Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022619_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:181212863:181216786:-1 gene:Zm00001d022619 gene_biotype:protein_coding transcript_biotype:protein_coding description:minichromosome maintenance 10
Sequence

ATGGCGAACGCCGCCGACGACCTGGACCTCCTGCTATCACTAGGCGAGGCCGTCCCGGAG
ACACCTCCCGCCTCCCCCCGCACCGCCGATGTCCCCGTGTGCGACGGCGCTTTCACACCA
CCAAGGACGGCGCCCCCCGGCGGCACCGACATGTCCGTTTTCCGCGACGCCGTCAAGGAT
TACCTCGAGGCGGCCCCCGAAACCACCTCCCCGCTTGCTAATCGCCCCAAGCGACCCAAG
GCCACCGAAATCCTCGTCGACAAATACTCCGGCCTCCGCATCAAGCACCTTACGCTCTCG
CCTCTTGAGATTAGCAACCGCTTCGCTGACATCCGATTTGTGCGCATCACCGCGTTAAAG
AACTCTGTGGGGAGCGACAGGTTCTCCGGCTGTTGGGCAACCGCGGGCGTGTTACTGGAC
AAGGGCGTGCAGCGGGTGAGTGCGAAGGGGAGCAGCTACAGCATCTGGAAGATGGGCGCT
CTGGACGAGACCGACGTATCTCTGTTCCTGTTTGGGGACGCGCACGTTCACTACTCCGGA
GCTGCTGTGGGTTCAGTGTTCGCTGTGTTCAATGGCAATGTCCGCATGGACAATGGGGGC
AAAGGGTTCTCTATGAGTGTTGCTTCTGTTGGACAGATGTTGAAGATGGGGGTCGCATCA
GATTTTGGTCTCTGCAAAGGCAAGAGGAAAGACGGGGTGGCTTGCACCATGGCTATAAAT
AAGAGTAAAGGATCATACTGCAAATTTCATTCGTCGAAAACATCACAAAAGTATACTACT
GGCAGAGTAGAGCTTAAGGGCGGAAATTTCAAATTTGCTTCCAAACTTCGATCTGAAGGG
ATTTACATGGTCAATCCTTCCTCAGAACGACCCAATCCAAGAAATTCTTTGCAACCGGTG
AAAGTAATGTCAATTGATGGGCTAAAAAGGGCTTTAAGCAATGCAGATAGAGTGACTAAT
AAGAACCAGTCCCAGGGTATAAGATTTCTTTCCCATGTTACAGCTAATATGGACAATATG
GTACCAAAAGCCCCAACCACCGGCTCTAGGAATCAACAGAGATCGAAGGCCGGCTTAAAC
AAAAGTTTGTCATCATCTGGCGCCAAAGCCTTGCCCAAGGAGGGATTGCGAAAACCACAA
CAGGATGTTAAAAGGCAAAAGATGAACAATCCTACAGAGAATATTGTTGAGCTTGATGCG
GTCAGCTCAGACGATGACGAGATAAATATAGTACTGCGACGCTGA

Peptide Sequence

PEP ID

Zm00001d022619_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:181212863:181216786:-1 gene:Zm00001d022619 transcript:Zm00001d022619_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:minichromosome maintenance 10
Sequence

MANAADDLDLLLSLGEAVPETPPASPRTADVPVCDGAFTPPRTAPPGGTDMSVFRDAVKD
YLEAAPETTSPLANRPKRPKATEILVDKYSGLRIKHLTLSPLEISNRFADIRFVRITALK
NSVGSDRFSGCWATAGVLLDKGVQRVSAKGSSYSIWKMGALDETDVSLFLFGDAHVHYSG
AAVGSVFAVFNGNVRMDNGGKGFSMSVASVGQMLKMGVASDFGLCKGKRKDGVACTMAIN
KSKGSYCKFHSSKTSQKYTTGRVELKGGNFKFASKLRSEGIYMVNPSSERPNPRNSLQPV
KVMSIDGLKRALSNADRVTNKNQSQGIRFLSHVTANMDNMVPKAPTTGSRNQQRSKAGLN
KSLSSSGAKALPKEGLRKPQQDVKRQKMNNPTENIVELDAVSSDDDEINIVLRR

Transcript Sequence

Transcript ID

Zm00001d022619_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:181212863:181216786:-1 gene:Zm00001d022619 gene_biotype:protein_coding transcript_biotype:protein_coding description:minichromosome maintenance 10
Sequence

ACAGTTTCCCTCGCATCCTCCTCCTACATCTATCTCCCACCTCGCACAATCACAGATTCC
TGATTCCTCAATCCTCAGTACCCCGCTGCCTGTCCTCCACGCACCTCACCGCAAACATGG
CGAACGCCGCCGACGACCTGGACCTCCTGCTATCACTAGGCGAGGCCGTCCCGGAGACAC
CTCCCGCCTCCCCCCGCACCGCCGATGTCCCCGTGTGCGACGGCGCTTTCACACCACCAA
GGACGGCGCCCCCCGGCGGCACCGACATGTCCGTTTTCCGCGACGCCGTCAAGGATTACC
TCGAGGCGGCCCCCGAAACCACCTCCCCGCTTGCTAATCGCCCCAAGCGACCCAAGGCCA
CCGAAATCCTCGTCGACAAATACTCCGGCCTCCGCATCAAGCACCTTACGCTCTCGCCTC
TTGAGATTAGCAACCGCTTCGCTGACATCCGATTTGTGCGCATCACCGCGTTAAAGAACT
CTGTGGGGAGCGACAGGTTCTCCGGCTGTTGGGCAACCGCGGGCGTGTTACTGGACAAGG
GCGTGCAGCGGGTGAGTGCGAAGGGGAGCAGCTACAGCATCTGGAAGATGGGCGCTCTGG
ACGAGACCGACGTATCTCTGTTCCTGTTTGGGGACGCGCACGTTCACTACTCCGGAGCTG
CTGTGGGTTCAGTGTTCGCTGTGTTCAATGGCAATGTCCGCATGGACAATGGGGGCAAAG
GGTTCTCTATGAGTGTTGCTTCTGTTGGACAGATGTTGAAGATGGGGGTCGCATCAGATT
TTGGTCTCTGCAAAGGCAAGAGGAAAGACGGGGTGGCTTGCACCATGGCTATAAATAAGA
GTAAAGGATCATACTGCAAATTTCATTCGTCGAAAACATCACAAAAGTATACTACTGGCA
GAGTAGAGCTTAAGGGCGGAAATTTCAAATTTGCTTCCAAACTTCGATCTGAAGGGATTT
ACATGGTCAATCCTTCCTCAGAACGACCCAATCCAAGAAATTCTTTGCAACCGGTGAAAG
TAATGTCAATTGATGGGCTAAAAAGGGCTTTAAGCAATGCAGATAGAGTGACTAATAAGA
ACCAGTCCCAGGGTATAAGATTTCTTTCCCATGTTACAGCTAATATGGACAATATGGTAC
CAAAAGCCCCAACCACCGGCTCTAGGAATCAACAGAGATCGAAGGCCGGCTTAAACAAAA
GTTTGTCATCATCTGGCGCCAAAGCCTTGCCCAAGGAGGGATTGCGAAAACCACAACAGG
ATGTTAAAAGGCAAAAGATGAACAATCCTACAGAGAATATTGTTGAGCTTGATGCGGTCA
GCTCAGACGATGACGAGATAAATATAGTACTGCGACGCTGATGCTTCATCAATAATAGCG
TGACATGTAATTGTACTCCAAATCGGCTAAACAATTGTACGCTCTTGTTTTCATATATCC
CAAGTCATCCGAGGCAGAAAAATTAAATCAGATATATTTGTTGACTTATGGATCAGGTTG
GTCCGTAGTGTTCTATTTTCTCTTGACATGCAGTTTAACAATTAGATATAAACATATATT
TTTAATATTTTTATAGAAGAGAGAAGTCAGCCCTTGATCAAAAGTTA