Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d023270_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:1779606:1785051:1 gene:Zm00001d023270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGACTCGGCGCCATCGTCCGCCGCACCTGACCCTCCCCTTTCCCCTCCACCTTCC
ACGCCCCCGCACCCGCACCCGCACCCGCCCGAGGAGGAGGGGGGCTGCTGGGTGCTCGTT
CCGGCCAGCGAGGTCGAGGGGGCCCACGCGCCCAAGGTCATCCACTGGGACGACCTGCAG
CAGGAGCTCGCGCGCCTCTGGAGCCTCTCCGCCGCGCTCCAGCCCGCCGAGGACCGCAAG
GCGCACCTCACCGCGCGCCTCGAGTCCGCTCTACAGGTTAGGCAGGCGTTTCTCGAGCAG
GACAATGAGTTGGCTGAAATGAGGCAGAGACTGCAAGAGCGTACTGACCGTCTGGGGGAT
CTGAAGACGCGCGCCAAGAAGCTGTCAGAGGATGTTGTGGTTCGGAGGGAACAGCTTTGT
GTCAAGATCAGAACGTTGTCAGGGGCAAGCAAGGCTCTCGAGGCTGCACGCAGCAATCTG
AAGGAAGCTAATGAATTGCTGTCAGGGGAAAATGGTTGTGGGCGCCTTAAAGATCTGGAA
CAGCAGTTACGGATGAGACAGCAATATATGGTAGCGCAAGTTGCTCAGATATATCCTGTG
AGGCCTTTGGATGAACAATCTTCAGATCACAAACCTGGATTTACTTCCAACATAACGAAA
ACAAGTAATGTTGAATCAGTGTTGCCAAATAGCCCCCAAAACAGACCTTTGGTCATATTG
GGTCTACAGTTATCAAAGCTTTCTGTGAAAAAGACTGGCTACTTCAGTGACAAGACAGAG
GTTCAGAAATCTTCGACTGTTCTTGGATATGCTGCTCATGCAGTCTCCCTCATTGCATCC
TATCTCAATGTTCCTCTTCGGTATCCTTTGCGCTTTGGAGGTTCACGGTCATATGTTCTC
GACCCTGCGCCTTCAGTTGAGCCATCATCTATAACCTCAGTAGGAACGTCTGTCCCTCCC
AGCACAAGCATGAGGACAACGGAGTTCCCTCTGTTTCTTGACAGCCAGGAGACAACAAGG
TCATCATATGCGATATTCTTGTTGAACAAGGATATCGAGCAACTTCTGAATTACATTGGC
GCTGAAAGCCTCGGGCCAAGACATGTCCTAGCAAACCTGAAGCAGCTGACAACGATCATC
CAGTCACAAGGATACATTTCTGATGGGCGACGGCGACCTGACGCCGACCCCGCCACGGAG
ACGACGCCGCTGCACCCGTCCTTCTTCCACGACATCCCGCTGTCGCCGCCCCCAGCAGGC
ACGTACATCGTGCAGGTGCCCAAGGACCAGGTCCTCCGCGAGCCACCCCCGGACCGCGCG
CGCCGCTACAAGAAGCTCGCTGGCCAGCCCGCGCGGCGCCGCCGCCTCCGCCGCGCGTGC
TGCCTCTCCTGCGCCGCGCTCCTCGCCATACTCCTCGCCGCCGCCGCCTTCGCGGGCGCC
GTCTGCCTCGCCTTCCGCCCGCGCGCGCCGTCCTTCTCCGTGCCCTCCGCGCTCGCCATC
CGCGGCCTCGCCAACGCCACCGCCACCGCCACCGGCGCCGCAGCCCCGCTCTCCCCCGCG
CTCGACGCCGCCGTGCGCGCCGACAACGGGCGCAACGGGAAGGTGGGCGTGGAGTACCGC
GCGGGCGGCGCCGTCGCGGTGTCCTACGCGGGGCAGCGGCTGGCCGCGGGCCCGTGGCCC
GCGTTCCGCCAGGCGCCGCGGAACGTCACGGTGGTCGCGGCCGCCATGCGGGGCCAGGGC
GTGCGCCTCTCGGATGCGCGCAGGCGGCAGCTCGCCGCGGACCGGGCCGCGGGCGCCGTG
CCGCTCACGCTGGAGGCCAGGGTCCCCGTGCGCCTGCGCTTCGGCAAGGTGCTGCGGACG
TGGACCGTCCACGTCAGGGCCCGCTGCGAGGTGGCCGTCGACAGGCTGGACGGGGATGCC
ACCGCGGTCAACAGGGGCTGCAGGGTCAGGGTCAAGCCGCTATGGTGGTGGTGGTGA

Peptide Sequence

PEP ID

Zm00001d023270_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:1779606:1785051:1 gene:Zm00001d023270 transcript:Zm00001d023270_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEDSAPSSAAPDPPLSPPPSTPPHPHPHPPEEEGGCWVLVPASEVEGAHAPKVIHWDDLQ
QELARLWSLSAALQPAEDRKAHLTARLESALQVRQAFLEQDNELAEMRQRLQERTDRLGD
LKTRAKKLSEDVVVRREQLCVKIRTLSGASKALEAARSNLKEANELLSGENGCGRLKDLE
QQLRMRQQYMVAQVAQIYPVRPLDEQSSDHKPGFTSNITKTSNVESVLPNSPQNRPLVIL
GLQLSKLSVKKTGYFSDKTEVQKSSTVLGYAAHAVSLIASYLNVPLRYPLRFGGSRSYVL
DPAPSVEPSSITSVGTSVPPSTSMRTTEFPLFLDSQETTRSSYAIFLLNKDIEQLLNYIG
AESLGPRHVLANLKQLTTIIQSQGYISDGRRRPDADPATETTPLHPSFFHDIPLSPPPAG
TYIVQVPKDQVLREPPPDRARRYKKLAGQPARRRRLRRACCLSCAALLAILLAAAAFAGA
VCLAFRPRAPSFSVPSALAIRGLANATATATGAAAPLSPALDAAVRADNGRNGKVGVEYR
AGGAVAVSYAGQRLAAGPWPAFRQAPRNVTVVAAAMRGQGVRLSDARRRQLAADRAAGAV
PLTLEARVPVRLRFGKVLRTWTVHVRARCEVAVDRLDGDATAVNRGCRVRVKPLWWWW

Transcript Sequence

Transcript ID

Zm00001d023270_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:1779606:1785051:1 gene:Zm00001d023270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCGAGGCCAAGCCAGGCACAAAAAAACCAAACCAAACCAAACCGAAAGCTGTCGCCACC
GCTCGCCGGAGAAGGAGCAAACGTTCCCCAACCCACCGGAGCTCCCTCCAAAACCCACCA
CAAGGCTTGCCCAAGGCTTCCCCTCGCCCATGCCACGCTCGCGCCTCCCCCCGACTCCAC
ACCCGCGGGCATGATCCGCGGCGATGGAGGACTCGGCGCCATCGTCCGCCGCACCTGACC
CTCCCCTTTCCCCTCCACCTTCCACGCCCCCGCACCCGCACCCGCACCCGCCCGAGGAGG
AGGGGGGCTGCTGGGTGCTCGTTCCGGCCAGCGAGGTCGAGGGGGCCCACGCGCCCAAGG
TCATCCACTGGGACGACCTGCAGCAGGAGCTCGCGCGCCTCTGGAGCCTCTCCGCCGCGC
TCCAGCCCGCCGAGGACCGCAAGGCGCACCTCACCGCGCGCCTCGAGTCCGCTCTACAGG
TTAGGCAGGCGTTTCTCGAGCAGGACAATGAGTTGGCTGAAATGAGGCAGAGACTGCAAG
AGCGTACTGACCGTCTGGGGGATCTGAAGACGCGCGCCAAGAAGCTGTCAGAGGATGTTG
TGGTTCGGAGGGAACAGCTTTGTGTCAAGATCAGAACGTTGTCAGGGGCAAGCAAGGCTC
TCGAGGCTGCACGCAGCAATCTGAAGGAAGCTAATGAATTGCTGTCAGGGGAAAATGGTT
GTGGGCGCCTTAAAGATCTGGAACAGCAGTTACGGATGAGACAGCAATATATGGTAGCGC
AAGTTGCTCAGATATATCCTGTGAGGCCTTTGGATGAACAATCTTCAGATCACAAACCTG
GATTTACTTCCAACATAACGAAAACAAGTAATGTTGAATCAGTGTTGCCAAATAGCCCCC
AAAACAGACCTTTGGTCATATTGGGTCTACAGTTATCAAAGCTTTCTGTGAAAAAGACTG
GCTACTTCAGTGACAAGACAGAGGTTCAGAAATCTTCGACTGTTCTTGGATATGCTGCTC
ATGCAGTCTCCCTCATTGCATCCTATCTCAATGTTCCTCTTCGGTATCCTTTGCGCTTTG
GAGGTTCACGGTCATATGTTCTCGACCCTGCGCCTTCAGTTGAGCCATCATCTATAACCT
CAGTAGGAACGTCTGTCCCTCCCAGCACAAGCATGAGGACAACGGAGTTCCCTCTGTTTC
TTGACAGCCAGGAGACAACAAGGTCATCATATGCGATATTCTTGTTGAACAAGGATATCG
AGCAACTTCTGAATTACATTGGCGCTGAAAGCCTCGGGCCAAGACATGTCCTAGCAAACC
TGAAGCAGCTGACAACGATCATCCAGTCACAAGGATACATTTCTGATGGGCGACGGCGAC
CTGACGCCGACCCCGCCACGGAGACGACGCCGCTGCACCCGTCCTTCTTCCACGACATCC
CGCTGTCGCCGCCCCCAGCAGGCACGTACATCGTGCAGGTGCCCAAGGACCAGGTCCTCC
GCGAGCCACCCCCGGACCGCGCGCGCCGCTACAAGAAGCTCGCTGGCCAGCCCGCGCGGC
GCCGCCGCCTCCGCCGCGCGTGCTGCCTCTCCTGCGCCGCGCTCCTCGCCATACTCCTCG
CCGCCGCCGCCTTCGCGGGCGCCGTCTGCCTCGCCTTCCGCCCGCGCGCGCCGTCCTTCT
CCGTGCCCTCCGCGCTCGCCATCCGCGGCCTCGCCAACGCCACCGCCACCGCCACCGGCG
CCGCAGCCCCGCTCTCCCCCGCGCTCGACGCCGCCGTGCGCGCCGACAACGGGCGCAACG
GGAAGGTGGGCGTGGAGTACCGCGCGGGCGGCGCCGTCGCGGTGTCCTACGCGGGGCAGC
GGCTGGCCGCGGGCCCGTGGCCCGCGTTCCGCCAGGCGCCGCGGAACGTCACGGTGGTCG
CGGCCGCCATGCGGGGCCAGGGCGTGCGCCTCTCGGATGCGCGCAGGCGGCAGCTCGCCG
CGGACCGGGCCGCGGGCGCCGTGCCGCTCACGCTGGAGGCCAGGGTCCCCGTGCGCCTGC
GCTTCGGCAAGGTGCTGCGGACGTGGACCGTCCACGTCAGGGCCCGCTGCGAGGTGGCCG
TCGACAGGCTGGACGGGGATGCCACCGCGGTCAACAGGGGCTGCAGGGTCAGGGTCAAGC
CGCTATGGTGGTGGTGGTGA