Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022510_T023
CDS Infomation

cds chromosome:B73_RefGen_v4:7:179105167:179113128:-1 gene:Zm00001d022510 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-alpha-glucanotransferase DPE2
Sequence

ATGGCGACCTCGGGAAAGAAACACCTGAATTCAGTGACCTTGCTGTTCAAACTACCGTAT
TACACGCAATGGGGCCAGAGCTTGCTGATTGCCGGGTCGGAACCAGCACTCGGGTCGTGG
AATGTCAAGCAAGGAGTATCTCTCAGTCCAGTCCATCAGGACAGTGAGCTAATCTGGTGT
GGGAGCGTGTCTGTTGTTGCCGGCTTTACCTCTGAGTACAAGTACTATGTGGTGGATGAC
AAGAAGAATGTGTTGAGATGGGAGGCTGGGGAGAAAAGGAAACTAGTCCTGCCGGAGGGC
GTGAAGGAAGGAGACGTAATTGAAATCCGTGACTGGTGGCAGGATGCTTCTGAAGCTCTA
TTCTTCAGAAGTGCATTCAAGAATGTCATTTTCAATGCTACTGAAGGTGTTAAAAAGGAA
TCACAGTCAGTGTCCCTCAACAAAAGTTTGGATCCTGAAGATATCGTTGTCCAGTTCGTG
ATTAGCTGTCCTCGGCTCGTATCTGGATCTACTGTCATCGTCACTGGAAGTAACCCTCAA
TTAGGAAGATGGCAAACTCAAGATGGTCTCAAGCTGAGCTATGTTGGAGATTCCTTGTGG
AAAGCAAGCTGTGCTTTACGGAAGTCTGAGTTCCCTATAAAATACAAATATTGTCAAATC
AGTCAAGCAGGAAACTCTACATTGGAGCTTGGCCCAAACAGGGAGGTTAATGTTGATTTA
TCATCACCCAAGCAATCCAGATATATTGTGTTATCTGATGGTGCTCTTAGGGATGCACCA
TGGAGGGGTGCAGGTGTTGCTGTACCCATGTTTTCAATCAGATCAGATGAGGACCTTGGC
GTTGGAGAATTTCTAGATCTTAAACTTCTTGTTGACTGGGCAGTCAATTCGGGCTTCCAT
CTTGTTCAGCTCCTTCCAATCAACGATACTTCAGTTCATGGGATGTGGTGGGATTCTTAT
CCGTACAGCTCCCTGTCTGTGTTTGCTTTGCATCCCTTGTACCTGAGGGTACAAGCACTT
TCAGATGCAATTCCTGTGGATGTTAAGGAAGAAATTCAGCAGGCGAAGAAGCAATTGGAT
AAAAAGGATGTCGACTACGAGGCAGCATTGTCCACAAAATTGTCGATTGCTAGAAAAATA
TTCAATTTAGAAAAGGAAAAAGTGCTAAACTCCAGTTCTTTCAAGCAGTTCTTATCTGAA
AACGAGGAATGGTTGAAACCATATGCGGCATTTTGCTTTTTGCGGGACTTTTTCGAGACA
TCTGATCACAGTCAATGGGGTCGTTTTTCTCAGTTTTCCAAGGATAAGCTTGACAAACTT
ATTTGTGAAGGTACTTTACACCATGACATTATACGTTTTCATTACTATGTTCAGTACCAT
CTATATATACAATTATCTGAGGCAGCAACATATGCAAGAAAGAAAAATGTTATCCTGAAA
GGTGATTTACCTATTGGTGTTGATAGGAATAGTGTCGATACATGGGTATACCCAACCTTG
TTTCGCATGAATACCGCTACTGGAGCGCCTCCTGATTATTTTGACAAGAATGGACAAAAT
TGGGGTTTTCCTACATATAACTGGGAGGAGATGTCAAAGGATAATTATGGGTGGTGGCGA
GCTCGTCTGACACAGATGGCAAAGTACTTCACAGCATACAGGATAGACCACATCTTGGGT
TTCTTTAGGATATGGGAGCTTCCAGATCATGCTGCAACAGGTTTAGTTGGGAAATTTAGA
CCTTCCATCCCTCTTAGTCAGGAGGAGCTTCTAAGTGAAGGTCTATGGGATTTTAATCGG
ATGAGCCAACCATACATTCGTCAGGAAATACTGGAGGAGAAGTTTGGATCCTTTTGGACA
GTCATTGCAGCCAATTTTCTAAATGAGTACCAGAAGCAGTGTTATGAGTTTAAAGAAGAT
TGCAACACAGAGAAAAAGATTATTGTAAAGATTAAAACAAGTGCTGAAAAGTCACTGTGG
GTAGAGAAAGAGGACAATATCCGCCGTGGCCTTTTCGATTTACTACAGAATATTGTCCTT
ATCAGAGATCCAGAGGACTCCACAAAATTCTATCCCCGTTTCAACCTGGAAGACACATCA
AGTTTTAGGGACCTTGATGAACACAGCAAAAATATCCTCAGAAGATTGTATTATAACTAT
TATTTTGTTCGCCAAGAAAATCTCTGGCGCCAAAATGCCCTGAAGACTTTGCCTGTCCTG
CTGAACTCGTCAGATATGTTAGCATGTGGAGAGGACCTTGGCCTTATCCCTGCTTGTGTT
CACCCTGTTATGCAAGAACTGGGGTTGATTGGATTGCGTATCCAAAGAATGCCTAGTGAA
CCAAACTTGGAATTTGGTATTCCTTCTCAGTATAGCTATATGACGGTTTGTGCTCCCTCA
TGTCATGACTGCTCTACATTACGTGCTTGGTGGGAAGAAGATGAAGGAAGAAGAAGTCGT
TTCTACAAGACTGTAGTTGGCAGTGATGAGGAGCCCCCATCTCGTTGCACCCCGGAAGTA
GTGCACTTCATTGTTCAGCAGCATTTTGACGCTCCATCAATGTGGGCAATCTTTCCACTT
CAGGACCTCCTTGCACTGAAAGACAAGTACACCACAAGACCAGCGCCAGAGGAAACAATC
AATGACCCCACTAACCCAAAGCACTATTGGAGATTCCGTGTCCACGTGACATTGGAGTCC
CTGCTGAACGACAAGGACATCCAGGCAACCATCAAGGACCTGGTCACAAGCAGTGGGAGG
TCCTTCCCCGGAAAGAAGGCGGAAGGTGCCGACGAGAGCGGGGAGAAGCTGTCCAAGGTG
CAGCTGAATGGTAAAGCTTAG

Peptide Sequence

PEP ID

Zm00001d022510_P023
PEP Infomation

pep chromosome:B73_RefGen_v4:7:179105167:179113128:-1 gene:Zm00001d022510 transcript:Zm00001d022510_T023 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-alpha-glucanotransferase DPE2
Sequence

MATSGKKHLNSVTLLFKLPYYTQWGQSLLIAGSEPALGSWNVKQGVSLSPVHQDSELIWC
GSVSVVAGFTSEYKYYVVDDKKNVLRWEAGEKRKLVLPEGVKEGDVIEIRDWWQDASEAL
FFRSAFKNVIFNATEGVKKESQSVSLNKSLDPEDIVVQFVISCPRLVSGSTVIVTGSNPQ
LGRWQTQDGLKLSYVGDSLWKASCALRKSEFPIKYKYCQISQAGNSTLELGPNREVNVDL
SSPKQSRYIVLSDGALRDAPWRGAGVAVPMFSIRSDEDLGVGEFLDLKLLVDWAVNSGFH
LVQLLPINDTSVHGMWWDSYPYSSLSVFALHPLYLRVQALSDAIPVDVKEEIQQAKKQLD
KKDVDYEAALSTKLSIARKIFNLEKEKVLNSSSFKQFLSENEEWLKPYAAFCFLRDFFET
SDHSQWGRFSQFSKDKLDKLICEGTLHHDIIRFHYYVQYHLYIQLSEAATYARKKNVILK
GDLPIGVDRNSVDTWVYPTLFRMNTATGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWR
ARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLVGKFRPSIPLSQEELLSEGLWDFNR
MSQPYIRQEILEEKFGSFWTVIAANFLNEYQKQCYEFKEDCNTEKKIIVKIKTSAEKSLW
VEKEDNIRRGLFDLLQNIVLIRDPEDSTKFYPRFNLEDTSSFRDLDEHSKNILRRLYYNY
YFVRQENLWRQNALKTLPVLLNSSDMLACGEDLGLIPACVHPVMQELGLIGLRIQRMPSE
PNLEFGIPSQYSYMTVCAPSCHDCSTLRAWWEEDEGRRSRFYKTVVGSDEEPPSRCTPEV
VHFIVQQHFDAPSMWAIFPLQDLLALKDKYTTRPAPEETINDPTNPKHYWRFRVHVTLES
LLNDKDIQATIKDLVTSSGRSFPGKKAEGADESGEKLSKVQLNGKA

Transcript Sequence

Transcript ID

Zm00001d022510_T023
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:179105167:179113128:-1 gene:Zm00001d022510 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-alpha-glucanotransferase DPE2
Sequence

GCTCCTTTTTTATGCTGTCACTGCGGTCGCGGGTGACGCTTTCCCAGGCTCTCCCACCGT
CGTAGACGTCGCCTTCGCCCTCCACACGCACACCCATCCGCTCCCCTCGCGTCGCCTTCT
ATCTTCGAGGGAGAGCCGGAGAGCCTTCGCCGCTCTCTCACTCGCTCTGTTTTGTACCTC
GCTCTGATCTCTCCCCCCGCCCGTCGCTGATTCCCTGCCCGTTTGTCGCCATTGCCGCCG
GTCGTGCCGTGTCAAGTTTGTACCTGAAGCTATGGCTGGGATTCATTCTTCAGTCGTACA
TCAACACATTCAGCTTCCTGATCTCGCTCTTCTCCCCTGTTCGATTTGAAGGACATGGCG
ACCTCGGGAAAGAAACACCTGAATTCAGTGACCTTGCTGTTCAAACTACCGTATTACACG
CAATGGGGCCAGAGCTTGCTGATTGCCGGGTCGGAACCAGCACTCGGGTCGTGGAATGTC
AAGCAAGGAGTATCTCTCAGTCCAGTCCATCAGGACAGTGAGCTAATCTGGTGTGGGAGC
GTGTCTGTTGTTGCCGGCTTTACCTCTGAGTACAAGTACTATGTGGTGGATGACAAGAAG
AATGTGTTGAGATGGGAGGCTGGGGAGAAAAGGAAACTAGTCCTGCCGGAGGGCGTGAAG
GAAGGAGACGTAATTGAAATCCGTGACTGGTGGCAGGATGCTTCTGAAGCTCTATTCTTC
AGAAGTGCATTCAAGAATGTCATTTTCAATGCTACTGAAGGTGTTAAAAAGGAATCACAG
TCAGTGTCCCTCAACAAAAGTTTGGATCCTGAAGATATCGTTGTCCAGTTCGTGATTAGC
TGTCCTCGGCTCGTATCTGGATCTACTGTCATCGTCACTGGAAGTAACCCTCAATTAGGA
AGATGGCAAACTCAAGATGGTCTCAAGCTGAGCTATGTTGGAGATTCCTTGTGGAAAGCA
AGCTGTGCTTTACGGAAGTCTGAGTTCCCTATAAAATACAAATATTGTCAAATCAGTCAA
GCAGGAAACTCTACATTGGAGCTTGGCCCAAACAGGGAGGTTAATGTTGATTTATCATCA
CCCAAGCAATCCAGATATATTGTGTTATCTGATGGTGCTCTTAGGGATGCACCATGGAGG
GGTGCAGGTGTTGCTGTACCCATGTTTTCAATCAGATCAGATGAGGACCTTGGCGTTGGA
GAATTTCTAGATCTTAAACTTCTTGTTGACTGGGCAGTCAATTCGGGCTTCCATCTTGTT
CAGCTCCTTCCAATCAACGATACTTCAGTTCATGGGATGTGGTGGGATTCTTATCCGTAC
AGCTCCCTGTCTGTGTTTGCTTTGCATCCCTTGTACCTGAGGGTACAAGCACTTTCAGAT
GCAATTCCTGTGGATGTTAAGGAAGAAATTCAGCAGGCGAAGAAGCAATTGGATAAAAAG
GATGTCGACTACGAGGCAGCATTGTCCACAAAATTGTCGATTGCTAGAAAAATATTCAAT
TTAGAAAAGGAAAAAGTGCTAAACTCCAGTTCTTTCAAGCAGTTCTTATCTGAAAACGAG
GAATGGTTGAAACCATATGCGGCATTTTGCTTTTTGCGGGACTTTTTCGAGACATCTGAT
CACAGTCAATGGGGTCGTTTTTCTCAGTTTTCCAAGGATAAGCTTGACAAACTTATTTGT
GAAGGTACTTTACACCATGACATTATACGTTTTCATTACTATGTTCAGTACCATCTATAT
ATACAATTATCTGAGGCAGCAACATATGCAAGAAAGAAAAATGTTATCCTGAAAGGTGAT
TTACCTATTGGTGTTGATAGGAATAGTGTCGATACATGGGTATACCCAACCTTGTTTCGC
ATGAATACCGCTACTGGAGCGCCTCCTGATTATTTTGACAAGAATGGACAAAATTGGGGT
TTTCCTACATATAACTGGGAGGAGATGTCAAAGGATAATTATGGGTGGTGGCGAGCTCGT
CTGACACAGATGGCAAAGTACTTCACAGCATACAGGATAGACCACATCTTGGGTTTCTTT
AGGATATGGGAGCTTCCAGATCATGCTGCAACAGGTTTAGTTGGGAAATTTAGACCTTCC
ATCCCTCTTAGTCAGGAGGAGCTTCTAAGTGAAGGTCTATGGGATTTTAATCGGATGAGC
CAACCATACATTCGTCAGGAAATACTGGAGGAGAAGTTTGGATCCTTTTGGACAGTCATT
GCAGCCAATTTTCTAAATGAGTACCAGAAGCAGTGTTATGAGTTTAAAGAAGATTGCAAC
ACAGAGAAAAAGATTATTGTAAAGATTAAAACAAGTGCTGAAAAGTCACTGTGGGTAGAG
AAAGAGGACAATATCCGCCGTGGCCTTTTCGATTTACTACAGAATATTGTCCTTATCAGA
GATCCAGAGGACTCCACAAAATTCTATCCCCGTTTCAACCTGGAAGACACATCAAGTTTT
AGGGACCTTGATGAACACAGCAAAAATATCCTCAGAAGATTGTATTATAACTATTATTTT
GTTCGCCAAGAAAATCTCTGGCGCCAAAATGCCCTGAAGACTTTGCCTGTCCTGCTGAAC
TCGTCAGATATGTTAGCATGTGGAGAGGACCTTGGCCTTATCCCTGCTTGTGTTCACCCT
GTTATGCAAGAACTGGGGTTGATTGGATTGCGTATCCAAAGAATGCCTAGTGAACCAAAC
TTGGAATTTGGTATTCCTTCTCAGTATAGCTATATGACGGTTTGTGCTCCCTCATGTCAT
GACTGCTCTACATTACGTGCTTGGTGGGAAGAAGATGAAGGAAGAAGAAGTCGTTTCTAC
AAGACTGTAGTTGGCAGTGATGAGGAGCCCCCATCTCGTTGCACCCCGGAAGTAGTGCAC
TTCATTGTTCAGCAGCATTTTGACGCTCCATCAATGTGGGCAATCTTTCCACTTCAGGAC
CTCCTTGCACTGAAAGACAAGTACACCACAAGACCAGCGCCAGAGGAAACAATCAATGAC
CCCACTAACCCAAAGCACTATTGGAGATTCCGTGTCCACGTGACATTGGAGTCCCTGCTG
AACGACAAGGACATCCAGGCAACCATCAAGGACCTGGTCACAAGCAGTGGGAGGTCCTTC
CCCGGAAAGAAGGCGGAAGGTGCCGACGAGAGCGGGGAGAAGCTGTCCAAGGTGCAGCTG
AATGGTAAAGCTTAGGAAAGGATTGCGAGAGCTGCTGGAAGTGACCACGGTTACAAGTAA
ATAAATAGAATAAGGCGACAGATTGCATCACCGTGTTGATCCAGGTGATGCTGTTTCTGG
TAGGAAATTCTTACCCATGTGATGTTCTTTCAACTCTGGAAATAAGAAGCACCCTCT