Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d023314_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:2775081:2777402:1 gene:Zm00001d023314 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phototropic-resoponsive NPH3 family protein
Sequence	ATGCATCTGTCTCTAGGGTGTAGAGATCCTGCTCATTGTACGGTAGCTGCCACCGTCTCA TCGTCAACCATGTCTGCTGCTTCCACCGTGGATCCTCATCCTCCTCATCAGCAGCAGCAG TGCAGCGATAAGGTGTCGTCCATGGAGATGGAGATCCCCGCCGACCTTATCATCCGGATC GGCGAGTCCGTTTTCCCTCTCCACAAGGCGGTGATGGTGCCCAAGTGCGGCTACATCCGC CGGGCCGTCGAGGCGGTGGCGACCAGGCCCAGCAGCAAGGGCGGCGCCGACGCCGACGCC GACCCGCCGGCCACCGTCGAGCTGGACCTCTCGGCGCTGCCGGGCGGCGCCGACGCGTTC GACAAGGCGGCGCGCTACTGCTACGGCGCCAACTTCGAGATCACGCCGCAAAACGCGGCG GCGCTGCGCTGCGCCGCGGCGTTCCTGGACATGCGCCACGCCTCAGCGGACCTGGCCGGG CGCGTGGACGAGTTCCTGGCGCGGGCGGCGCTGCGCGCGCTCCCGGGCGCCGTGGCCGTG CTCCGCTCCTGCGAGGCGCCCGGCCTGCGCGCGGCCGCCGAGGAGCTCGGCGTCGCGCGC CGCGCCGCGGACGCCGTCGCGCGCGGCGTCTGCGCCGAGGCGCTGTCCCTGTCGTACTCG TCGGCGTCGCGCGGCCCCGGGTGGTGGAAGCTGGAGCTGGCGGCGCTGTCGCCGCGCTCG TTCGGGAAGGTCGTCACGGCGCTGCGGTGCCGCCGCGCCGAGCCGGCCGTGGTGGCCGCG GCGGCGGCGGCCTACGCGGAGCTCGTCCTGGCCGAGGTCCTCGCGGCGCCCCAGGACCGC GCGGACCACCGCGCGCTGCTCGAGTCCGTGGTCGACGTGCTGCCCTCGCCCGCCGACGCG CCCGGCGTCCCGGCGCCGTTCCTCTGCCGCCTCCTCCACGCCGCCGTCGCCGCCGGGGCG TCCGCCAAGACGTGCCGCGACCTCGAGCTCCGCGTCGCCGCCGTGCTCGACCAGGCCACC GCCCAGGACCTGCTCGCCGTCGCGCTGGACGCCACCGGGGAGCGCGTCAGGAACACGGAC ATCGTGCGCCGCGTCGTCGTCGCCTTCGTCGAGCGCCAGGCGGCGGTGACGCCCGCGGGT GAGCGGAGGAGCCGCCGGGCGTCCATGTCCGGGACGACGGCGGCGACGGAGCTCGGTGCC GCCAGGCCCGGCGCGCTGGAGAAGGTCGCCATGATGGTGGACGAAGTGGCGGCGGAGATC GCGACGGAGGAGGCGCTGCCCATCTCCAAGTTCGTCGGCGTGGCCGGCGCGGTGCCCAAG GACGCGCGCCCGTCGCACGACTGCCTGTACCGCGCCGTCGACATCTACCTCAAGACGCAC CCGGAGCTGGACGAGATCCAGCGGGAGAAGGTCTGCAGCGTCATGGACCCGCTCAAGCTC TCGTACCAGGCGCGCACGCACGCGTCGCAGAACAAGCGGCTGCCGCTGCAGGCCGCGCTC AGCGCGCTCTACTACGACGAGCTCAAGCTCCGCAGCGCCGCGACGGCCGACGTGGTATTG GACACGCAGTCGTCGGCCGCGGGGAGGGCTTGCGCGCAGGCCAGGGCGGCGGACGCGGCG CTGGCGCGAGAGAACGAGGCGCTGCGGTCAGAGCTGGCACGGATGCGGGCCTACCTGTCA GGGATGGAGCGCAGCAAAGGGGGCCGGTCAACGCCGCCGTCCTCGCCGTCTCGGAGGGCA AAGAAAGCAAGCTTCCTGGGCTCCGTGTCCCGCACTATGAGTCGGCTGAACCCGTTTAGA AGTGGGGGGTGGATGGCGAAGGTTACGACCAGTAACGCCGCCGGTGGTGGACGCCAGAGC AAAACGATGATGCAGCATGTGGTGACACCCAAGAGGAGGAGGGCATCCATAAGTTAA

Peptide Sequence

PEP ID	Zm00001d023314_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:2775081:2777402:1 gene:Zm00001d023314 transcript:Zm00001d023314_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phototropic-resoponsive NPH3 family protein
Sequence	MHLSLGCRDPAHCTVAATVSSSTMSAASTVDPHPPHQQQQCSDKVSSMEMEIPADLIIRI GESVFPLHKAVMVPKCGYIRRAVEAVATRPSSKGGADADADPPATVELDLSALPGGADAF DKAARYCYGANFEITPQNAAALRCAAAFLDMRHASADLAGRVDEFLARAALRALPGAVAV LRSCEAPGLRAAAEELGVARRAADAVARGVCAEALSLSYSSASRGPGWWKLELAALSPRS FGKVVTALRCRRAEPAVVAAAAAAYAELVLAEVLAAPQDRADHRALLESVVDVLPSPADA PGVPAPFLCRLLHAAVAAGASAKTCRDLELRVAAVLDQATAQDLLAVALDATGERVRNTD IVRRVVVAFVERQAAVTPAGERRSRRASMSGTTAATELGAARPGALEKVAMMVDEVAAEI ATEEALPISKFVGVAGAVPKDARPSHDCLYRAVDIYLKTHPELDEIQREKVCSVMDPLKL SYQARTHASQNKRLPLQAALSALYYDELKLRSAATADVVLDTQSSAAGRACAQARAADAA LARENEALRSELARMRAYLSGMERSKGGRSTPPSSPSRRAKKASFLGSVSRTMSRLNPFR SGGWMAKVTTSNAAGGGRQSKTMMQHVVTPKRRRASIS

Transcript Sequence

Transcript ID	Zm00001d023314_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:2775081:2777402:1 gene:Zm00001d023314 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phototropic-resoponsive NPH3 family protein
Sequence	CTTCGTGAAGAGGCTGAGAGCTCGCCTTGCATGCACGCGCACACCTCTGCTTGGGTGTAC GTGCACAGCGGCAGCAGCGGACTAGGAGCTCCATGCATCTGTCTCTAGGGTGTAGAGATC CTGCTCATTGTACGGTAGCTGCCACCGTCTCATCGTCAACCATGTCTGCTGCTTCCACCG TGGATCCTCATCCTCCTCATCAGCAGCAGCAGTGCAGCGATAAGGTGTCGTCCATGGAGA TGGAGATCCCCGCCGACCTTATCATCCGGATCGGCGAGTCCGTTTTCCCTCTCCACAAGG CGGTGATGGTGCCCAAGTGCGGCTACATCCGCCGGGCCGTCGAGGCGGTGGCGACCAGGC CCAGCAGCAAGGGCGGCGCCGACGCCGACGCCGACCCGCCGGCCACCGTCGAGCTGGACC TCTCGGCGCTGCCGGGCGGCGCCGACGCGTTCGACAAGGCGGCGCGCTACTGCTACGGCG CCAACTTCGAGATCACGCCGCAAAACGCGGCGGCGCTGCGCTGCGCCGCGGCGTTCCTGG ACATGCGCCACGCCTCAGCGGACCTGGCCGGGCGCGTGGACGAGTTCCTGGCGCGGGCGG CGCTGCGCGCGCTCCCGGGCGCCGTGGCCGTGCTCCGCTCCTGCGAGGCGCCCGGCCTGC GCGCGGCCGCCGAGGAGCTCGGCGTCGCGCGCCGCGCCGCGGACGCCGTCGCGCGCGGCG TCTGCGCCGAGGCGCTGTCCCTGTCGTACTCGTCGGCGTCGCGCGGCCCCGGGTGGTGGA AGCTGGAGCTGGCGGCGCTGTCGCCGCGCTCGTTCGGGAAGGTCGTCACGGCGCTGCGGT GCCGCCGCGCCGAGCCGGCCGTGGTGGCCGCGGCGGCGGCGGCCTACGCGGAGCTCGTCC TGGCCGAGGTCCTCGCGGCGCCCCAGGACCGCGCGGACCACCGCGCGCTGCTCGAGTCCG TGGTCGACGTGCTGCCCTCGCCCGCCGACGCGCCCGGCGTCCCGGCGCCGTTCCTCTGCC GCCTCCTCCACGCCGCCGTCGCCGCCGGGGCGTCCGCCAAGACGTGCCGCGACCTCGAGC TCCGCGTCGCCGCCGTGCTCGACCAGGCCACCGCCCAGGACCTGCTCGCCGTCGCGCTGG ACGCCACCGGGGAGCGCGTCAGGAACACGGACATCGTGCGCCGCGTCGTCGTCGCCTTCG TCGAGCGCCAGGCGGCGGTGACGCCCGCGGGTGAGCGGAGGAGCCGCCGGGCGTCCATGT CCGGGACGACGGCGGCGACGGAGCTCGGTGCCGCCAGGCCCGGCGCGCTGGAGAAGGTCG CCATGATGGTGGACGAAGTGGCGGCGGAGATCGCGACGGAGGAGGCGCTGCCCATCTCCA AGTTCGTCGGCGTGGCCGGCGCGGTGCCCAAGGACGCGCGCCCGTCGCACGACTGCCTGT ACCGCGCCGTCGACATCTACCTCAAGACGCACCCGGAGCTGGACGAGATCCAGCGGGAGA AGGTCTGCAGCGTCATGGACCCGCTCAAGCTCTCGTACCAGGCGCGCACGCACGCGTCGC AGAACAAGCGGCTGCCGCTGCAGGCCGCGCTCAGCGCGCTCTACTACGACGAGCTCAAGC TCCGCAGCGCCGCGACGGCCGACGTGGTATTGGACACGCAGTCGTCGGCCGCGGGGAGGG CTTGCGCGCAGGCCAGGGCGGCGGACGCGGCGCTGGCGCGAGAGAACGAGGCGCTGCGGT CAGAGCTGGCACGGATGCGGGCCTACCTGTCAGGGATGGAGCGCAGCAAAGGGGGCCGGT CAACGCCGCCGTCCTCGCCGTCTCGGAGGGCAAAGAAAGCAAGCTTCCTGGGCTCCGTGT CCCGCACTATGAGTCGGCTGAACCCGTTTAGAAGTGGGGGGTGGATGGCGAAGGTTACGA CCAGTAACGCCGCCGGTGGTGGACGCCAGAGCAAAACGATGATGCAGCATGTGGTGACAC CCAAGAGGAGGAGGGCATCCATAAGTTAATAATCATGACGCTGTCGTGTAATTTTAGGAG GATACCGTGTGTGCATGGCTTGTAGTTTGATTATTATTGT