Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022586_T033
CDS Infomation

cds chromosome:B73_RefGen_v4:7:180353737:180372410:1 gene:Zm00001d022586 gene_biotype:protein_coding transcript_biotype:protein_coding description:HEAT repeat-containing protein
Sequence

ATGGAGAGAAGCACTGACGGTAGTAACAAGCGTAGTCTGGCTGAAGACATGAATCATGTG
ACAGAGGATGATGTCCACTCCACTAAAAGAGCCAGGCAATCAATTGATGCTAATGAACAT
AGTGAAGAGGCAAACAAGACAAATTTTGAGTCGATGTCTGTTGATATCTCATCTAGCCAG
CCCAGCTCTATAAGAACTGGGAATTCAGAAGCTGTGTATCAATTAATTGGTATGTTTGCT
GCACTAGCTGCACAAGGTGACAGAGCAGCTGGATCACTGCAAATCCTTTCATACAGTATC
GCTAGTGACTTACTAGCGGAGGTGGTAATGGTTAACATGCAACATCTCCCAATCTCTCGT
CCTGAAGTTGACCAACAGCAGCTTCCTTCTACGAGCTCTGGAGATGGACTTCCACTTTCA
AGTTTCTCCTCTCTGCTGGGGATTCTGCTGAAGGGAGCGAACCAAATTGATCAAGATGAA
GTGTCTCCAGCTAAAGAACCTGCGCTGGTGTCGTCAGTTGCAGATGACAGAATGATACTT
CCTGCTAATTCACCTGTTCCTAGCTCAGTAAATCTACCTATCGAAGAGAACAGTAACAGT
CCAACAGTTCCATTATGTATAGAAACAACAGAGGCCAAAGTAACCAGTGCAGGTGGCAAT
AGTTCGATTGATATTCCAGAATCATCAGAAGCTTCCCATGCCTCAACAGAGCCCCAGGGA
ACCCAAGAGCATGCTAGCACTTTTGCCGGTCCATTTCCTGCTGATAATTTCTCAGTTGGA
TTTAGTTTGGCACAATCGTCAGAAACTCGCAGCCCAAGCTCTTCTACATTGGAAGCAAAC
CACTCACAGCTTTCATCCCTTAGTTCACAATATGTTCTTCCAAAGTTGGTTGTCAATAAT
ATTGATCTCAGTGATGAGGCCAAAGATCTCCTTCAAAAAGAGGCGTTTGTGCGGATTCTT
GAGAGTGATAAGAAAGAAGCATCTGGTGGTTCAATTGCTCGCCTTCCGTTGCTTGCTCAC
CTGGGTGTTGAGTTTCCTCTGGAATTTGATCCTTGGGTGATTCTTCAAAAGCACATTCTC
TCTGATTATGCGAATAATGAGGGGCACGAGTTGACTATATGCATCCTGAACCGGCTATAT
CATGAGGCAGAGCAGGATCACGATTTCCTTTCATCTAGAACTGCTACATCAGTTTACGAA
TCCTTTCTTCTAAACATAGCTGAAAATCTTCGAGACATGTTTCCAGCTTCAGATAAGTCA
CTTGGCAAATTGCTTTGTGAGATACCATACTTACCAGAAGGTGTGCTGAAACTGCTTGAA
AGTTTATGTTCTCCTGGAAGTAATGAGAGGCAGGACAAGGATATTCAGAGTGGTGATAGG
GTAACTCAAGGTCTCAGTGCTGTCTGGAACCTTATCATGCTAAGACCTTCAAATCGGGAC
AGATGTCTGGAGATTGCTTTGCAGAGTTCAACTCATCATCTAGAGGAGGTCCGCATGAAG
GCAATACGTTTGGTGGCAAATAAGTTATTTCCTATGACAAGCATTTCCAAAAAGATTGAA
GATTTTGCAAATGAAAAACTTAATTCAGTGCTGGAAATGACTCCATCTGGTGATTGTGTA
ACTACTGAAATGGCTACACCTGAAGCACACAAAGATATTGGTTTAGAAAACTTAACAGCT
TCAGTAACAGGCATGCAGACTCTGATGTCTCTATACTTTGCATTGTGCACCAAGAAACAT
TCCCTTCTCAGACATGTATTTGCAATATATGGTAATCTACCGCAAGCTGCCAAGCAGGCA
GTTCATCAACAAGTACCAATTCTGATACGCACTATAGGCTCCTCCTCTGATCTTCTTGGA
ATCATCTCAGATCCACCAGCTGACTGCCGGGACCTCCTCATGCAGGTTTTACAAACCCTC
ACTGATGCTGCGGTTCCATCTAAAGATCTGATTTCTTCCATAAAGATCTTATATTCTAAA
ACAAAGGATGTTGAGTTCCTTTTTGCAATCTTGGTTCATCTACCAAAAGATGAGGTTTTC
TCCACCTCCCTCTACATAGCCGATAATCTCTCCAATTCAAAAAAAAACTCGGCCGGGAGG
GAAAGACCACCTCCTGGTATTATATTAAGAAGAGACCGAAACAATTGTTCCGATCGAGAA
AATCCTTGA

Peptide Sequence

PEP ID

Zm00001d022586_P033
PEP Infomation

pep chromosome:B73_RefGen_v4:7:180353737:180372410:1 gene:Zm00001d022586 transcript:Zm00001d022586_T033 gene_biotype:protein_coding transcript_biotype:protein_coding description:HEAT repeat-containing protein
Sequence

MERSTDGSNKRSLAEDMNHVTEDDVHSTKRARQSIDANEHSEEANKTNFESMSVDISSSQ
PSSIRTGNSEAVYQLIGMFAALAAQGDRAAGSLQILSYSIASDLLAEVVMVNMQHLPISR
PEVDQQQLPSTSSGDGLPLSSFSSLLGILLKGANQIDQDEVSPAKEPALVSSVADDRMIL
PANSPVPSSVNLPIEENSNSPTVPLCIETTEAKVTSAGGNSSIDIPESSEASHASTEPQG
TQEHASTFAGPFPADNFSVGFSLAQSSETRSPSSSTLEANHSQLSSLSSQYVLPKLVVNN
IDLSDEAKDLLQKEAFVRILESDKKEASGGSIARLPLLAHLGVEFPLEFDPWVILQKHIL
SDYANNEGHELTICILNRLYHEAEQDHDFLSSRTATSVYESFLLNIAENLRDMFPASDKS
LGKLLCEIPYLPEGVLKLLESLCSPGSNERQDKDIQSGDRVTQGLSAVWNLIMLRPSNRD
RCLEIALQSSTHHLEEVRMKAIRLVANKLFPMTSISKKIEDFANEKLNSVLEMTPSGDCV
TTEMATPEAHKDIGLENLTASVTGMQTLMSLYFALCTKKHSLLRHVFAIYGNLPQAAKQA
VHQQVPILIRTIGSSSDLLGIISDPPADCRDLLMQVLQTLTDAAVPSKDLISSIKILYSK
TKDVEFLFAILVHLPKDEVFSTSLYIADNLSNSKKNSAGRERPPPGIILRRDRNNCSDRE
NP

Transcript Sequence

Transcript ID

Zm00001d022586_T033
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:180353737:180372410:1 gene:Zm00001d022586 gene_biotype:protein_coding transcript_biotype:protein_coding description:HEAT repeat-containing protein
Sequence

CAGCAAGTTCTATTATTAAATTGAGAGTCCCGGGCGCATTCCATGCCTTGAAGAGTGCCT
TCTCTGCATGCCTGAAATGCACACATTCAAGTGCTGAGCCGTGGCGAGCACGCCTATTGG
AAGCTCAAAATATTATCAACCAAGGGGGTTCAATAGAAGATGCAGCAAATGCTGCTAAGA
ATTTCGGGGACACTTCAAACAGGGAAGAATCGTGGCCTCTGATGGAGAGAAGCACTGACG
GTAGTAACAAGCGTAGTCTGGCTGAAGACATGAATCATGTGACAGAGGATGATGTCCACT
CCACTAAAAGAGCCAGGCAATCAATTGATGCTAATGAACATAGTGAAGAGGCAAACAAGA
CAAATTTTGAGTCGATGTCTGTTGATATCTCATCTAGCCAGCCCAGCTCTATAAGAACTG
GGAATTCAGAAGCTGTGTATCAATTAATTGGTATGTTTGCTGCACTAGCTGCACAAGGTG
ACAGAGCAGCTGGATCACTGCAAATCCTTTCATACAGTATCGCTAGTGACTTACTAGCGG
AGGTGGTAATGGTTAACATGCAACATCTCCCAATCTCTCGTCCTGAAGTTGACCAACAGC
AGCTTCCTTCTACGAGCTCTGGAGATGGACTTCCACTTTCAAGTTTCTCCTCTCTGCTGG
GGATTCTGCTGAAGGGAGCGAACCAAATTGATCAAGATGAAGTGTCTCCAGCTAAAGAAC
CTGCGCTGGTGTCGTCAGTTGCAGATGACAGAATGATACTTCCTGCTAATTCACCTGTTC
CTAGCTCAGTAAATCTACCTATCGAAGAGAACAGTAACAGTCCAACAGTTCCATTATGTA
TAGAAACAACAGAGGCCAAAGTAACCAGTGCAGGTGGCAATAGTTCGATTGATATTCCAG
AATCATCAGAAGCTTCCCATGCCTCAACAGAGCCCCAGGGAACCCAAGAGCATGCTAGCA
CTTTTGCCGGTCCATTTCCTGCTGATAATTTCTCAGTTGGATTTAGTTTGGCACAATCGT
CAGAAACTCGCAGCCCAAGCTCTTCTACATTGGAAGCAAACCACTCACAGCTTTCATCCC
TTAGTTCACAATATGTTCTTCCAAAGTTGGTTGTCAATAATATTGATCTCAGTGATGAGG
CCAAAGATCTCCTTCAAAAAGAGGCGTTTGTGCGGATTCTTGAGAGTGATAAGAAAGAAG
CATCTGGTGGTTCAATTGCTCGCCTTCCGTTGCTTGCTCACCTGGGTGTTGAGTTTCCTC
TGGAATTTGATCCTTGGGTGATTCTTCAAAAGCACATTCTCTCTGATTATGCGAATAATG
AGGGGCACGAGTTGACTATATGCATCCTGAACCGGCTATATCATGAGGCAGAGCAGGATC
ACGATTTCCTTTCATCTAGAACTGCTACATCAGTTTACGAATCCTTTCTTCTAAACATAG
CTGAAAATCTTCGAGACATGTTTCCAGCTTCAGATAAGTCACTTGGCAAATTGCTTTGTG
AGATACCATACTTACCAGAAGGTGTGCTGAAACTGCTTGAAAGTTTATGTTCTCCTGGAA
GTAATGAGAGGCAGGACAAGGATATTCAGAGTGGTGATAGGGTAACTCAAGGTCTCAGTG
CTGTCTGGAACCTTATCATGCTAAGACCTTCAAATCGGGACAGATGTCTGGAGATTGCTT
TGCAGAGTTCAACTCATCATCTAGAGGAGGTCCGCATGAAGGCAATACGTTTGGTGGCAA
ATAAGTTATTTCCTATGACAAGCATTTCCAAAAAGATTGAAGATTTTGCAAATGAAAAAC
TTAATTCAGTGCTGGAAATGACTCCATCTGGTGATTGTGTAACTACTGAAATGGCTACAC
CTGAAGCACACAAAGATATTGGTTTAGAAAACTTAACAGCTTCAGTAACAGGCATGCAGA
CTCTGATGTCTCTATACTTTGCATTGTGCACCAAGAAACATTCCCTTCTCAGACATGTAT
TTGCAATATATGGTAATCTACCGCAAGCTGCCAAGCAGGCAGTTCATCAACAAGTACCAA
TTCTGATACGCACTATAGGCTCCTCCTCTGATCTTCTTGGAATCATCTCAGATCCACCAG
CTGACTGCCGGGACCTCCTCATGCAGGTTTTACAAACCCTCACTGATGCTGCGGTTCCAT
CTAAAGATCTGATTTCTTCCATAAAGATCTTATATTCTAAAACAAAGGATGTTGAGTTCC
TTTTTGCAATCTTGGTTCATCTACCAAAAGATGAGGTTTTCTCCACCTCCCTCTACATAG
CCGATAATCTCTCCAATTCAAAAAAAAACTCGGCCGGGAGGGAAAGACCACCTCCTGGTA
TTATATTAAGAAGAGACCGAAACAATTGTTCCGATCGAGAAAATCCTTGAACCCTGGGCC
CTCATCACTAACGGGCTGGCGTCAACCGTTCACTCTGCAACAACCCAACCAGAGGGTGGT
GCATAGGACATCGTAACCTGAGAGCGAATGGGGCACAACGAGGGAATTTTTTAAAATTCG
CCTTCGAGGGGGGATCAAACCTAGGACTTGGAGATGCTACTCGAAAGCCTTTAACCACTA
GGCTAGAAGCCCTTTCGCACTCTCTCCGATTCAGAAACATGCTATTTTAGGATTCCTGCC
AGTTAAACTTTTGTTTTAACATTGGCCAAAATAATTACATTGATCGTCAATGTAAGATCA
TAGATGTTACTAGATTCACCATAAAAACTATTTTAGAAATATTTAATTATCTTCGTTTTT
ATATGCTATATTTTTATCAAAGTTTTACCTTGTAGGCTGTCGATGTCCTAAACTATATTT
ATTTTCTATGGAAGGGAGTGATTAGCATTATTCTATTATGCTTCTAGACAGTGTCTTATG
CTTTCGTAGTCTTCTGCTGACACCCTTTGCCCATTGCACTGCCAATTATTTGCTCTGTGT
TCTGCACATACCCGACATATCTGGTAAACTGCTCACTTTTTATTCCACTGAAATTGGCAC
CCTATTGTAAATGTTTTGGCTTTCAATTTGATTGACAAAATACCATGGTACCAGGCCAGT
AGCCTGGATGTGATATTTTTCTCAGGACCAGTGTTATGAACCTTGAACTGACTTTTGGCT
TTACTGGAATAATTATATATTTTAAGCACTATTGTGGACTGTTTCTTATATTTGCCTTTA
GTTACACACTAGTTATGTGCATTAAACATTATCCTTTGCTCTTCAGGTCCTGCCTGTGTT
CCCCAGTATTGTTAATCTTCCAATAGACAAGTTTCAAAGTGCCATTTCCCGAATCTTGCA
GGGATCACCTCGGAATGGCCCTTCACTTGATCCATCAGAAATTTTAATTGCAATTCATGT
AATAGCTCCTGATAAGGAAGGAATACCACTCAAAAAGGTTATGGATGCATGCTCTTCTTG
CTTTGAGCAAAGAACAATATTTACCCAGCAAGTTCTGGCAAAAGCACTAAATCAACTGGT
TGAACAGATTCCTCTTCCTTTGCTATTCATGAGGACTGTCATGCAAGCAATAGGTGTTTT
TCCTGCATTGGTGGATTTTGTGATGGAGATCATGTCACGCCTTGTGAGCAAGCAGATTTG
GAAATATCCCAAGTTATGGGTAGGATTTCTGAAGTGTGCTATCTTGACAAAACCTCAGTC
ATATGGTGTGTTGCTGCAGTTACCAGCTCCTCAACTTGAGAATGCCTTGAGTAAGAACCC
GACACTGAAGACGCCCTTGGCTGAGCATGCCGAGCAGCCAAATATTCGGTCGACACTTCC
AAGGTCTACTTTGGTGGTTCTGGGTCTTGCTGAAGATCAACCACAGCAACCAGCAGTAAC
ACAGGTGCAGAGCAGCCAAAACCAGGCTGCGGAAACCAGTAGCTCTGCTGCTGATACGGC
TACAGAAGTAACTCAGGAATCTTCTGGTGCTAGCTAACATCTTTTATGCCGAAATGGGCT
AATGCTTGCAGAATCAAATACAGGATTGGCTGGATGGCAGAGTAGATACTTCAGATAATG
AAGCCGGTGAAGTTCTTAAAGAAAGGTCAATGAGTCGATGAAAGTGGGTTCAATATAGGC
CAATTTGATGAACACAGGCATTGAATTATACTAGATTAGGCTGCTGAATAGCGTAATACC
TACATCCATTTAGGTGTGTTTTCTTGTTAGCGTGCTATTGTAATGTCTATATTGTAATGG
GTCTCGACCCACCAAACTTTGTTAT