Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d022564_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:180078570:180085192:-1 gene:Zm00001d022564 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCT domain-containing protein
Sequence	ATGCCCCCGCACGGCCCCGAAGAAGACGCCGCCGACGCGCACCTCTTCGCTGGCGTCCGC TTCGCGCTCCACGGCTTCGACCAGATCTCCGCGTCCCAGTTTCGGTTGGAGATAGAGCGG TGCGGCGGCGTCCACGCGGGAGGTTGGGACGCAGACTGCACCCACGTTATAGTTTCCAAC ACCTTATATGATGATCCAGTGTGTGTGGCGGCGAGGAAGGCCGGGAAGAAGGTCGTCGTT GATCAGTGGGTGGAAGACAGCTTTGATCTCGGAGAATTGGCAGATGCAGATCGGGTGCTA TATGCTCCAGTCAGAGATTTTAAAGGCATTCCAGGTTGCGATAAACTTCACATTTGTTTG ACAGGGTACCAGAAGAATTGGCGCGACGACATAATGAAAATGGTTTCTTTGATGGGAGCA AACTTCTCCAAGTCTCTGGCAGCAAACATAATTACCCATCTCATTTGCTACAAATTTGAA GGTGAGAAATACGAACTTGCTAAAAGGGTGAATATAAAGCTTGTCAATCACCGGTGGCTG GAAGAATGCTTAAAGGCTTGGGAAATCCTTCCGGTCGACCATTATACGAAAAGTGGTTGG GAAGTAGAGATAATGGGAGCTCAAGCTAAGGACTCTGAAGATGAAACAGAATATGCTGGT ACATGCTCATTAAGTAGCAGACGTATTGACAGAAGGACCCCTATTAGAGAGATCAGCACA AAATCTCATGTTGACTCTGCTCTACATGCACCCAGTGGAGGTCCTACTGTCTCTGCTAGC AATGTAGTGGGTGCTACTGGAAAACACTTGAGCACTCCAGAGCAGTTTATGAAAGCACAC GATGCGAGCACAAAATCATCTGACATTAGAACTGACTCAGGAACTGCCCCTGACACAAAG TGTGCTGCAATGTCTGTTGATAATGATACTCTTAAACCTACCCGCTCTCACATTTACCAC AATGAGAATGATGAGGTTCCTGCAGATAAGGCCAGTAGGGATGAAGCTAAAGATGATCAC AGAAGGGAACTTGACACCAGGGATAGTACCCTTCGTACTCCCAGTGTACATAAAAGCATT GCACCCACTATTCCAGGAGACAATATAGAGAACACTAACAGGAATTGTTTCCATGGTTTC AGTCAGATCAATGTCAACAGTGATCTTCAGTTAAACTCTTCTGAAGAAAATTTCTCCAAG AAAATATTACACTCAACAAACTTGAGCAGAAAGGTAGACCAGAAGGATGACGGGCATGTA CCTGATCCCAAACCCAACATTTCTCAGTCATCAGTTGAAGAAAACCTAAACATGTGTGAG TTTAATCCAAGATCAGAAGGCAATTCAGCATCAAGAAATGATCAACCCTTAGGCTATTCA AGAAGGCGATCTTCAAAGTCAGGATCACTTAATGTTCATAGGAAGAAAAGCATTCTTTCT TCAGTCAGTTCAAAGGCACCAAATGAAGCCCCAGACTCGGGAAGTGGAATATCAAGCGCA ACTGCTTCTGATGTGGGTAGAAGCCCCACCGAACCTACCAAAGTTGATGGTCATGTAAAC AGTGGTCCAACTATGAATTCAACAGAGAACCAGATGTCCGGTTGTAAAAGCAACCTGTTA AGTTATAGGAGAACATCTTTGAAGCTTGTAAGCTCTGCTGAAGTAGAAAAGCTTCCTGAA AATTCTGTTAATGATAAGAACATGGTGGAGCCAGATGTAGTAAAGACACCAGCACTGCAC GAGGCAACAACTGAGGAGCCTTCCCCTTCCGTCTGTTCTGAAGTTAGAAAAGAAAGTTTA GGTGTTCATCAGAATAGGGACGCTGAAATGACTGATGCTCAGCTGCTAAGCAAAACTGAA GATGCAGCTCCTTGCTCAAAACCTGATAAAGTGGTTTCTTGTCAGAACTCGGGACTAGAA GGTTGTAAAGATGTCCCAGTTAACAAGATCACTGATGAACATGGAATATTTCCCTCGAAA ATATCAACTTCTAGAGTGAAGAAGGTTGGTGCCAAGCGGTCTCGCAATGCCGGCAGTAAA GCTGCTAGTGAATTTACAAATAGTAGAAGTGAGGTTGCAGCTTTGAAGCCTAAGCATGAT AAAGTTGCTTCTCATGAAAACGTGGAGGCACAACAGGGAGAAGGATGTTGTAGTCCAAAT GCTGCTGAATGTACACCACCATCTCCTGCAGAAGCCCTGAACAACAAATCAACGAATGAA GTTCTAACCAGCTCCCAGGGCCCCAATCATAAGACAAACGAATCACTAGTGGCTTCCAAG GCGGAGTCTGTTAATATGACTCTGCAAAGAAACAAGAAGGGGAACCGCAGAAAGCTTCCA AACACTTCAAATGCAGATGAAAATCAAAGAAGTTCATCTCGGACAGTACCAAATTCCAAA TCAGGTAATTTGGTTGCAAAGGGGTCTCGGACTGCTGATTTCAATATATCTGACTCACCA ACTGTCGATGAAACTGAGACAGTGCCATCAAATTCGAGTTTTAATGAGGCAGTTCCTCCA GGAAATGGTGAAGAAAAACATAAAAGGCTTTCAAGCAGTGCAAACGCAGATGACCCTGAA GCATGTACAGCAAATAAAGTACCAAACAATAGAGTCCGTAAGGTCGTAGCCAAGAGGAAG CTATCTGATGTCCAAAGCCACAAATCTGGTAGTGAGCCTTGCAAGACTGCGAAGGTATTG GTATCTGAAGTTAAAGTTGTGTCACCAGCCAGAGTTGCGCAGAGTTCTAGAAATGCTAAC AAGGTAACAGTGGTTCAAGACCTGCAGAACACCAATACTGGTAGGACGAACGATACAGTT GGATCATTTTGCAAAGATGTCACGGAAGACTGCTCAAAAGACATGCAGAGCTCTAAAACT AGAAGCAGCAGGAGACAAAAGATTGCAGATCTAGTGGATGGTTCAACGGACCATGACAAG GAGAACATACTAGTCGATAGTAATTTTACTTCCAATACAAAACGTGGAAATAACAGCATG AGTTCCAAATCCAACACAAAGACATTACAAAGTAGCAAAGCTGTGCTTGATGAGAGTAGT GTGATCAAAAGGAATGGTTATGGAACCTTGGATGTGCCAGAACCAACATGGTTTATTCTA AGTGGACATCGCCTGCTGAGAAAAGAGTATAGGGCTATACTTAGACGTTTGAGAGGTAGA GTTTGCAGGGATTCACATCACTGGTCTTTCCAAGCAACACACCTTGTCACCACTGAGATG CGCAGAACTGAAAAATTCTTCGCAGCTGCTGCGGCTGGCAGGTGGATACTGAAGCCTGAT TACTTGACTGCTAGCAATGAGGCTGGCAAGTTCTTAGAGGAAGAGCCATTTGAGTGGCAC GGTGAAGGCCTTAATATCGGTGATACGATCAGCTTGGATGCTCCAAGGAAGTGGCGCCAG CTGCGGCAGCGTACTGGCTATGGCGCTTTCTATGGGATGCAGGTCATCATATATGGGGAA TGCATTGCTCCAACACTGGACACGTTAAAACGCGCGATCAGGTGTGGTGATGGCACCATC TTAGCAACCTCCCCACCTTACACCCGGTTCTTTAAGTCCAGTGTTGACTTCGCTGTTGTA TCCGCGGGCATGCCAAGCGCGGACGCGTGGGTGCAGGAATTCATGCGGCATAGCATCCCC TGCATCAGCGCAGATTACCTGGTGGAGTACGTGTGCAAGCCCGGGCACCCCTTGGGCAAG CACGTCCTCTTCAACATGCACGATCTGGCCGAGAGGTCCCTGCAGAAGCTCATGAAGAAC CAAGAAGATGCTCCCGGGAGCTGTTCCGCTTGTGGGTCAGACAACCGGGAAGTGCCGATG CTGGTGTGCGGCGGCGACGGGAGGAGCCAGTCTTCCGGCTGTGGGGTCCGGACGCATGCC GATTGCTGCAACCCTCCCGTGGAAGGCTGCGATGGTGGCGAGTGGCTGTGCGGTAGGTGC GACCAGCAGAAATCTGCAAAGAAGGCTAAGAAGACCGCTGCGAAACCGAGGGTGCTGAAA CAGAGATGA

Peptide Sequence

PEP ID	Zm00001d022564_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:180078570:180085192:-1 gene:Zm00001d022564 transcript:Zm00001d022564_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCT domain-containing protein
Sequence	MPPHGPEEDAADAHLFAGVRFALHGFDQISASQFRLEIERCGGVHAGGWDADCTHVIVSN TLYDDPVCVAARKAGKKVVVDQWVEDSFDLGELADADRVLYAPVRDFKGIPGCDKLHICL TGYQKNWRDDIMKMVSLMGANFSKSLAANIITHLICYKFEGEKYELAKRVNIKLVNHRWL EECLKAWEILPVDHYTKSGWEVEIMGAQAKDSEDETEYAGTCSLSSRRIDRRTPIREIST KSHVDSALHAPSGGPTVSASNVVGATGKHLSTPEQFMKAHDASTKSSDIRTDSGTAPDTK CAAMSVDNDTLKPTRSHIYHNENDEVPADKASRDEAKDDHRRELDTRDSTLRTPSVHKSI APTIPGDNIENTNRNCFHGFSQINVNSDLQLNSSEENFSKKILHSTNLSRKVDQKDDGHV PDPKPNISQSSVEENLNMCEFNPRSEGNSASRNDQPLGYSRRRSSKSGSLNVHRKKSILS SVSSKAPNEAPDSGSGISSATASDVGRSPTEPTKVDGHVNSGPTMNSTENQMSGCKSNLL SYRRTSLKLVSSAEVEKLPENSVNDKNMVEPDVVKTPALHEATTEEPSPSVCSEVRKESL GVHQNRDAEMTDAQLLSKTEDAAPCSKPDKVVSCQNSGLEGCKDVPVNKITDEHGIFPSK ISTSRVKKVGAKRSRNAGSKAASEFTNSRSEVAALKPKHDKVASHENVEAQQGEGCCSPN AAECTPPSPAEALNNKSTNEVLTSSQGPNHKTNESLVASKAESVNMTLQRNKKGNRRKLP NTSNADENQRSSSRTVPNSKSGNLVAKGSRTADFNISDSPTVDETETVPSNSSFNEAVPP GNGEEKHKRLSSSANADDPEACTANKVPNNRVRKVVAKRKLSDVQSHKSGSEPCKTAKVL VSEVKVVSPARVAQSSRNANKVTVVQDLQNTNTGRTNDTVGSFCKDVTEDCSKDMQSSKT RSSRRQKIADLVDGSTDHDKENILVDSNFTSNTKRGNNSMSSKSNTKTLQSSKAVLDESS VIKRNGYGTLDVPEPTWFILSGHRLLRKEYRAILRRLRGRVCRDSHHWSFQATHLVTTEM RRTEKFFAAAAAGRWILKPDYLTASNEAGKFLEEEPFEWHGEGLNIGDTISLDAPRKWRQ LRQRTGYGAFYGMQVIIYGECIAPTLDTLKRAIRCGDGTILATSPPYTRFFKSSVDFAVV SAGMPSADAWVQEFMRHSIPCISADYLVEYVCKPGHPLGKHVLFNMHDLAERSLQKLMKN QEDAPGSCSACGSDNREVPMLVCGGDGRSQSSGCGVRTHADCCNPPVEGCDGGEWLCGRC DQQKSAKKAKKTAAKPRVLKQR

Transcript Sequence

Transcript ID	Zm00001d022564_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:180078570:180085192:-1 gene:Zm00001d022564 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCT domain-containing protein
Sequence	GCGACTGGAGAGAGAAGACGCGCGCCGCGAAATCCAAAATTCCAAATCCCGGCCAGTTTC TAGCAGCAGTGTTTTCCCTCCCTCCCAAATTCCCACTCTCTCTCCTCCTCTCTCCCTCCA TTTTTCGAGACAATCCAATCACCCAGCGCCAGCGATCCCAAACAAACCCTAGCCACCAAT CTCCGCTCCGGCCTGCGCCCTCGCCATGCCCCCGCACGGCCCCGAAGAAGACGCCGCCGA CGCGCACCTCTTCGCTGGCGTCCGCTTCGCGCTCCACGGCTTCGACCAGATCTCCGCGTC CCAGTTTCGGTTGGAGATAGAGCGGTGCGGCGGCGTCCACGCGGGAGGTTGGGACGCAGA CTGCACCCACGTTATAGTTTCCAACACCTTATATGATGATCCAGTGTGTGTGGCGGCGAG GAAGGCCGGGAAGAAGGTCGTCGTTGATCAGTGGGTGGAAGACAGCTTTGATCTCGGAGA ATTGGCAGATGCAGATCGGGTGCTATATGCTCCAGTCAGAGATTTTAAAGGCATTCCAGG TTGCGATAAACTTCACATTTGTTTGACAGGGTACCAGAAGAATTGGCGCGACGACATAAT GAAAATGGTTTCTTTGATGGGAGCAAACTTCTCCAAGTCTCTGGCAGCAAACATAATTAC CCATCTCATTTGCTACAAATTTGAAGGTGAGAAATACGAACTTGCTAAAAGGGTGAATAT AAAGCTTGTCAATCACCGGTGGCTGGAAGAATGCTTAAAGGCTTGGGAAATCCTTCCGGT CGACCATTATACGAAAAGTGGTTGGGAAGTAGAGATAATGGGAGCTCAAGCTAAGGACTC TGAAGATGAAACAGAATATGCTGGTACATGCTCATTAAGTAGCAGACGTATTGACAGAAG GACCCCTATTAGAGAGATCAGCACAAAATCTCATGTTGACTCTGCTCTACATGCACCCAG TGGAGGTCCTACTGTCTCTGCTAGCAATGTAGTGGGTGCTACTGGAAAACACTTGAGCAC TCCAGAGCAGTTTATGAAAGCACACGATGCGAGCACAAAATCATCTGACATTAGAACTGA CTCAGGAACTGCCCCTGACACAAAGTGTGCTGCAATGTCTGTTGATAATGATACTCTTAA ACCTACCCGCTCTCACATTTACCACAATGAGAATGATGAGGTTCCTGCAGATAAGGCCAG TAGGGATGAAGCTAAAGATGATCACAGAAGGGAACTTGACACCAGGGATAGTACCCTTCG TACTCCCAGTGTACATAAAAGCATTGCACCCACTATTCCAGGAGACAATATAGAGAACAC TAACAGGAATTGTTTCCATGGTTTCAGTCAGATCAATGTCAACAGTGATCTTCAGTTAAA CTCTTCTGAAGAAAATTTCTCCAAGAAAATATTACACTCAACAAACTTGAGCAGAAAGGT AGACCAGAAGGATGACGGGCATGTACCTGATCCCAAACCCAACATTTCTCAGTCATCAGT TGAAGAAAACCTAAACATGTGTGAGTTTAATCCAAGATCAGAAGGCAATTCAGCATCAAG AAATGATCAACCCTTAGGCTATTCAAGAAGGCGATCTTCAAAGTCAGGATCACTTAATGT TCATAGGAAGAAAAGCATTCTTTCTTCAGTCAGTTCAAAGGCACCAAATGAAGCCCCAGA CTCGGGAAGTGGAATATCAAGCGCAACTGCTTCTGATGTGGGTAGAAGCCCCACCGAACC TACCAAAGTTGATGGTCATGTAAACAGTGGTCCAACTATGAATTCAACAGAGAACCAGAT GTCCGGTTGTAAAAGCAACCTGTTAAGTTATAGGAGAACATCTTTGAAGCTTGTAAGCTC TGCTGAAGTAGAAAAGCTTCCTGAAAATTCTGTTAATGATAAGAACATGGTGGAGCCAGA TGTAGTAAAGACACCAGCACTGCACGAGGCAACAACTGAGGAGCCTTCCCCTTCCGTCTG TTCTGAAGTTAGAAAAGAAAGTTTAGGTGTTCATCAGAATAGGGACGCTGAAATGACTGA TGCTCAGCTGCTAAGCAAAACTGAAGATGCAGCTCCTTGCTCAAAACCTGATAAAGTGGT TTCTTGTCAGAACTCGGGACTAGAAGGTTGTAAAGATGTCCCAGTTAACAAGATCACTGA TGAACATGGAATATTTCCCTCGAAAATATCAACTTCTAGAGTGAAGAAGGTTGGTGCCAA GCGGTCTCGCAATGCCGGCAGTAAAGCTGCTAGTGAATTTACAAATAGTAGAAGTGAGGT TGCAGCTTTGAAGCCTAAGCATGATAAAGTTGCTTCTCATGAAAACGTGGAGGCACAACA GGGAGAAGGATGTTGTAGTCCAAATGCTGCTGAATGTACACCACCATCTCCTGCAGAAGC CCTGAACAACAAATCAACGAATGAAGTTCTAACCAGCTCCCAGGGCCCCAATCATAAGAC AAACGAATCACTAGTGGCTTCCAAGGCGGAGTCTGTTAATATGACTCTGCAAAGAAACAA GAAGGGGAACCGCAGAAAGCTTCCAAACACTTCAAATGCAGATGAAAATCAAAGAAGTTC ATCTCGGACAGTACCAAATTCCAAATCAGGTAATTTGGTTGCAAAGGGGTCTCGGACTGC TGATTTCAATATATCTGACTCACCAACTGTCGATGAAACTGAGACAGTGCCATCAAATTC GAGTTTTAATGAGGCAGTTCCTCCAGGAAATGGTGAAGAAAAACATAAAAGGCTTTCAAG CAGTGCAAACGCAGATGACCCTGAAGCATGTACAGCAAATAAAGTACCAAACAATAGAGT CCGTAAGGTCGTAGCCAAGAGGAAGCTATCTGATGTCCAAAGCCACAAATCTGGTAGTGA GCCTTGCAAGACTGCGAAGGTATTGGTATCTGAAGTTAAAGTTGTGTCACCAGCCAGAGT TGCGCAGAGTTCTAGAAATGCTAACAAGGTAACAGTGGTTCAAGACCTGCAGAACACCAA TACTGGTAGGACGAACGATACAGTTGGATCATTTTGCAAAGATGTCACGGAAGACTGCTC AAAAGACATGCAGAGCTCTAAAACTAGAAGCAGCAGGAGACAAAAGATTGCAGATCTAGT GGATGGTTCAACGGACCATGACAAGGAGAACATACTAGTCGATAGTAATTTTACTTCCAA TACAAAACGTGGAAATAACAGCATGAGTTCCAAATCCAACACAAAGACATTACAAAGTAG CAAAGCTGTGCTTGATGAGAGTAGTGTGATCAAAAGGAATGGTTATGGAACCTTGGATGT GCCAGAACCAACATGGTTTATTCTAAGTGGACATCGCCTGCTGAGAAAAGAGTATAGGGC TATACTTAGACGTTTGAGAGGTAGAGTTTGCAGGGATTCACATCACTGGTCTTTCCAAGC AACACACCTTGTCACCACTGAGATGCGCAGAACTGAAAAATTCTTCGCAGCTGCTGCGGC TGGCAGGTGGATACTGAAGCCTGATTACTTGACTGCTAGCAATGAGGCTGGCAAGTTCTT AGAGGAAGAGCCATTTGAGTGGCACGGTGAAGGCCTTAATATCGGTGATACGATCAGCTT GGATGCTCCAAGGAAGTGGCGCCAGCTGCGGCAGCGTACTGGCTATGGCGCTTTCTATGG GATGCAGGTCATCATATATGGGGAATGCATTGCTCCAACACTGGACACGTTAAAACGCGC GATCAGGTGTGGTGATGGCACCATCTTAGCAACCTCCCCACCTTACACCCGGTTCTTTAA GTCCAGTGTTGACTTCGCTGTTGTATCCGCGGGCATGCCAAGCGCGGACGCGTGGGTGCA GGAATTCATGCGGCATAGCATCCCCTGCATCAGCGCAGATTACCTGGTGGAGTACGTGTG CAAGCCCGGGCACCCCTTGGGCAAGCACGTCCTCTTCAACATGCACGATCTGGCCGAGAG GTCCCTGCAGAAGCTCATGAAGAACCAAGAAGATGCTCCCGGGAGCTGTTCCGCTTGTGG GTCAGACAACCGGGAAGTGCCGATGCTGGTGTGCGGCGGCGACGGGAGGAGCCAGTCTTC CGGCTGTGGGGTCCGGACGCATGCCGATTGCTGCAACCCTCCCGTGGAAGGCTGCGATGG TGGCGAGTGGCTGTGCGGTAGGTGCGACCAGCAGAAATCTGCAAAGAAGGCTAAGAAGAC CGCTGCGAAACCGAGGGTGCTGAAACAGAGATGATTCTGGTTTGGCCCGTACAAGCGATG CAAAAGGTCGTCTCCCAAGGTAACGACGAATGATGGCAGCGGGGGTGCTCTTGCTCTCTA CAAGTTGATGACAACTAGCTCGTTGCCTTTGGAAAGCACCCGTGCATGTGATCTGATGAA TGAAAACAAAGTGATGGGTGTAAACGTATAAGGACTTTAGACTGGTGCCAATAAATATTA CGTATTTATGTAAATGCACGGATCTGATGGAATGCTGTGATCAACTTGAACATATATGGT GCCCATCAATCTGGGCATTGGGCGCTGTCGAATGTCCGGTAAAGCGCGCTATTTCCGGAT CGTCCTTCATGGTTGTGTGCGTCCGAGTAAAGGCAATGGCCGTGCAAAAGTTTCTTCGAC GGATGGTTGCAGATGTTAGCAGTACAGAATGCTTTCCT