Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d023331_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:3594888:3597482:1 gene:Zm00001d023331 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCCCTGCCGCCCCACGCCTGCTCAGCCGGAGCGGGGTTCGTCGCCACCGCCACCTTC TCCCACCTCTACCAGCTATGCGCCAGCGCTGGGCGCTCGGCCCTCACCACGGGCCAGGCT GCGCACGCCCGTATGCTTGTGTCCGGGTTCATGCCCACCACGTTTGTCTCCAACTGCCTC CTCCAGATGTATGCCCGCTGCGGGGGCACCGCCCACGCGCACGGGGTGTTCGACACGATG CCCCACCGGGACACGGTCTCGTGGAACACCATGCTCACGGCGTACGTGCACGCGGGCGAC ACCGACACGGCCGCGTCCCTCTTCGGCACGATGCCGGACCCAGACGTCGTGTCCTGGAAC ACGCTGATCTCGGGCTACTGCCAGCACGGCATGTTCCGGAACTCGGTGGGCCTGTCTATG GAGATGTCTCGCCGTGGTGTTGCCCTCGACAGGACGACGCTCGCTGTCCTGCTCAAGTCA TGCGGTGGCTTGGACGACCTGGCGCTTGGTGTTCAGATCCATGCGCTGGCGGTGAAGACG GGCCTGGAGACGGATGTCCGGGCCGGTAGCGCTCTCGTCGACATGTATGGCAAGTGCAGG AGCTTGGATGACGCGCTGCGCTTCTTTCATGGAATGGGTGAGAGGAATTCGGTCTCGTGG GGTGCGGCGATCGCTGGGTGTGTTCAGAACGAGCAGTACACACGGGGGATGGAGCTGTTC GTGCAGATGCAGAGGTTGGGGCTTGGAGTCAGCCAGCCGGCTTATGCCAGTGCCTTTAGA TCCTGTGCAGCAATGCCATGTCTGAGCACCGCTAGGCAGTTGCATGCGCATGCCATCAAG AATGTTTTTAGCTCTGACCGTGTTGTTGGGACAGCAATTGTGGACGTGTATGCGAAGGCT GGTAACTTGGTTGATGCAAGAAGGGCATTCATTGGTTTGCCTCACCATAATGTGGAGACA TGCAATGCCATGATGGTTGGGCTTGTGCGCACAGGGCTAGGAGCTGAGGCCATGCAACTG TTTCAGTTCATGACCAGGTCTGGTGTTGGGTTTGATGTAATTAGCTTATCAGGTGTTTTC AGTGCTTGTGCTGAGGTTAAGGGGTACTTTCAAGGGTTGCAAGTACACTGCTTAGCAGTT AAATCAGGTTTTGATGTGGATGTTTGTGTCAGAAATGCAATTCTGGATCTATATGGGAAG TGCAAAGCATTAGTAGAAGCATACCTTGTATTCCAGGAGATGGAGCAAAGAGATTCGGTC TCTTGGAACGCTATTATTGCAGCTCTCGAGCAAAATGAGTGTTATGAGGATACTATAGCT CATCTAAATGAAATGCTGCGCTCTGGTATGGAACCTGATGATTTCACGTACGGCAGTGTT CTTAAGGCTTGTGCAGGTCTACAATCTTTGGAATATGGGTTGGTGGTTCATGGCAAAGCT ATCAAGTCTGGACTTGGTTTAGATGCTTTTGTTTCAAGCACTGTTGTTGACATGTACTGC AAATGCGGCGCGATAACAGAGGCTCAGAAACTCCATGATAGAATTGGGGGGCAAGAACTT GTTTCGTGGAACTCCATCATATCAGGTTTTTCACTCACCAAACAGAGTGAAGAGGCACAG AGATTCTTCTCAGAGATGCTAGACATGGGTGTAAAACCTGACCATTTTACTTACGCCACC GTTCTTGACACTTGTGCTAATCTGGCTACCATTGAGTTGGGGAAACAGATCCATGGTCAG ATTATCAAACAGGAAATGCTTGGAGACGAATATATCTCCAGCACTCTTGTAGACATGTAT GCCAAGTGTGGGAACATGCCAGACTCGCTGCTAATGTTCGAGAAGGCGCGGAAACTGGAT TTCGTATCATGGAACGCCATGATATGTGGCTACGCGCTCCACGGCCAGGGACTTGAAGCC CTGGAGATGTTTGAGAGGATGCAGAGAGCAAATGTGGTGCCGAACCACGCGACTTTCGTC GCAGTTCTGCGGGCATGCAGCCATGTCGGCCTGCTGGACGATGGATGCCAGTATTTCCAT CTGATGACAAGCCGCTACAAACTGGTTCCTCAACTGGAACACTTTGCTTGCATGGTGGAT ATACTGGGACGCTCAAAGGGCCCACAGGAAGCCCTAGAATTTATCAGAAGCATGCCTATT GAGGCAGACGCTGTCGTATGGAAGACTCTGCTAAGCATTTGCAAGATCCGTCAAGACGTC GAAGTGGCCGAAACTGCCGCTAGCAATGTCCTACGGCTAGACCCAGACGACGCGTCGGTT TACATTCTTCTCTCTAACGTATACGCTGGATCCGGGAAATGGGTCGATGTTTCAAGGACC AGAAGGCTAATGAGGCAGGGACGGCTGAGAAAGGAACCTGGTTGTAGCTGGATCGAGGTG CAATCCGAGATGCACGGTTTCCTTGTCGGCGATAAGGTTCATCCCAGGTCGAAGGAGGTG TATGAGATGCTGAATAGTCTAATCGGTGAGATGAAACTCTCTGGATATGAACCTGCATCA GCATTGTTTGCTGAGGTTGAAGAAGAGGAGAGTACATCCGAGCAAGATGACTTGGTTAGA GTCGTTGGTGGTTAA

Peptide Sequence

PEP ID	Zm00001d023331_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:3594888:3597482:1 gene:Zm00001d023331 transcript:Zm00001d023331_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MPLPPHACSAGAGFVATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCL LQMYARCGGTAHAHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWN TLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKT GLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELF VQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKA GNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVF SACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSV SWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKA IKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQ RFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMY AKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFV AVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPI EADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRT RRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLSGYEPAS ALFAEVEEEESTSEQDDLVRVVGG

Transcript Sequence

Transcript ID	Zm00001d023331_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:3594888:3597482:1 gene:Zm00001d023331 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCCCTGCCGCCCCACGCCTGCTCAGCCGGAGCGGGGTTCGTCGCCACCGCCACCTTC TCCCACCTCTACCAGCTATGCGCCAGCGCTGGGCGCTCGGCCCTCACCACGGGCCAGGCT GCGCACGCCCGTATGCTTGTGTCCGGGTTCATGCCCACCACGTTTGTCTCCAACTGCCTC CTCCAGATGTATGCCCGCTGCGGGGGCACCGCCCACGCGCACGGGGTGTTCGACACGATG CCCCACCGGGACACGGTCTCGTGGAACACCATGCTCACGGCGTACGTGCACGCGGGCGAC ACCGACACGGCCGCGTCCCTCTTCGGCACGATGCCGGACCCAGACGTCGTGTCCTGGAAC ACGCTGATCTCGGGCTACTGCCAGCACGGCATGTTCCGGAACTCGGTGGGCCTGTCTATG GAGATGTCTCGCCGTGGTGTTGCCCTCGACAGGACGACGCTCGCTGTCCTGCTCAAGTCA TGCGGTGGCTTGGACGACCTGGCGCTTGGTGTTCAGATCCATGCGCTGGCGGTGAAGACG GGCCTGGAGACGGATGTCCGGGCCGGTAGCGCTCTCGTCGACATGTATGGCAAGTGCAGG AGCTTGGATGACGCGCTGCGCTTCTTTCATGGAATGGGTGAGAGGAATTCGGTCTCGTGG GGTGCGGCGATCGCTGGGTGTGTTCAGAACGAGCAGTACACACGGGGGATGGAGCTGTTC GTGCAGATGCAGAGGTTGGGGCTTGGAGTCAGCCAGCCGGCTTATGCCAGTGCCTTTAGA TCCTGTGCAGCAATGCCATGTCTGAGCACCGCTAGGCAGTTGCATGCGCATGCCATCAAG AATGTTTTTAGCTCTGACCGTGTTGTTGGGACAGCAATTGTGGACGTGTATGCGAAGGCT GGTAACTTGGTTGATGCAAGAAGGGCATTCATTGGTTTGCCTCACCATAATGTGGAGACA TGCAATGCCATGATGGTTGGGCTTGTGCGCACAGGGCTAGGAGCTGAGGCCATGCAACTG TTTCAGTTCATGACCAGGTCTGGTGTTGGGTTTGATGTAATTAGCTTATCAGGTGTTTTC AGTGCTTGTGCTGAGGTTAAGGGGTACTTTCAAGGGTTGCAAGTACACTGCTTAGCAGTT AAATCAGGTTTTGATGTGGATGTTTGTGTCAGAAATGCAATTCTGGATCTATATGGGAAG TGCAAAGCATTAGTAGAAGCATACCTTGTATTCCAGGAGATGGAGCAAAGAGATTCGGTC TCTTGGAACGCTATTATTGCAGCTCTCGAGCAAAATGAGTGTTATGAGGATACTATAGCT CATCTAAATGAAATGCTGCGCTCTGGTATGGAACCTGATGATTTCACGTACGGCAGTGTT CTTAAGGCTTGTGCAGGTCTACAATCTTTGGAATATGGGTTGGTGGTTCATGGCAAAGCT ATCAAGTCTGGACTTGGTTTAGATGCTTTTGTTTCAAGCACTGTTGTTGACATGTACTGC AAATGCGGCGCGATAACAGAGGCTCAGAAACTCCATGATAGAATTGGGGGGCAAGAACTT GTTTCGTGGAACTCCATCATATCAGGTTTTTCACTCACCAAACAGAGTGAAGAGGCACAG AGATTCTTCTCAGAGATGCTAGACATGGGTGTAAAACCTGACCATTTTACTTACGCCACC GTTCTTGACACTTGTGCTAATCTGGCTACCATTGAGTTGGGGAAACAGATCCATGGTCAG ATTATCAAACAGGAAATGCTTGGAGACGAATATATCTCCAGCACTCTTGTAGACATGTAT GCCAAGTGTGGGAACATGCCAGACTCGCTGCTAATGTTCGAGAAGGCGCGGAAACTGGAT TTCGTATCATGGAACGCCATGATATGTGGCTACGCGCTCCACGGCCAGGGACTTGAAGCC CTGGAGATGTTTGAGAGGATGCAGAGAGCAAATGTGGTGCCGAACCACGCGACTTTCGTC GCAGTTCTGCGGGCATGCAGCCATGTCGGCCTGCTGGACGATGGATGCCAGTATTTCCAT CTGATGACAAGCCGCTACAAACTGGTTCCTCAACTGGAACACTTTGCTTGCATGGTGGAT ATACTGGGACGCTCAAAGGGCCCACAGGAAGCCCTAGAATTTATCAGAAGCATGCCTATT GAGGCAGACGCTGTCGTATGGAAGACTCTGCTAAGCATTTGCAAGATCCGTCAAGACGTC GAAGTGGCCGAAACTGCCGCTAGCAATGTCCTACGGCTAGACCCAGACGACGCGTCGGTT TACATTCTTCTCTCTAACGTATACGCTGGATCCGGGAAATGGGTCGATGTTTCAAGGACC AGAAGGCTAATGAGGCAGGGACGGCTGAGAAAGGAACCTGGTTGTAGCTGGATCGAGGTG CAATCCGAGATGCACGGTTTCCTTGTCGGCGATAAGGTTCATCCCAGGTCGAAGGAGGTG TATGAGATGCTGAATAGTCTAATCGGTGAGATGAAACTCTCTGGATATGAACCTGCATCA GCATTGTTTGCTGAGGTTGAAGAAGAGGAGAGTACATCCGAGCAAGATGACTTGGTTAGA GTCGTTGGTGGTTAA