Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d023373_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:10:4237987:4263190:-1 gene:Zm00001d023373 gene_biotype:protein_coding transcript_biotype:protein_coding description:U3 small nucleolar RNA-associated protein 25
Sequence	ATGGGGAAGCGCAAGCCCATGCCTTCCGCCGCCGCTGCTCGAGGACCGAAGAACCGGCCA AAGAGGCCAAAGTCTGTGAAGCAGGGAGCTGAGTTACGGGAGCAGAATCTCCAACTGCCG GAACACGATTACGAAAATATAGATACTGAATCTGGAGCAGCAGAGACCGTTCACCGTGAT AAAAAAGCAAATGGGATCTTTCAAGACACATCACAGAGTGATGAAGAAGAAATAGAAGAC GAGTATGATGCTCCTAGTAATGACACGCCAGGTGATGCGACAAACAATGGAAATGGTTGT TTTGATGAAACAGAGATTTCATGTTCATTTCATCGCCATGTAAGCCACGTCATAACAAAT GAAGAAGTCAAGATGTTGATGAAGAAGAACTATAAATTTAAATGGGAAATGCCTGCTGTG GGCATTCCAAGGTCCAAATGGGTTGGAACAGGTGAAAAAGTGCAGGAAGCATGTGATGAT CATCTTCATGATGTCAAAGGAAAGTTGAGAGACCATTGGCAACATACACTGTCCGATCAT TTAAATTCTCGAATGAGCTTTTACTCTCTTTGTAACAGTTATCGTGACATAATGCATTGC AATAAGAAGCCATTTTATCTGAAAAGTAACGGTCCTGATTCTAGTACCATGGACGCATAT CTTATGCATGCTTTGAATCATGTGCATAGGACGCGAGATGTTGTAATTAGAAATGACGCA AAGCTTAGGAATGACACTGACAGAGATATTACGGATGATAAGACATACCTTGATCAGGGT TTTACACGCCCGAAGGTTCTTTTTTTGTTGCCTCTCAAAAGTTTTGCACGGCGCATTGTG AAGAGATTGATCCAGCTTTCCCCATTGCCACAAAAGGATAGTGCCATGGGACAATTTAAA AAGGAGTTTGGTGAATCAGATGACGAGGGGATACCTGAACATAGCACAAAACCTGCAGAC TTTGACCTCCTTTTTGCCGGAGACATTGATGACCACTTTGTTTTTGGCGTAAAGTTAACA AAGAAATCTATTAAGCTGTACAGTAACTTCTATTCTTCTGATATAATAGTTGCATCTCCT TTAGCGCTGAAACGCATAGTGGTTGTTGATCATGCGGATGTGATGTCTATGCAGAACTGG GACCATCTGGAGGCTGTGTTTGAACAACTTAATCAGTTGCCATCAAAAGAACATGGAACC AATGTGATGCGAATTAGGCCGTGGTACTTGGATCAGCATGCACAGTACTATCGGCAGACA ATACTGTTAAGCTCATACCTTACACCAGAGATTAATGCTTTATTTAACGGATTATGCTTA AATTATGAAGGAAAGATTAAAATGGTGACCGAGTATGCAGGAGTTCTTCCCAAAATACAA CTTGAAGTGCGGCAGGTGTATGAAAGATTTGATGCATCTTCTATTGCTGAAGCTGACGGT GCTCGTTTTGATTATTTCTGCAACAAGGTATATCCAAAGATCCAGGACTTGGATGAGGGT GGGCTGCTGCTATTCGTCAGTTCGTATTTTGAATACATTCGAATAAGCAATTTCTTAAAA TCCAAGGAAGCGTCCTTTTGTCGAATCGGAGAGTGA

Peptide Sequence

PEP ID	Zm00001d023373_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:10:4237987:4263190:-1 gene:Zm00001d023373 transcript:Zm00001d023373_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:U3 small nucleolar RNA-associated protein 25
Sequence	MGKRKPMPSAAAARGPKNRPKRPKSVKQGAELREQNLQLPEHDYENIDTESGAAETVHRD KKANGIFQDTSQSDEEEIEDEYDAPSNDTPGDATNNGNGCFDETEISCSFHRHVSHVITN EEVKMLMKKNYKFKWEMPAVGIPRSKWVGTGEKVQEACDDHLHDVKGKLRDHWQHTLSDH LNSRMSFYSLCNSYRDIMHCNKKPFYLKSNGPDSSTMDAYLMHALNHVHRTRDVVIRNDA KLRNDTDRDITDDKTYLDQGFTRPKVLFLLPLKSFARRIVKRLIQLSPLPQKDSAMGQFK KEFGESDDEGIPEHSTKPADFDLLFAGDIDDHFVFGVKLTKKSIKLYSNFYSSDIIVASP LALKRIVVVDHADVMSMQNWDHLEAVFEQLNQLPSKEHGTNVMRIRPWYLDQHAQYYRQT ILLSSYLTPEINALFNGLCLNYEGKIKMVTEYAGVLPKIQLEVRQVYERFDASSIAEADG ARFDYFCNKVYPKIQDLDEGGLLLFVSSYFEYIRISNFLKSKEASFCRIGE

Transcript Sequence

Transcript ID	Zm00001d023373_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:4237987:4263190:-1 gene:Zm00001d023373 gene_biotype:protein_coding transcript_biotype:protein_coding description:U3 small nucleolar RNA-associated protein 25
Sequence	ACGCAAACGGCAAATCAGCCGCCGCCCCCTCCCGACCTGCACAGGCTGCACGCAGCTCCC ATCTCCGGCTCCGGTGACCGGCGCTCCCCCTCCTCGCCCAGGTCCAGAGCCGCCCCCTCT CGACCTGCAAGCTGCACGCAGCGGGGCCAGGGCCAGAGCCGCCACCCCCGGTGACCGGCG CCCCGCGCCCCCAGTCCCCCTCCCCCACGGCTGACGGCCCCACTGCCACCTGCCAGGCGC CCCAGCCGCCTCCTCTCCCGGCTCACTCACCGGTAACCGGCGTCCGGCCGGGACCTGGAC GTGCCGCGTGCGGCCCAACGCCCCAAGCCCCCAACCCAGGAATCAGCGACCAGCCGACCA CAGCAGCCAGCAGAGAAGGGAATACGAATAACCAAAGAAGCGAAGAACAGATAGAGAAAC TGATAAAGAGAAAGGTAGATAGATGGGGAAGCGCAAGCCCATGCCTTCCGCCGCCGCTGC TCGAGGACCGAAGAACCGGCCAAAGAGGCCAAAGTCTGTGAAGCAGGGAGCTGAGTTACG GGAGCAGAATCTCCAACTGCCGGAACACGATTACGAAAATATAGATACTGAATCTGGAGC AGCAGAGACCGTTCACCGTGATAAAAAAGCAAATGGGATCTTTCAAGACACATCACAGAG TGATGAAGAAGAAATAGAAGACGAGTATGATGCTCCTAGTAATGACACGCCAGGTGATGC GACAAACAATGGAAATGGTTGTTTTGATGAAACAGAGATTTCATGTTCATTTCATCGCCA TGTAAGCCACGTCATAACAAATGAAGAAGTCAAGATGTTGATGAAGAAGAACTATAAATT TAAATGGGAAATGCCTGCTGTGGGCATTCCAAGGTCCAAATGGGTTGGAACAGGTGAAAA AGTGCAGGAAGCATGTGATGATCATCTTCATGATGTCAAAGGAAAGTTGAGAGACCATTG GCAACATACACTGTCCGATCATTTAAATTCTCGAATGAGCTTTTACTCTCTTTGTAACAG TTATCGTGACATAATGCATTGCAATAAGAAGCCATTTTATCTGAAAAGTAACGGTCCTGA TTCTAGTACCATGGACGCATATCTTATGCATGCTTTGAATCATGTGCATAGGACGCGAGA TGTTGTAATTAGAAATGACGCAAAGCTTAGGAATGACACTGACAGAGATATTACGGATGA TAAGACATACCTTGATCAGGGTTTTACACGCCCGAAGGTTCTTTTTTTGTTGCCTCTCAA AAGTTTTGCACGGCGCATTGTGAAGAGATTGATCCAGCTTTCCCCATTGCCACAAAAGGA TAGTGCCATGGGACAATTTAAAAAGGAGTTTGGTGAATCAGATGACGAGGGGATACCTGA ACATAGCACAAAACCTGCAGACTTTGACCTCCTTTTTGCCGGAGACATTGATGACCACTT TGTTTTTGGCGTAAAGTTAACAAAGAAATCTATTAAGCTGTACAGTAACTTCTATTCTTC TGATATAATAGTTGCATCTCCTTTAGCGCTGAAACGCATAGTGGTTGTTGATCATGCGGA TGTGATGTCTATGCAGAACTGGGACCATCTGGAGGCTGTGTTTGAACAACTTAATCAGTT GCCATCAAAAGAACATGGAACCAATGTGATGCGAATTAGGCCGTGGTACTTGGATCAGCA TGCACAGTACTATCGGCAGACAATACTGTTAAGCTCATACCTTACACCAGAGATTAATGC TTTATTTAACGGATTATGCTTAAATTATGAAGGAAAGATTAAAATGGTGACCGAGTATGC AGGAGTTCTTCCCAAAATACAACTTGAAGTGCGGCAGGTGTATGAAAGATTTGATGCATC TTCTATTGCTGAAGCTGACGGTGCTCGTTTTGATTATTTCTGCAACAAGGTATATCCAAA GATCCAGGACTTGGATGAGGGTGGGCTGCTGCTATTCGTCAGTTCGTATTTTGAATACAT TCGAATAAGCAATTTCTTAAAATCCAAGGAAGCGTCCTTTTGTCGAATCGGAGAGTGA