Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022501_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:7:178945596:178947713:1 gene:Zm00001d022501 gene_biotype:protein_coding transcript_biotype:protein_coding description:Inactive beta-amylase 9
Sequence

ATGCCTCTCCTTCGCCATCGACGACCTCCCCGTGCTCCACGGCAAGTCCCCGCTCCAGCT
CTACGAGGCCTTCTTCCGCAGCTTCGCCGTCGCATTCGACGACTTCTTCGACTCCACCAT
CACCGTAACGACGTGACGGTGGGGCTCGGCGCGAACGGCGTGCTCCGGTACCCGTCGTAC
CCGCCGGGGAGCGACGCCCGCAAGTTCACGGGGATGGGCGAGTTCCAGTGCTACGACAAG
TACATGCTGCAGCAGCTGAGGCAGCACGCCGCGGAGGAGGGCCACGCCAGGTGGGGGCTG
TCGGGCCCGCACGACGCGCCGCGGTACCACGACTCGCCGGACGCGTGCGGCTTCTTCCGG
GAGCGCGGCGGATCTTGGGAGACCCCCTACGGCGACTTCTTCCTGTCGTGGTACGCCGGG
CAGTTGGTGGGGCACGGCGACCGCGTCCTGGGCACGGCCAACGCCGTGTTCGGCGGCAAG
CCCGTGGCGCTGTCGGCCAAGATCCCGTTCATGCACTGGTGGCACGGGGTGCGGTCGCGC
CCTGCCGAGGCCGCCGCGGGCTTCTACAAGAGCAACAAGAAGAACGGGTACAGCCCCGTG
GCCAAGATGTTCGCGCGCCACGGCTGCACCATGGTGGTGCCCGGCATGGACGTGTGCATG
AACAAGCAGCACCACAGCACGGGCTCCAGCCCGGACACCCTGCTGGTGCAGATGAAGAAC
GCGTGCCGTCGCCACGGCGTGCGCATCGCCGGCGAGAACGCGTCGCTCGTCATGACGCAC
ACCAGCAGCTTCTCGCGCATCCGCAGCAACATCCTCACCACCGAGCTCATGCGGCCCTGC
CACTTCACGTACCTGCGCATGGGCGCCGAGTTCTTCTCCCCCGACCACTTCCCGCAGTTC
ATGGAGTTCGTGCGAAGCGTCGTGTGCGGCGAGTGGGACGAGGACGACGGCCCCGCCGAC
GAGGAGCGTGGCATGACTGTGTCAGGCAATACCAGATCCAGGGAGGCCAAGGCGGTTTGA

Peptide Sequence

PEP ID

Zm00001d022501_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:7:178945596:178947713:1 gene:Zm00001d022501 transcript:Zm00001d022501_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Inactive beta-amylase 9
Sequence

MPLLRHRRPPRAPRQVPAPALRGLLPQLRRRIRRLLRLHHHRNDVTVGLGANGVLRYPSY
PPGSDARKFTGMGEFQCYDKYMLQQLRQHAAEEGHARWGLSGPHDAPRYHDSPDACGFFR
ERGGSWETPYGDFFLSWYAGQLVGHGDRVLGTANAVFGGKPVALSAKIPFMHWWHGVRSR
PAEAAAGFYKSNKKNGYSPVAKMFARHGCTMVVPGMDVCMNKQHHSTGSSPDTLLVQMKN
ACRRHGVRIAGENASLVMTHTSSFSRIRSNILTTELMRPCHFTYLRMGAEFFSPDHFPQF
MEFVRSVVCGEWDEDDGPADEERGMTVSGNTRSREAKAV

Transcript Sequence

Transcript ID

Zm00001d022501_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:178945596:178947713:1 gene:Zm00001d022501 gene_biotype:protein_coding transcript_biotype:protein_coding description:Inactive beta-amylase 9
Sequence

ACGAACGGACATTCCCGGGACAACTTGGTCGATTTCCATGCAGACCATGCCGGTGATGAT
GACGCGGATGGCGTCGGCGTCGGCGACGGCGACGCGCCGGCCGCAGGGCACCCGGGCCCC
AGGTGGACGCGCGCCGAACAGGGTCGCGTTCCCACCGGCGCGGCATGGTGGCTGCAGCAG
GGACCTCAGGGCCGCCGGGCTCGGCCGCTTCTTCGGCGTCGGCGACCACAACAACAAGAA
CCACGAGGTGGACGACCTGGACCCGGCGAGGCTGTTCGTGGGCCTGCCCATCGACTCGGT
CACGGACGGCGCGACGGTGAACAGCGCGGCGGCGATCGCGGCGGGGATCCGGGCCGTCCG
GCTGCTGGGCGCGGACGGCGTGGAGCTGCCGGTGTTTTGGTCGGTGGCGCAGCCCGAGTC
CCCCGACAGGTTCAGCTGGGCCGGGTACCAGGCCGTGGCCGACATGGTGCGGGCCGAGGG
CCTGAGCCTCCGCGTGTCGCTTCGCACCCACGGCACGCCCGGCGCCGGCGTGCCCACGCT
GCCCTCCTGGGTCAGCGGCGTCGCCGCCGACGATCCCGACATCTTCTTCACCAACCGCTC
GGGGGGCCGGCACGAGGGATGCCTCTCCTTCGCCATCGACGACCTCCCCGTGCTCCACGG
CAAGTCCCCGCTCCAGCTCTACGAGGCCTTCTTCCGCAGCTTCGCCGTCGCATTCGACGA
CTTCTTCGACTCCACCATCACCGTAACGACGTGACGGTGGGGCTCGGCGCGAACGGCGTG
CTCCGGTACCCGTCGTACCCGCCGGGGAGCGACGCCCGCAAGTTCACGGGGATGGGCGAG
TTCCAGTGCTACGACAAGTACATGCTGCAGCAGCTGAGGCAGCACGCCGCGGAGGAGGGC
CACGCCAGGTGGGGGCTGTCGGGCCCGCACGACGCGCCGCGGTACCACGACTCGCCGGAC
GCGTGCGGCTTCTTCCGGGAGCGCGGCGGATCTTGGGAGACCCCCTACGGCGACTTCTTC
CTGTCGTGGTACGCCGGGCAGTTGGTGGGGCACGGCGACCGCGTCCTGGGCACGGCCAAC
GCCGTGTTCGGCGGCAAGCCCGTGGCGCTGTCGGCCAAGATCCCGTTCATGCACTGGTGG
CACGGGGTGCGGTCGCGCCCTGCCGAGGCCGCCGCGGGCTTCTACAAGAGCAACAAGAAG
AACGGGTACAGCCCCGTGGCCAAGATGTTCGCGCGCCACGGCTGCACCATGGTGGTGCCC
GGCATGGACGTGTGCATGAACAAGCAGCACCACAGCACGGGCTCCAGCCCGGACACCCTG
CTGGTGCAGATGAAGAACGCGTGCCGTCGCCACGGCGTGCGCATCGCCGGCGAGAACGCG
TCGCTCGTCATGACGCACACCAGCAGCTTCTCGCGCATCCGCAGCAACATCCTCACCACC
GAGCTCATGCGGCCCTGCCACTTCACGTACCTGCGCATGGGCGCCGAGTTCTTCTCCCCC
GACCACTTCCCGCAGTTCATGGAGTTCGTGCGAAGCGTCGTGTGCGGCGAGTGGGACGAG
GACGACGGCCCCGCCGACGAGGAGCGTGGCATGACTGTGTCAGGCAATACCAGATCCAGG
GAGGCCAAGGCGGTTTGAAGCTTCAACTCATCGCCGCCCCCGCCATATCTCAGTCAGCTG
TCTCGTTTTATTTTTGAAGTGCCAAAATACTTGCAAATTTCCGCTGCTACTAGATTTAGC
TGAGAAGAACGAGATGATCCAGGTATTAGTGGATCAGGAGTTGCAAATGTGGGATCCCAC
ATGCATTTTTTCTTTTGCCGATGTTTCGTGGTCTTCATTGTTGTTAATTTTTTTGTTTCA
TCTTGAGACCATTTATATTATACTCTCTCTTTT