Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d023431_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:10:5419971:5427473:-1 gene:Zm00001d023431 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal recognition particle 54 kDa protein chloroplastic
Sequence	ATGGAGGCCACGACAGCGCTCGCGCTCTCCTCCTCGTCCCTTGCCACCGCACGTCGCTCG CCGGAGAAGGCGACCGCTGCGTCCCTCAGCCTCCGCCGTTTCTCAGCTACCACCTCGCTC CACCTCCGCGCTGCCCGGAGCCCAGCGCTTCGCTCGCACCAGTCACCCTTCCAGGGATGG AGGCGGCGGGGGAGGGCGGGCGGGCTGGTGGTTCGGGCGGAGATGTTTGGCCAGCTCACC ACCGGCCTCGAGTCCGCCTGGAACAAGCTGAGGGGAGTCGATGTATTGACAAAGGAAAAC ATAGCTGAACCAATGCGGGATATCAGAAGAGCACTTTTGGAGGCCGATGTAAGTTTGCCA GTAGTAAGAAGATTTATTGAGTCTGTAAGTGAAAAGGCTGTAGGCACCGATGTGATCCGA GGTGTCCGACCTGACCAGCAGTTGGTGAAGGTTGTGAGTGATGAACTGGTACAACTGATG GGCGGGGAGGTATCAGATTTGGTGTTTGCAAAATCTGGGCCAACTATTATATTATTGGCA GGTCTGCAAGGTGTTGGAAAAACTACTGTTTGTGCGAAGCTTGCCTTCTATCTCAAAAAA CTGGTATTTTCCTTAAGCCTATTACAGGGCAAGAGCTGTATGCTAGTTGCTGCAGATGTT TACAGGCCTGCTGCTATTGATCAACTCACTATTCTGGGTAAAAAGGTTGGTGTACCAGTT TACTCAGAAGGAACTGAAGCAAAACCTTCACAAATAGCCAAAAACGGTTTGAAGGAGGCA AAAGTCAATAAGGCTGATGTAATTATAGTGGACACGGCTGGAAGACTGCAGGTAGATAAA GCAATGATGAATGAGTTGAAAGAAGTAAAAAAAGCAGTGAATCCTACAGAAGTTCTTCTT GTGGTTGATGCCATGACTGGCCAAGAAGCTGCAGGGTTGGTCAGCTCCTTCAATGATGAG ATTGGTATAACTGGTGCTATACTGACAAAACTGGATGGTGACTCAAGAGGTGGAGCAGCA CTGAGCGTTAAAGAGGTGTCTGGAAAGCCAATTAAATTTGTAGGACAAGGAGAGCGTATT GAAGATCTTGAGCCTTTCTACCCAGATCGTATGGCACAACGTATCTTGGGAATGGGAGAT GTACTTTCATTTGTTGAAAAAGCACAAGAAGTGATGCGCCAAGAAGATGCTGATGAATTA CAGAAGAAGATCTTGAGTGCAAAATTCAACTTTAATGACTTCCTGAAGCAAACACAAATG ATTGCAAAAATGGGTTCATTCAGTCGTTTGATTGGCATGATTCCGGGCATGAACAAGGTT ACTCCTGCACAAATCCGTGAAGCTGAGAAGAATCTCAAGTTTATGGAATCAATGATCAAT GTGATGACTCTTGAGGAAAGGGAACGACCAGAGCTTCTTGCTGAATCACGCGAGAGAAGG AAACGAGTGGCCAAGGACTCTGGAAAGACTGAACAGCAGGTGAGCCAATTGGTCGCGCAA CTCTTCCAAATGCGTGCAAAAATGCAGAAAATGATGGGCGCTATGCAAGGAAAAGAGTCA CCAGACATGGACGAGCTCATGGGATCGATGAAAGCTGAGGAGCAGTCTGCTGCCGGTACT GGACGGCGTAGAAGGAAGTATGGCAACCTGAGGCAGCGGCAACTGGATGCCATGCGTGGT TTCCGCAGACGGTGA

Peptide Sequence

PEP ID	Zm00001d023431_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:10:5419971:5427473:-1 gene:Zm00001d023431 transcript:Zm00001d023431_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal recognition particle 54 kDa protein chloroplastic
Sequence	MEATTALALSSSSLATARRSPEKATAASLSLRRFSATTSLHLRAARSPALRSHQSPFQGW RRRGRAGGLVVRAEMFGQLTTGLESAWNKLRGVDVLTKENIAEPMRDIRRALLEADVSLP VVRRFIESVSEKAVGTDVIRGVRPDQQLVKVVSDELVQLMGGEVSDLVFAKSGPTIILLA GLQGVGKTTVCAKLAFYLKKLVFSLSLLQGKSCMLVAADVYRPAAIDQLTILGKKVGVPV YSEGTEAKPSQIAKNGLKEAKVNKADVIIVDTAGRLQVDKAMMNELKEVKKAVNPTEVLL VVDAMTGQEAAGLVSSFNDEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKFVGQGERI EDLEPFYPDRMAQRILGMGDVLSFVEKAQEVMRQEDADELQKKILSAKFNFNDFLKQTQM IAKMGSFSRLIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTLEERERPELLAESRERR KRVAKDSGKTEQQVSQLVAQLFQMRAKMQKMMGAMQGKESPDMDELMGSMKAEEQSAAGT GRRRRKYGNLRQRQLDAMRGFRRR

Transcript Sequence

Transcript ID	Zm00001d023431_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:5419971:5427473:-1 gene:Zm00001d023431 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal recognition particle 54 kDa protein chloroplastic
Sequence	CCCGTACCTCGTCTCCTGCCCAAACCCAATGGAGGCCACGACAGCGCTCGCGCTCTCCTC CTCGTCCCTTGCCACCGCACGTCGCTCGCCGGAGAAGGCGACCGCTGCGTCCCTCAGCCT CCGCCGTTTCTCAGCTACCACCTCGCTCCACCTCCGCGCTGCCCGGAGCCCAGCGCTTCG CTCGCACCAGTCACCCTTCCAGGGATGGAGGCGGCGGGGGAGGGCGGGCGGGCTGGTGGT TCGGGCGGAGATGTTTGGCCAGCTCACCACCGGCCTCGAGTCCGCCTGGAACAAGCTGAG GGGAGTCGATGTATTGACAAAGGAAAACATAGCTGAACCAATGCGGGATATCAGAAGAGC ACTTTTGGAGGCCGATGTAAGTTTGCCAGTAGTAAGAAGATTTATTGAGTCTGTAAGTGA AAAGGCTGTAGGCACCGATGTGATCCGAGGTGTCCGACCTGACCAGCAGTTGGTGAAGGT TGTGAGTGATGAACTGGTACAACTGATGGGCGGGGAGGTATCAGATTTGGTGTTTGCAAA ATCTGGGCCAACTATTATATTATTGGCAGGTCTGCAAGGTGTTGGAAAAACTACTGTTTG TGCGAAGCTTGCCTTCTATCTCAAAAAACTGGTATTTTCCTTAAGCCTATTACAGGGCAA GAGCTGTATGCTAGTTGCTGCAGATGTTTACAGGCCTGCTGCTATTGATCAACTCACTAT TCTGGGTAAAAAGGTTGGTGTACCAGTTTACTCAGAAGGAACTGAAGCAAAACCTTCACA AATAGCCAAAAACGGTTTGAAGGAGGCAAAAGTCAATAAGGCTGATGTAATTATAGTGGA CACGGCTGGAAGACTGCAGGTAGATAAAGCAATGATGAATGAGTTGAAAGAAGTAAAAAA AGCAGTGAATCCTACAGAAGTTCTTCTTGTGGTTGATGCCATGACTGGCCAAGAAGCTGC AGGGTTGGTCAGCTCCTTCAATGATGAGATTGGTATAACTGGTGCTATACTGACAAAACT GGATGGTGACTCAAGAGGTGGAGCAGCACTGAGCGTTAAAGAGGTGTCTGGAAAGCCAAT TAAATTTGTAGGACAAGGAGAGCGTATTGAAGATCTTGAGCCTTTCTACCCAGATCGTAT GGCACAACGTATCTTGGGAATGGGAGATGTACTTTCATTTGTTGAAAAAGCACAAGAAGT GATGCGCCAAGAAGATGCTGATGAATTACAGAAGAAGATCTTGAGTGCAAAATTCAACTT TAATGACTTCCTGAAGCAAACACAAATGATTGCAAAAATGGGTTCATTCAGTCGTTTGAT TGGCATGATTCCGGGCATGAACAAGGTTACTCCTGCACAAATCCGTGAAGCTGAGAAGAA TCTCAAGTTTATGGAATCAATGATCAATGTGATGACTCTTGAGGAAAGGGAACGACCAGA GCTTCTTGCTGAATCACGCGAGAGAAGGAAACGAGTGGCCAAGGACTCTGGAAAGACTGA ACAGCAGGTGAGCCAATTGGTCGCGCAACTCTTCCAAATGCGTGCAAAAATGCAGAAAAT GATGGGCGCTATGCAAGGAAAAGAGTCACCAGACATGGACGAGCTCATGGGATCGATGAA AGCTGAGGAGCAGTCTGCTGCCGGTACTGGACGGCGTAGAAGGAAGTATGGCAACCTGAG GCAGCGGCAACTGGATGCCATGCGTGGTTTCCGCAGACGGTGAGATGTTCATTGCCGACT AGCACTGGCGGTGCCTGCACGAACGATGGCATTTAGGGACTTGGGCTCGGATATAGAAGT GGAAGAAGATGAAGTGCTTTTGGGTGCAATGGCAATCATCTGGGTACATTGAGTTGAGTT TGCATATTCATGTGCAGTGTCCTATTTTGTCATATTAGCTGTATTATTATCTTTCTTCGG AGCAAGAACTCGCAAAATTGCGTCATCTGAACCCTGTCCACCGTCGTGGAAACGAGTGCA CTTCGGCCATGCTAGCAAATACAAATTCGGATCTGGATCATACATGTGGCACATAACTCT GTGGAAGAATTTTGCGAGAAAAAAAAATCACCAATAAGCATAGCTAACTTTGCTTTT