Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022627_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:7:181717982:181720096:-1 gene:Zm00001d022627 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein POLLENLESS 3-LIKE 2
Sequence

ATGATGCAGCAGGAGCCCTGGAACGCCGCCGCCGCCATGGGGCTCCTCCGCCCGACCAAG
TCGGCGCCCTGCTCGCCCATCAAGCCGCCGCCGGCGACCATGCTGCGGACTCACTTCCAC
GTCGCGCACAAGGTGCCGGTCGGCGACACGCCCTACGTGCGAGCCAAGCGCGTCCAGCTG
GTGGACAAGGATCCGGAGAAGGCGATCGCGCTGTTCTGGAGTGCGATCAACGCCGGAGAC
CGCGTTGACAGCGCGCTCAAGGACATGGCCATCGTGATGAAGCAGCAGAACCGCGCCGAG
GAGGCCATCGAGGCCATCAAGTCGCTGCGCAGCCGATGCTCCGACCAGGCGCAGGAGTCC
CTCGACAACATCCTCCTCGATCTCTACAAGAGATGCGGGCGGCTGGACGACCAAATCTCG
CTGCTCAAGCACAAGCTGCAGCTGATCAACCAGGGCCACGCCTTCAACGGCAAGCGGACC
AAAACGGCTCGCTCTCAGGGCCGCAAGTTCCAGGTCACCCTGGAGCAAGAAGCCACCAGG
CTCCTTGGTAACCTGGGGTGGGCGCTGATGCAGAAGGAGAACTACACGGAAGCGGAGGGA
GCGTACCGTCGGGCGCTGCTCATCGGGCCGGACAACAACAAGATGTGCAATCTGGGCATC
TGCCTTATGAAGCAGGCCCGCGTGCTCGAGGCCAAGGATGTGCTCAAGCAGGTACGCCCC
GCGGCGGTTGATGGTCTGCGCGGCGCCGACTCTCACCTCAAGGCCTACGAGCGAGCGCAG
GAGATGCTGCGGGACCTCGAGACCAAGCTCATCGGCCGCCCGCCCGCTGACCAGCTCGAC
ACGAACTGGCTCTTCGATGCGCTGCTGCTGGGATCGTCCTCAAGCATCTGGCAGCCGCAG
CCGTGCACCGATCACTTGCTGCCACCTCCTGTTCCGGCTCCAGCCACGGCGCCGCGCGGC
CACTTCGCCGATGAAAACGCCGGTGTGAGCAAGAAGCTGGCGGTGCTCCAGGAGAACATG
CTTAATGTGGACGCGCAGCCCTTCTACTCTTTGCGGGTGCCGTCGCTTGCAGCCAAGTCA
CATAACACGCTGCCTCAGCGGCAACAGCAGCAGAAGCCAGCTCCTGTCCATGATCCCCTG
GGCAACCTGAAGAGAACACGGTCCGGCAATTGCATGGACAAGGCAGGAGCAGTGGTGTTC
AAGGAGCAGAGCATCGACGAGAACAGCGGCAGGAGGAAGTCGCTGTCAGCTGAGGACAGG
TGGCCAGAGCTACCCGACCACAGCGCGTTCGATGAGGCCCTCGTCGCCGTCGTCCTGGCT
CCAGTGCTCGACGACGAACCAACAGCTACTGAAGTCAAGCTGCCGGCGAGCTGCGACACG
AGCCCAGCGGTGAAGGAAAAGATCGGCAAGAGGCTGAGGATCTTCCAGGACATCACACAG
ACAGTGAACAGTTTCTGA

Peptide Sequence

PEP ID

Zm00001d022627_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:7:181717982:181720096:-1 gene:Zm00001d022627 transcript:Zm00001d022627_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein POLLENLESS 3-LIKE 2
Sequence

MMQQEPWNAAAAMGLLRPTKSAPCSPIKPPPATMLRTHFHVAHKVPVGDTPYVRAKRVQL
VDKDPEKAIALFWSAINAGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQES
LDNILLDLYKRCGRLDDQISLLKHKLQLINQGHAFNGKRTKTARSQGRKFQVTLEQEATR
LLGNLGWALMQKENYTEAEGAYRRALLIGPDNNKMCNLGICLMKQARVLEAKDVLKQVRP
AAVDGLRGADSHLKAYERAQEMLRDLETKLIGRPPADQLDTNWLFDALLLGSSSSIWQPQ
PCTDHLLPPPVPAPATAPRGHFADENAGVSKKLAVLQENMLNVDAQPFYSLRVPSLAAKS
HNTLPQRQQQQKPAPVHDPLGNLKRTRSGNCMDKAGAVVFKEQSIDENSGRRKSLSAEDR
WPELPDHSAFDEALVAVVLAPVLDDEPTATEVKLPASCDTSPAVKEKIGKRLRIFQDITQ
TVNSF

Transcript Sequence

Transcript ID

Zm00001d022627_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:181717982:181720096:-1 gene:Zm00001d022627 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein POLLENLESS 3-LIKE 2
Sequence

CCAGCGTACTGCCACTGCCACCGCTCCGCTTTCCCGTCGTCTCCCTGTTGCTCTGCTGCA
CAGCAATCGTCTCGTTTCATACAGGGCAGGGAAGTCAGGAGGAAGATGATGCAGCAGGAG
CCCTGGAACGCCGCCGCCGCCATGGGGCTCCTCCGCCCGACCAAGTCGGCGCCCTGCTCG
CCCATCAAGCCGCCGCCGGCGACCATGCTGCGGACTCACTTCCACGTCGCGCACAAGGTG
CCGGTCGGCGACACGCCCTACGTGCGAGCCAAGCGCGTCCAGCTGGTGGACAAGGATCCG
GAGAAGGCGATCGCGCTGTTCTGGAGTGCGATCAACGCCGGAGACCGCGTTGACAGCGCG
CTCAAGGACATGGCCATCGTGATGAAGCAGCAGAACCGCGCCGAGGAGGCCATCGAGGCC
ATCAAGTCGCTGCGCAGCCGATGCTCCGACCAGGCGCAGGAGTCCCTCGACAACATCCTC
CTCGATCTCTACAAGAGATGCGGGCGGCTGGACGACCAAATCTCGCTGCTCAAGCACAAG
CTGCAGCTGATCAACCAGGGCCACGCCTTCAACGGCAAGCGGACCAAAACGGCTCGCTCT
CAGGGCCGCAAGTTCCAGGTCACCCTGGAGCAAGAAGCCACCAGGCTCCTTGGTAACCTG
GGGTGGGCGCTGATGCAGAAGGAGAACTACACGGAAGCGGAGGGAGCGTACCGTCGGGCG
CTGCTCATCGGGCCGGACAACAACAAGATGTGCAATCTGGGCATCTGCCTTATGAAGCAG
GCCCGCGTGCTCGAGGCCAAGGATGTGCTCAAGCAGGTACGCCCCGCGGCGGTTGATGGT
CTGCGCGGCGCCGACTCTCACCTCAAGGCCTACGAGCGAGCGCAGGAGATGCTGCGGGAC
CTCGAGACCAAGCTCATCGGCCGCCCGCCCGCTGACCAGCTCGACACGAACTGGCTCTTC
GATGCGCTGCTGCTGGGATCGTCCTCAAGCATCTGGCAGCCGCAGCCGTGCACCGATCAC
TTGCTGCCACCTCCTGTTCCGGCTCCAGCCACGGCGCCGCGCGGCCACTTCGCCGATGAA
AACGCCGGTGTGAGCAAGAAGCTGGCGGTGCTCCAGGAGAACATGCTTAATGTGGACGCG
CAGCCCTTCTACTCTTTGCGGGTGCCGTCGCTTGCAGCCAAGTCACATAACACGCTGCCT
CAGCGGCAACAGCAGCAGAAGCCAGCTCCTGTCCATGATCCCCTGGGCAACCTGAAGAGA
ACACGGTCCGGCAATTGCATGGACAAGGCAGGAGCAGTGGTGTTCAAGGAGCAGAGCATC
GACGAGAACAGCGGCAGGAGGAAGTCGCTGTCAGCTGAGGACAGGTGGCCAGAGCTACCC
GACCACAGCGCGTTCGATGAGGCCCTCGTCGCCGTCGTCCTGGCTCCAGTGCTCGACGAC
GAACCAACAGCTACTGAAGTCAAGCTGCCGGCGAGCTGCGACACGAGCCCAGCGGTGAAG
GAAAAGATCGGCAAGAGGCTGAGGATCTTCCAGGACATCACACAGACAGTGAACAGTTTC
TGATTCGTTTTGGTTTTCTTCAATTTCCTACTCACAAATTAATCAGGGAAGGAGAAAGGA
CTTGTTCTCCTGGGACCTAAATTAATCAGGGATTCGATTCGATTTTTAATTTGATGCTGA
TTTTAATTTAATTTATTAACACACAAAAATAACAGCTGATTCGCTTCTTCAGCTTGACAC
TTTAGAAGCGCGTGCTTCCTTTACCGCAAGATTCTCCTCGTAATAGAAGTTGCATCTTGT
TCTAATTTCATTTCTTTTGAAATAACAAAGTTCATTTGTGTA