Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d023225_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:826372:828398:-1 gene:Zm00001d023225 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ferritin homolog2 description:Protein trichome birefringence-like 34
Sequence

ATGGCGCCTGAGGAAAGGATGAAGCAGACAGAGGGCAGTCACAAGGTGGTAACAGCAGCA
GCAGCAGGTGGCAAGATGGCGGTGCTCCACTCTCCGGTCGGAGTGAGGAGCATCGTGACC
TCCCTGGTGGCTTTCTTCATCCTAGCCAGCTCCGTGGTGTTCCTCCTCCTCGACAGAGAA
GCCGGGCTCCAAGAAGAACCGGCGATAAGAGCCGGCGGCGGCGGCGGCGACGAGGAGTGC
AGCTGGTCTCGGGGGCGCTGGGTGTACGACAACGTGTCCCGGCCGCTGTACGACGGGCTC
AAGTGCGCCTTCATCTTCCCCGAGGTGGCCTGTGACAAGTATGGCAGGAAGGATGTCATG
TACCAGCACTGGAGATGGCAGCCTCATGGTCATGGATGCGACCTCCCAAGATTCGATGCC
ATGAAGCTGCTTGAAGAGCTGAGGAACAAGAGACTGGTGTTTGTGGGTGACTCGGTGAAC
AGGAACCAATGGGTCTCTCTCGTGTGCATGGTGGAGGCCTCGATACCTGACGACAGGCTC
AAGATGCGCATCTTCAATGGCTCGCTCATCTCCTTCAAGGCACTGGAGTACAACGCGACG
ATAGATTTCTACTGGTCGCCGCTGCTGGTGGAGTCTAACAGCGACAACCCCATCATCCAC
CGGGTGGAGTACCGGATCATAAGGGCAGACAGGATCGAGAAGCACGCCAGCGTGTGGAGG
GACGCCGACGTCATCGTCTTCAACTCTTACCTGTGGTGGAGGAAGCAGAAGGATGACATG
AGGATGAAGGTCATGTACGGTTCATTTGAAGATGGTGACGCAAAGCTAGACGAGATGGAA
ATGGCGGATGGTTTCGAGATAGCTATCAAGAAACTGACGGAATGGCTTGCAAAGAACATT
GACAAGAACAAGACTAGGATATTTTTCGCAGGATCATCACCAACACATTCCTGGGCTAGC
AACTGGGGCGGACAAGACAAGAACAAGTGCCTGAACGAAACGGAGCCGATCAGCTACAGA
CCCGGCGGCGGGTACAAGGCTGCAACCACGGACTACAGCCTGATGGCCATGGCCAGGTCC
TACTTCCGGCGGACGCTGGAGCCGAGAGGCATACGCGTCCAGATACTCAACATCACGGAG
CTGTCCGACTACCGCAAGGACGGGCATCCCACGGTGTTCAGGAGGCAGTTCGTTCCCCTG
ACCAAGGAGCAGATCGCGGACCCGGCCAGCTACGCGGACTGCACGCACTGGTGCCTCCCA
GGCGTCCCCGACGTCTGGAACGAGTTCCTGTATGGCTACCTCACGCAGCAGAGCAAATGA

Peptide Sequence

PEP ID

Zm00001d023225_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:826372:828398:-1 gene:Zm00001d023225 transcript:Zm00001d023225_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ferritin homolog2 description:Protein trichome birefringence-like 34
Sequence

MAPEERMKQTEGSHKVVTAAAAGGKMAVLHSPVGVRSIVTSLVAFFILASSVVFLLLDRE
AGLQEEPAIRAGGGGGDEECSWSRGRWVYDNVSRPLYDGLKCAFIFPEVACDKYGRKDVM
YQHWRWQPHGHGCDLPRFDAMKLLEELRNKRLVFVGDSVNRNQWVSLVCMVEASIPDDRL
KMRIFNGSLISFKALEYNATIDFYWSPLLVESNSDNPIIHRVEYRIIRADRIEKHASVWR
DADVIVFNSYLWWRKQKDDMRMKVMYGSFEDGDAKLDEMEMADGFEIAIKKLTEWLAKNI
DKNKTRIFFAGSSPTHSWASNWGGQDKNKCLNETEPISYRPGGGYKAATTDYSLMAMARS
YFRRTLEPRGIRVQILNITELSDYRKDGHPTVFRRQFVPLTKEQIADPASYADCTHWCLP
GVPDVWNEFLYGYLTQQSK

Transcript Sequence

Transcript ID

Zm00001d023225_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:826372:828398:-1 gene:Zm00001d023225 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ferritin homolog2 description:Protein trichome birefringence-like 34
Sequence

TACAGACTCGACAGGTACGGTGAGCATAAAAGAGGAGAGCCGATAAGCACAATGGCGCCT
GAGGAAAGGATGAAGCAGACAGAGGGCAGTCACAAGGTGGTAACAGCAGCAGCAGCAGGT
GGCAAGATGGCGGTGCTCCACTCTCCGGTCGGAGTGAGGAGCATCGTGACCTCCCTGGTG
GCTTTCTTCATCCTAGCCAGCTCCGTGGTGTTCCTCCTCCTCGACAGAGAAGCCGGGCTC
CAAGAAGAACCGGCGATAAGAGCCGGCGGCGGCGGCGGCGACGAGGAGTGCAGCTGGTCT
CGGGGGCGCTGGGTGTACGACAACGTGTCCCGGCCGCTGTACGACGGGCTCAAGTGCGCC
TTCATCTTCCCCGAGGTGGCCTGTGACAAGTATGGCAGGAAGGATGTCATGTACCAGCAC
TGGAGATGGCAGCCTCATGGTCATGGATGCGACCTCCCAAGATTCGATGCCATGAAGCTG
CTTGAAGAGCTGAGGAACAAGAGACTGGTGTTTGTGGGTGACTCGGTGAACAGGAACCAA
TGGGTCTCTCTCGTGTGCATGGTGGAGGCCTCGATACCTGACGACAGGCTCAAGATGCGC
ATCTTCAATGGCTCGCTCATCTCCTTCAAGGCACTGGAGTACAACGCGACGATAGATTTC
TACTGGTCGCCGCTGCTGGTGGAGTCTAACAGCGACAACCCCATCATCCACCGGGTGGAG
TACCGGATCATAAGGGCAGACAGGATCGAGAAGCACGCCAGCGTGTGGAGGGACGCCGAC
GTCATCGTCTTCAACTCTTACCTGTGGTGGAGGAAGCAGAAGGATGACATGAGGATGAAG
GTCATGTACGGTTCATTTGAAGATGGTGACGCAAAGCTAGACGAGATGGAAATGGCGGAT
GGTTTCGAGATAGCTATCAAGAAACTGACGGAATGGCTTGCAAAGAACATTGACAAGAAC
AAGACTAGGATATTTTTCGCAGGATCATCACCAACACATTCCTGGGCTAGCAACTGGGGC
GGACAAGACAAGAACAAGTGCCTGAACGAAACGGAGCCGATCAGCTACAGACCCGGCGGC
GGGTACAAGGCTGCAACCACGGACTACAGCCTGATGGCCATGGCCAGGTCCTACTTCCGG
CGGACGCTGGAGCCGAGAGGCATACGCGTCCAGATACTCAACATCACGGAGCTGTCCGAC
TACCGCAAGGACGGGCATCCCACGGTGTTCAGGAGGCAGTTCGTTCCCCTGACCAAGGAG
CAGATCGCGGACCCGGCCAGCTACGCGGACTGCACGCACTGGTGCCTCCCAGGCGTCCCC
GACGTCTGGAACGAGTTCCTGTATGGCTACCTCACGCAGCAGAGCAAATGACGATGCATT
ATTACAAGAATGGCCTTGTTATATGTAGTAGTGTACAGTGCAGTACAGATTGCCAGCTGC
TCCGTTTAGATTATTAGGGATGGACCTGCTGTTACATGTAGAGAGAGACAGACAGGAGAT
CTGTCTTGCCCAACATTAATTCTAGTATCTGTAAATCTTGTTCTTCTTGTCCAACATTAA
TTCTAGGATCTGCTGCTAACCATTTTTTTTGGATTTATGTAAACTGAGTGATTATCTGAA
ATAGAATGATCTGAGTTTGCTGTTCC