAGGTGCGACAAGT GTGGTAATGGAAAATACCAACCTTGTGCTCCAGTATAAGAACCTGTGTTCTCAGCTAAAC AATCGGTCGAGTATGGCTTCATCGTCATCTGTTAAAAATGATTTGAACCAGAAAATTCAG TCACGCCCTTTGAATGGCCTCACGAGTATACACCCTGCAGATACACGCTCAAAGTTTTTT AGTGGACCCCCATTGACATATCAACAATGTTATGGTCCTGATGGCAGAACTGTGTCTAGT AGTACATTGGCAAACATGGGCAGTAATGCTTCAATGCTTATGGTTGCACAAAGAAATGGC CAAGTGGGTAAAGAACACATTGTATATGCTCCTGACATGAGGTTCAGACCACAAAACCCT TACTGTGACAGGAGAGTTGGGAGTAACACCCAAAATAGTGTTGTGAGCTCTGGTTTTATC TCGTCTATCTCAGCATCAATGGAAAGGCATCCATTAATGACCAACAATCGACAGTTAGAA CAAGGAAACACTGGAGAACCATCAGATTCCAGAAGTGTTCTCTTGAAATCTCTCGCATAC CATAACCCTTTAGTGCATGAAAACACAAACATGACTTTGTTGCATGGAAGAGGCCAGGTG CCAGGCTTTGTTAATGGTCATGGGGGTTTTGATTTTCTCCCAGAAGGTACTAGAGTAGTC AAGAGTAACCTGTATGGCAGCACAACAAATCAAATTTTAGATCAAATATGCAGTTCTACT TCTGGGATGAAAGGGCACGGACCAACTATTTCATATAAAATCCCCCAACCTACCCAATTT GTTGGAAAAACGGAGAGTTCCAAGAGAGAGACATGTCAAGCTTCTGTTGCTCTGTTGTCT GACTCTGATATTCAGGTTTCTAGTGTCTTGAAAACAGCCATTTCCCAAGAGAATCAGACG AGTAGATCTGATCTTATTGGCTCAAAAAAGGCTAATGAAGTGCATGATCCTACTGATGCA ATTGTTCAAGCTGTCAAGAATATGGATCGCCGCAGACTCCCAGACATATCTAACGAGAGA TCACCCCCATTCCTTATGGATCCTGCTGCAGAAAGTGATTTGTTTGACATGTTTGGTTCT GAATTTCATCATTTGTGTCACAATGTGGATAATGATCTTACCTGGAAAGCTGCAAAACCT GAGAATTCAAATAGAGATGTACCTGAATTCTCTGATCATCTTGGTTCCTCTCCAGCCTTC AATTCAGTGGATGACGAGTTCCCTTATTCTGGGATCTTCTCACTAACTGATACCGACCAA CTGTTGGATGCGGTTGTCTCTAATGCCAATCCTGGTGGCAAGCAGATATCTGGTGACAGC GCTTCTTGCAAGACTTCAGTGACAGATATTCCTAGCACTTCGTATTGTCGCTTAAAAGAG CCAAAGCAGTCTGAATCATCTGCTCCTCCTTTGCTAATCAAGAATGAGTTAGCTGTTTCA AATTTTGTTAAACATCCATCTTTCCCAGAAAAGGCAGCGGATGGCTGTCTTTCTCAAAAT AATGCAATACAGAAATCTCAGATACGCCTCTGGATTGAGAGCGGACAGAACTTGAAATGT GAAAGTGCCTCAGCCTCAAACAGCAAGGGCGTTGATACATCAAGCAAGGCTAGTCGAAAG AGGTCTCGACCAGGAGAGAATCCTAAGCCACGACCAAAGGACCGCCAGCTTATTCAGGAT CGTATAAAGGAGCTCCGGGAACTCGTACCTAATGGGGCAAAGTGTAGCATTGATGCCTTG TTGGAGAAGACCATTAAGCACATGGTTTTCTTGCAAAGTGTGACAAAGCATGCAGATAAC CTCAAGGACTCAAATGAATCTAAGATTCTTGGTGGTGAGAATGGTCCATTAAAAGACTAC TTCGAAGGTGGTGCGACTTGGGCCTTTGATGTTGGTAGTCAATCTATGACGTGTCCAATC ATTGTTGAGGATCTTGATCGGCCTCGTCAGATGCTTGTGGAGATGCTTTGTGAGGATAGA GGTATCTTCTTGGAGATAGCTGACTTTATTAAAGGACTCGGATTAACCATCTTAAGGGGC GTCATGGAAGCACGCAAAAATAAAATCTGGGCACGGTTCACTGTTGAGGCCAACAGGGAT GTGACTAGAATGGAAATCTTCCTTTCCCTAATGCGCTTGCTGGAACCGAGTTATGATGGC GGTGGAGCAGGAGAGAATCCTAATAACAACATAAAAATGCCCCTTGGAATTGTGCAGTAT CCCGTTATCCCTGTGTCAGGTCATCTTAGGTGA

Peptide Sequence

PEP ID	Zm00001d023479_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:10:6924519:6930183:1 gene:Zm00001d023479 transcript:Zm00001d023479_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative HLH DNA-binding domain superfamily protein
Sequence	MAVGDALRRLCEEVGWSYAVFWKAIGAADPVHLVWEDGCCGHVSCSAGSEAPEAGCELGT SVCTLVRKVMTSQIHVVGEGTIGRAAFTGNHQWIVHDPANDHNLRPEVSAEMNHQFAAGI QTIAIIPVLPRGVLQLGATSVVMENTNLVLQYKNLCSQLNNRSSMASSSSVKNDLNQKIQ SRPLNGLTSIHPADTRSKFFSGPPLTYQQCYGPDGRTVSSSTLANMGSNASMLMVAQRNG QVGKEHIVYAPDMRFRPQNPYCDRRVGSNTQNSVVSSGFISSISASMERHPLMTNNRQLE QGNTGEPSDSRSVLLKSLAYHNPLVHENTNMTLLHGRGQVPGFVNGHGGFDFLPEGTRVV KSNLYGSTTNQILDQICSSTSGMKGHGPTISYKIPQPTQFVGKTESSKRETCQASVALLS DSDIQVSSVLKTAISQENQTSRSDLIGSKKANEVHDPTDAIVQAVKNMDRRRLPDISNER SPPFLMDPAAESDLFDMFGSEFHHLCHNVDNDLTWKAAKPENSNRDVPEFSDHLGSSPAF NSVDDEFPYSGIFSLTDTDQLLDAVVSNANPGGKQISGDSASCKTSVTDIPSTSYCRLKE PKQSESSAPPLLIKNELAVSNFVKHPSFPEKAADGCLSQNNAIQKSQIRLWIESGQNLKC ESASASNSKGVDTSSKASRKRSRPGENPKPRPKDRQLIQDRIKELRELVPNGAKCSIDAL LEKTIKHMVFLQSVTKHADNLKDSNESKILGGENGPLKDYFEGGATWAFDVGSQSMTCPI IVEDLDRPRQMLVEMLCEDRGIFLEIADFIKGLGLTILRGVMEARKNKIWARFTVEANRD VTRMEIFLSLMRLLEPSYDGGGAGENPNNNIKMPLGIVQYPVIPVSGHLR

Transcript Sequence

Transcript ID	Zm00001d023479_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:6924519:6930183:1 gene:Zm00001d023479 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative HLH DNA-binding domain superfamily protein
Sequence	AAAGCCAGCAAAGCCAGAGCGAGCGAGGGAGCAAGGAGGAAGACGCACCAGGACATTGAC GAGCCGCGGTCCGCAGCAGCAGCTCCCAGCTTCATCCCCCGACCCGGAGCCCCAGCACTG GTGCAGCAGGCTCGCTCGCCGCCGCCGCCGCCGCGTGAAGTGAGGCGCGCCCCCCCGCGG ACGCTGACGCTGGGACCCGCGCCTGCTGGGAGTGGGCCCGCCCCATTGATGGGCGCCGGC AGGCGCCGGCGGCGAGGGAAAGCGTGAGGACGAGGAGGGCCGGCGGGCTCCGCACGAAGC AGGCCGGGCGAGCCTGCCGCCGCGCCGCCTAGGGAGGGCGCCGCCCGTCTTTGCTTGTTT GCTCGCACCGTCGCACGTCCTGTTCCAGTACCAGGCCAGAGAGAAGGGGGGCGGGACTGC AGGCGGCGGGCCGCGGAGGAGCTAGGGTTCTCTCTGTTCTCACTCTCCCTGCGTCGCCGG GATGGCGGTTGGGGACGCGCTGCGCCGGCTCTGCGAGGAGGTCGGCTGGTCCTACGCCGT CTTCTGGAAGGCCATCGGCGCCGCCGACCCTGTGCATTTGGTGTGGGAGGACGGTTGCTG CGGCCACGTGTCATGCTCCGCCGGGTCTGAGGCTCCTGAAGCTGGGTGCGAGCTGGGCAC CAGTGTGTGCACGCTTGTTAGGAAGGTCATGACCTCGCAAATTCATGTTGTTGGTGAGGG TACCATTGGCCGTGCTGCTTTCACCGGAAATCATCAATGGATTGTCCATGATCCTGCCAA TGATCACAATCTCAGACCCGAGGTTTCTGCTGAGATGAATCATCAGTTTGCAGCTGGCAT TCAGACTATTGCAATTATTCCCGTGTTACCACGAGGTGTACTGCAGCTAGGTGCGACAAG TGTGGTAATGGAAAATACCAACCTTGTGCTCCAGTATAAGAACCTGTGTTCTCAGCTAAA CAATCGGTCGAGTATGGCTTCATCGTCATCTGTTAAAAATGATTTGAACCAGAAAATTCA GTCACGCCCTTTGAATGGCCTCACGAGTATACACCCTGCAGATACACGCTCAAAGTTTTT TAGTGGACCCCCATTGACATATCAACAATGTTATGGTCCTGATGGCAGAACTGTGTCTAG TAGTACATTGGCAAACATGGGCAGTAATGCTTCAATGCTTATGGTTGCACAAAGAAATGG CCAAGTGGGTAAAGAACACATTGTATATGCTCCTGACATGAGGTTCAGACCACAAAACCC TTACTGTGACAGGAGAGTTGGGAGTAACACCCAAAATAGTGTTGTGAGCTCTGGTTTTAT CTCGTCTATCTCAGCATCAATGGAAAGGCATCCATTAATGACCAACAATCGACAGTTAGA ACAAGGAAACACTGGAGAACCATCAGATTCCAGAAGTGTTCTCTTGAAATCTCTCGCATA CCATAACCCTTTAGTGCATGAAAACACAAACATGACTTTGTTGCATGGAAGAGGCCAGGT GCCAGGCTTTGTTAATGGTCATGGGGGTTTTGATTTTCTCCCAGAAGGTACTAGAGTAGT CAAGAGTAACCTGTATGGCAGCACAACAAATCAAATTTTAGATCAAATATGCAGTTCTAC TTCTGGGATGAAAGGGCACGGACCAACTATTTCATATAAAATCCCCCAACCTACCCAATT TGTTGGAAAAACGGAGAGTTCCAAGAGAGAGACATGTCAAGCTTCTGTTGCTCTGTTGTC TGACTCTGATATTCAGGTTTCTAGTGTCTTGAAAACAGCCATTTCCCAAGAGAATCAGAC GAGTAGATCTGATCTTATTGGCTCAAAAAAGGCTAATGAAGTGCATGATCCTACTGATGC AATTGTTCAAGCTGTCAAGAATATGGATCGCCGCAGACTCCCAGACATATCTAACGAGAG ATCACCCCCATTCCTTATGGATCCTGCTGCAGAAAGTGATTTGTTTGACATGTTTGGTTC TGAATTTCATCATTTGTGTCACAATGTGGATAATGATCTTACCTGGAAAGCTGCAAAACC TGAGAATTCAAATAGAGATGTACCTGAATTCTCTGATCATCTTGGTTCCTCTCCAGCCTT CAATTCAGTGGATGACGAGTTCCCTTATTCTGGGATCTTCTCACTAACTGATACCGACCA ACTGTTGGATGCGGTTGTCTCTAATGCCAATCCTGGTGGCAAGCAGATATCTGGTGACAG CGCTTCTTGCAAGACTTCAGTGACAGATATTCCTAGCACTTCGTATTGTCGCTTAAAAGA GCCAAAGCAGTCTGAATCATCTGCTCCTCCTTTGCTAATCAAGAATGAGTTAGCTGTTTC AAATTTTGTTAAACATCCATCTTTCCCAGAAAAGGCAGCGGATGGCTGTCTTTCTCAAAA TAATGCAATACAGAAATCTCAGATACGCCTCTGGATTGAGAGCGGACAGAACTTGAAATG TGAAAGTGCCTCAGCCTCAAACAGCAAGGGCGTTGATACATCAAGCAAGGCTAGTCGAAA GAGGTCTCGACCAGGAGAGAATCCTAAGCCACGACCAAAGGACCGCCAGCTTATTCAGGA TCGTATAAAGGAGCTCCGGGAACTCGTACCTAATGGGGCAAAGTGTAGCATTGATGCCTT GTTGGAGAAGACCATTAAGCACATGGTTTTCTTGCAAAGTGTGACAAAGCATGCAGATAA CCTCAAGGACTCAAATGAATCTAAGATTCTTGGTGGTGAGAATGGTCCATTAAAAGACTA CTTCGAAGGTGGTGCGACTTGGGCCTTTGATGTTGGTAGTCAATCTATGACGTGTCCAAT CATTGTTGAGGATCTTGATCGGCCTCGTCAGATGCTTGTGGAGATGCTTTGTGAGGATAG AGGTATCTTCTTGGAGATAGCTGACTTTATTAAAGGACTCGGATTAACCATCTTAAGGGG CGTCATGGAAGCACGCAAAAATAAAATCTGGGCACGGTTCACTGTTGAGGCCAACAGGGA TGTGACTAGAATGGAAATCTTCCTTTCCCTAATGCGCTTGCTGGAACCGAGTTATGATGG CGGTGGAGCAGGAGAGAATCCTAATAACAACATAAAAATGCCCCTTGGAATTGTGCAGTA TCCCGTTATCCCTGTGTCAGGTCATCTTAGGTGAGCCAGCTGCCCAGCCAGCACAAAGAT CACAGGACAGGAGGCATCTTTGAAATGCTAAGAGCGGGAGGTCGACCCACTTCTGCCATG ACTAGCATTATCAACCCAGGACGAGCGGGAATCTCGTGGCATGCAGTGCATCGTCCCTGC AGTGTGCATTCGGAAAGCCTAACAGTAGAGGGGAATGGAGACATGGATAGTTGGTTCGGC GGGTGATCATTAGACGATCGATGTTTTGACTGTATAATCTTAACTGTTGCTGATGCTTTT GCCTTTTGTTCTTCTGCATATTAGTGAATTTTGTTATGTTCTTCTGCTGAATGGAAATTC TGAGTTGAATTGTAGACCTTGTTCAGTTGTTTCTGGTACTAGCTCGAAGTCGGAGCTCTC TTTTTCTTACCGTTCCTGTGTGATTACTAATGAGAAACTAGTTTTACTGTTTACAG