Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d023292_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:10:2240626:2246156:-1 gene:Zm00001d023292 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trigger factor-like protein TIG Chloroplastic
Sequence

ATGGAGCTCGCCACCGTCGCCGCTGCAGTCGCCTCCGCCGCTGCGCGCCCGCACGGGCCT
TTCTCCTCTCCCCGCGCAGTCTCTGCCTCCGTCTCGTGGACCAGTCTCTCGCTCGCCTAC
ACCTCCCGCTGTCTCTCCTCCACGTCCTCGCGACGGCGGCTGCGCTGGCTCCCCGTCACC
TCGGCCGCCGTGGAGCTCCGCGAGGCCACTGCCGGGGGCGGAGACTCGCTCCGTGTCACC
AAGACGCCGCAGCCTGGATCCAGTGTTAAGTTCAGCGTGGAGGTGCCTACTTCCATCATT
CACGAGTGCTACCAATCCACGCTACAGGAGTACGCCAAACGTGTTAAGGTTCCTGGATTT
CGGCCTGGGAAGACCATTCCAGAAAACGTTCTTATAAACTATGTAGGACCGCAACATGTA
CAGGATGCCACGATTGAAGCTATCTTAAAACATACGCTTCCTCAAGCACTGTCCTCGGTA
GAGGAGAGGGCATTAGAAGATTCTGTTCGCATTCTGACTCAATTTGATGATATGAGAAAT
TCTTTCTCACTCGACAATGTGTTTAGATATGATGTTGCTGTGGATGTTGCCCCTGAAGTC
CGATGGTTATCTGAAGACAAATATAGGAACCTCAAAGTTGTCGTTGAAATAGATGAAGCT
GTTGATGCGGAAAAGGCGGCAGAGAAAGAGCTTCAGCGTCGTCATAAAGCTCTAGGCTTA
CTTAGAATTGTGGCTGACAGAGGCCTCCAGATTGGTGATCTGGTGGTGCTGGATATATTT
GCGGAAAGCATTAACAATGATGGCTCTAGAGGTGAAAAAATTTCATCGGCTGAGAGTACA
GGTTTGTCAATTTTCCACACATCTGGCTTACATGTTATTTTCATAGCTTCGCCTTTAAAA
TTTATTATGAGTTACCCCCTTATTATAAAAAAGGGATTCTAA

Peptide Sequence

PEP ID

Zm00001d023292_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:10:2240626:2246156:-1 gene:Zm00001d023292 transcript:Zm00001d023292_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trigger factor-like protein TIG Chloroplastic
Sequence

MELATVAAAVASAAARPHGPFSSPRAVSASVSWTSLSLAYTSRCLSSTSSRRRLRWLPVT
SAAVELREATAGGGDSLRVTKTPQPGSSVKFSVEVPTSIIHECYQSTLQEYAKRVKVPGF
RPGKTIPENVLINYVGPQHVQDATIEAILKHTLPQALSSVEERALEDSVRILTQFDDMRN
SFSLDNVFRYDVAVDVAPEVRWLSEDKYRNLKVVVEIDEAVDAEKAAEKELQRRHKALGL
LRIVADRGLQIGDLVVLDIFAESINNDGSRGEKISSAESTGLSIFHTSGLHVIFIASPLK
FIMSYPLIIKKGF

Transcript Sequence

Transcript ID

Zm00001d023292_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:2240626:2246156:-1 gene:Zm00001d023292 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trigger factor-like protein TIG Chloroplastic
Sequence

ACGACACGACACGCGCCGGCCACAGAAACAGCGCTTCACTCCCCTCCGCGCCGCGGCGAC
CATGGAGCTCGCCACCGTCGCCGCTGCAGTCGCCTCCGCCGCTGCGCGCCCGCACGGGCC
TTTCTCCTCTCCCCGCGCAGTCTCTGCCTCCGTCTCGTGGACCAGTCTCTCGCTCGCCTA
CACCTCCCGCTGTCTCTCCTCCACGTCCTCGCGACGGCGGCTGCGCTGGCTCCCCGTCAC
CTCGGCCGCCGTGGAGCTCCGCGAGGCCACTGCCGGGGGCGGAGACTCGCTCCGTGTCAC
CAAGACGCCGCAGCCTGGATCCAGTGTTAAGTTCAGCGTGGAGGTGCCTACTTCCATCAT
TCACGAGTGCTACCAATCCACGCTACAGGAGTACGCCAAACGTGTTAAGGTTCCTGGATT
TCGGCCTGGGAAGACCATTCCAGAAAACGTTCTTATAAACTATGTAGGACCGCAACATGT
ACAGGATGCCACGATTGAAGCTATCTTAAAACATACGCTTCCTCAAGCACTGTCCTCGGT
AGAGGAGAGGGCATTAGAAGATTCTGTTCGCATTCTGACTCAATTTGATGATATGAGAAA
TTCTTTCTCACTCGACAATGTGTTTAGATATGATGTTGCTGTGGATGTTGCCCCTGAAGT
CCGATGGTTATCTGAAGACAAATATAGGAACCTCAAAGTTGTCGTTGAAATAGATGAAGC
TGTTGATGCGGAAAAGGCGGCAGAGAAAGAGCTTCAGCGTCGTCATAAAGCTCTAGGCTT
ACTTAGAATTGTGGCTGACAGAGGCCTCCAGATTGGTGATCTGGTGGTGCTGGATATATT
TGCGGAAAGCATTAACAATGATGGCTCTAGAGGTGAAAAAATTTCATCGGCTGAGAGTAC
AGGTTTGTCAATTTTCCACACATCTGGCTTACATGTTATTTTCATAGCTTCGCCTTTAAA
ATTTATTATGAGTTACCCCCTTATTATAAAAAAGGGATTCTAATGCTTTATATAAAAACT
ATTGCGCCTAAAAGAAATGCTGTCATGCTCATGCCACACGTTTATGTTTGGTGCATTTGT
TTCGCTGCAATTGATGTGGTGACATAAGTATCTATTAAATATACTTGTCTGCTGAGTTTT
CTTTGTGCACCAGTTAGTATGCTGACTAAGACAACTGCCTTGCATCTCTGGTTGTTTGGA
ATCACAGTGCTATACTATATACCCTACTATGATTTTCCAGGTTTCCACTTGGACACTGAG
GAAAATAGTAACCTTGTTCCTGGATTTCTTGGTTCGTTGATTGGGATTCGTGCTGGTGAG
ACTAGATCATTTCCTATCCAGTTCCCCGAGTCATTTGAGCGAGAAAGTCTACGAGGTGTC
CGTGCACAGTTTACTGTTGTGTGTAAAGAGCTGTTCTACAGAGAGTTGCCAGTAATGGAT
GACTCACTTGCTGTAAAGCTTCTTCCAGGATGCACTACAATAGACGAGGTTCGAGAGCGT
ATTTTGAAAAGATGTAAAGAAGTGGAGAAGACGGCCATAGAACAAGCAACAGACAACGCG
ATCCTTGACCAGCTCGGGAAGTTGGTCGAGGTCGACGTCCCTCGTGCCTTGTTTCAAGAG
CAAGGGCAGCAGCTTTATGGAGCCAAGCTTCTGCAGCTTCAGGCGGAAAGGAAGCTGGAT
AAAGACCAGCTAGCTTCGTTATCAACCAAGAGGTCAGTGCAGGCGTACCTAGAAGATGAG
AAGGAGAACATTACAAGAATCATTAAACAGATGCTGGCCGTTGGCGATATTTTCAAATCC
GAGAACTTACAGTACTCGACTGATCAGCTCGTCAAGGAAGTTGAGAACTCCATAGCGGAG
TTCAAACAGTACAACCAAGACTATGATGAGGACAACATCAGGCAGCAGGTCCAGGATGTC
CTAGAGGCGGCGAAGGTGCTTGAATGGCTCAAGGAGAACTGCTCGGTCGAGTATATCAGG
CGATGAGTCCCACGATGCTGGGTCAAGGAAAGCTCCTCTGAACGTGAGAAAGATGGTGGC
TGGTGTGGCGGTCGGCAGTTTTGCGAGTGGCCTTGGTCCTTGCCAATGCCAACCAGCCTA
GAGCAGTGCAGTGATTAAGAGGTGTGGCTAACAAACATTTGTCTATTGACTCGGTTCATG
ATATAAATTCGGATTTGGAGCTTTAGTAACTAGCATGTTTTCGGTAGAGACAATCACATC
GCATTAGAGGGCGTGTTTGTTTGTGTTTATAATCTCCCCAGATTATATAATCCAACATAT
TTATATT