Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022481_T062
CDS Infomation

cds chromosome:B73_RefGen_v4:7:178471184:178481380:-1 gene:Zm00001d022481 gene_biotype:protein_coding transcript_biotype:protein_coding description:CW-type Zinc Finger
Sequence

ATGAATAGGTGTGAGATTAGTGAAGAGGAGACTACGAATGCTCTGAATGCACTTTATGTC
CCTGCCCCTGCAAATGGTATTCCTGCAGTTGGTCATCCTCATGTTGCTTCAACAGGACTA
GTAACATCCAGCACTCCCAACATGAATGGACATATTGAGCAGAATAGAAAAAGAAAAAAT
ATTCCAAGTGATGGAAATTTTGTGGCTGAGGGTTCTCACCTAACACAGGTTTCAGGTCAT
CCAATGAGCAACCAACATGCTCCTAGTAAAACTAAAACTTATACTGATGGTATCCAGTAT
TCGGCTGAGAGGCATTCTGTAAGCAAATCAGTTGACCCAATAATTGAAAAGAAAAGGTCC
AAGAGCAAGCATCACAGTAGCTATTCTGATGGAGGAGATCTTGTTGAAAGACCTAAGAAG
CATTCTAAAGTGAAAAACAAGAGAGACTTAGATCATGATGAATACAAAGCTTCTAAGAAA
ATTAGGAAAGAAGAGCGACACCATTTTGATGTAGATCGGATCCTTGGATCTGATTTAGCT
AGCGGAGATGTTCCTGATGAGGCCAAGGCTTTGCCTGCGAAGTCAGCAACCTCAAAGGGT
TCAGGTGAAAGGACTGACCTTTCTTCATCAAAGCAAAAAAGTGCCTCACGGCATAATCGT
TTGGAAACTTCCAAGAAAGCAAGACAAGATGATTTAGTTGGTCCTGAAGACGAGAGCAAG
GGATATTTTCACCAGTCAGATGTACAAAGATCAGATTTGTCTAGTAAGAAGAGGATAGTG
AAGGAATGGGAGGAGAGCCAGCACAATTCAGTAGCTCATGTAAGCAAAGGAGCTGTCAAA
GAAACCTATAGGGACCAGAACTTAAAGGAAGCAAAGTTGAAATCATTGAATTCTGAAGAG
CTGTTTTCTATGACGAGCACCAAACCACCAAAAGTTCAACATGCTGATCAGGTTTTGTCT
TATGATGGGGGGCGTATGAACAGTGAGTTAGTTGAGGATAACACACTCTTTAGTGGCAAA
AGAGGTCTGCCTGAACAAGAAAAGAGCCTTTCTGATCAGGCTTTGGACTTGGGTGAACCT
GCTAGTGATGTGGCCTATATTCAGACTTCAGCTGTAACTTCAAGTTCTTCAAAGGCTTCG
GTCTCACAAAAAAAGAAGCAGACCACTCAAGCTATGAAGACTTCACCAATTGAGCCTCTT
TCTTCATCACCACGGAGGAACTCCAACATTGACAAGGTCTCTGTCCCTCATAGTAGAATT
TCAGGTAAGGATGGATCTCTGAATGCTAACTCAGCCACTGTGCCAATCATGGCAAAACAA
CTAAATACTGAAGTTCGCGTAGCAAGCAATGATCAACGGTCTAGTGAACCTGTTTCGGTT
GGTTCTCCCCGAAGAAAATCTGATAGGGATAATGGACTGGTTCAGTTAACTCAAGGTCAT
GCCTCTGATGGTTTTCATCTTGAAAGGGGTTTCAATGAGGACCTGCAGCCTGAATCTGGG
AGAAAGGATTCCAATGTAAAGAGCTCCCATATTCCTAAAGCTTCTCACCATTTGCATTCT
GGTGAAAAAAACAACTACAATACAGATGGCTCTCCTATGCAACCAGGAAAGCATCCTGTT
GATCCAAAGACATCAGTCTTGGATAAATGTGATTCAAGCATGCATGAAAGTAACAAAAGC
ACAAATTCTCTTCAGGATAGAAATGGATCAACTCATTGCCCACCAGATGGAAATCCTCTG
CTCGGTTTACCATCTGGAAAAGAGAAATCATATATCAACAGCAACAAGCAAGATTCACAG
AAGCCTAAACCCCAGATGGTCTGCTCACCTTTGAAAGAAAACAAACTGGATTCTCACTCC
ACACCATTAAAACCTAATGGGTCAAAATTGACTCCACAATCAAGACAATACAATGCTCAA
AATGGAGGACGACATGGCACTGCAAAGCATGCAATTCCTAGTCCTGCTGATACTTCTAGT
CCAGCTAGGAAGGACAATACTTCAACTGCATATGCTCTCAAAGAAGCCCGGGATTTAAAG
CATAAGGCTAATCGTTTGAAGGGAGAAGGAAAAGAGCTTGAAAGTACAAGACTCTACTTT
GAGTCTGCCCTAAAATTTTTGCATGTTGCATCACTTTTGGAACCTCCTAGCTTTGATGGA
TTGAAACAAGGTGATGCAGCCCAGAGCATGTATTCAGATACTGCAAAACTTTGCAACTTT
GTTGGTCATGCATATGAAAAATGCAAGAAGATGGCTGCTGCTGCTTTAGCATACAAATGT
GTTGAAGTTGCTTATCTGAAGGCTGCATACTACAAACACCCAACTGCAAGCAAAGATAGA
CAAGTGTTACAGGCAGTTGTACAGACTGCACCAGGTGAATCACCATCATCTTCAGCCTCA
GACATTGATAATTTAAATAACAATGGATTATCCAAGGCCTCTTCAAGCAAGGATGCTAAT
TCACCACAAGTGGCTGGAAATCATTTGTTGCTGGCCGCTCGAAATCAACCACACTTGATG
CGGTTACTAGCTTATGTAAGTGTTAGATATCTTGATAGGCAGTTGAAC

Peptide Sequence

PEP ID

Zm00001d022481_P062
PEP Infomation

pep chromosome:B73_RefGen_v4:7:178471184:178481380:-1 gene:Zm00001d022481 transcript:Zm00001d022481_T062 gene_biotype:protein_coding transcript_biotype:protein_coding description:CW-type Zinc Finger
Sequence

MNRCEISEEETTNALNALYVPAPANGIPAVGHPHVASTGLVTSSTPNMNGHIEQNRKRKN
IPSDGNFVAEGSHLTQVSGHPMSNQHAPSKTKTYTDGIQYSAERHSVSKSVDPIIEKKRS
KSKHHSSYSDGGDLVERPKKHSKVKNKRDLDHDEYKASKKIRKEERHHFDVDRILGSDLA
SGDVPDEAKALPAKSATSKGSGERTDLSSSKQKSASRHNRLETSKKARQDDLVGPEDESK
GYFHQSDVQRSDLSSKKRIVKEWEESQHNSVAHVSKGAVKETYRDQNLKEAKLKSLNSEE
LFSMTSTKPPKVQHADQVLSYDGGRMNSELVEDNTLFSGKRGLPEQEKSLSDQALDLGEP
ASDVAYIQTSAVTSSSSKASVSQKKKQTTQAMKTSPIEPLSSSPRRNSNIDKVSVPHSRI
SGKDGSLNANSATVPIMAKQLNTEVRVASNDQRSSEPVSVGSPRRKSDRDNGLVQLTQGH
ASDGFHLERGFNEDLQPESGRKDSNVKSSHIPKASHHLHSGEKNNYNTDGSPMQPGKHPV
DPKTSVLDKCDSSMHESNKSTNSLQDRNGSTHCPPDGNPLLGLPSGKEKSYINSNKQDSQ
KPKPQMVCSPLKENKLDSHSTPLKPNGSKLTPQSRQYNAQNGGRHGTAKHAIPSPADTSS
PARKDNTSTAYALKEARDLKHKANRLKGEGKELESTRLYFESALKFLHVASLLEPPSFDG
LKQGDAAQSMYSDTAKLCNFVGHAYEKCKKMAAAALAYKCVEVAYLKAAYYKHPTASKDR
QVLQAVVQTAPGESPSSSASDIDNLNNNGLSKASSSKDANSPQVAGNHLLLAARNQPHLM
RLLAYVSVRYLDRQLN

Transcript Sequence

Transcript ID

Zm00001d022481_T062
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:178471184:178481380:-1 gene:Zm00001d022481 gene_biotype:protein_coding transcript_biotype:protein_coding description:CW-type Zinc Finger
Sequence

GAGGGAAGGGGGAGACCGAGGGCAACCAAGCCTGCGAGGAGCCCGCGTCCGAATCTCGCG
ATCCCCAATCCGCAGGCCTCGATTCGCCGATCCGGCCGCGGCAGGGGGAGAGATCCCGCA
GATCGGGGACCTCGTGCTGCTGTGTGCTGCCTGGTGGTAGGTAGGTGGTTAGGCGGACTC
GGCATGGACGACGACGCCGAGCTCGAGGAGGGGGAGGCCTGCGGGGACGACACCGCCTTC
GTCGACCCCGACGTCGCGCTCTCTTACATTGACGAAAAACTTCAAGATGTACTTGGCCAT
TTTCAGAAGGACTTCGAAGGAGGCGTGTCTGCAGAGAATCTAGGGTCCAAATTTGGTGGA
TATGGTTCATTTTTACCTACGTACCAGCGCTCCCCTCTCCCCCAAACTAGAAGTCCACTT
AAGGCAGCAAATGCTACCTCAAAATCTCCCTTCCACCAGTCTAGCGAGGGCATGTCTCAA
AAGCCTCCTGCTGTGACAGTTTCATCTACCCCCCAAAGTAATGGTCCTATGGTGCCTTTT
TCTGGCGATTCAATTAAAAAGGAAATACGCCCAACCACAAAGGCTGAAGGGGGTTCCGTC
TCCCATGATTCGTATGGACCATTGAAATGTCATGACCAAAATAGACTTAAAGTCCGGATA
AAAGTTGGCTCTGATAATGTTTTGGCAAGAAATAATGCGGATATCTACAGTGGTCTGGGC
CTTGATATTTCTTCACCTTCATCCATCGAGGATAGCCCCGATGGCCGTGGGAGCCTATCC
CCTGAAGTTAACAATGTGCCACATGAATCTCCACAAACCATCCTTCAGATCATGACATGC
TTTTCAGTTCCTGGAGGCTTCCTGTTATCCCCTCTACCAGCCAATATCTTGCAATTGACA
AAAAAGGTTGTGGCTTCGTCAAAGAAGTGGGAATCAAATGTGCACATAGAAAGTGTACAA
GAACCATATGAAGGCCACACGACTAAAAAGGTAAAATCTGATGCTAAGAAAAAGAAGCTG
ATAGATGCAAAAAATTCAAAGAACAGAAATGATATTAGTGCAGTTATGAAAAAGGAGATT
GATATAGAAACAGTTGCTGGTCAAAAGATCGTATCCGAAGCTCTCAACATATCATTGCTG
TCTGATCCCAGAGCCATGGATGCAAAAGGTGAGAATCGACTTGAAGTGGAACCAGCAGAA
AACAACTTGGCGGGAACTAGAGATGCCCGATTGAAAGAGCGGTCCACTAAGACCAACTCC
ATGCCAATCATAGTTGAACCTGCCAAAGCAGAGGCGACGGAATGCTTAGAGAACAGTAGT
TTTGGTAGTTCAGAAATGGATTTTTCAGCAGTAAAAGCGGAATCAAAATCCAAGGCAGAA
AAGGGAGAGGCAACTTTAGAAGAGAGGAATACAACTAATGGCAAAGACCTAATATCGGAT
AGGAAGCAAGAAAAGAAAATGAAACCTGAGAGTAAATATAACGCCTCTAACTTTGAAGTT
AGCAATGTTATAAACGAAAGAGGTCCAGCTGTTTCCCGGAGCATGGGCAAAGTTTCTGGT
AAAGAAGCCTTACCTTATGACACAAATGAGGAAAATAGCTCCAAGAATGAGGTCAAAAAA
ATGCAGAGAGAACAAAAGACCAATGCTTCGAGATCTTCTGATTTCCTGGAGGATGAGAAA
CACATTCGTTCTTCTGCTGCAGTTAAGGAGAGGAAAAGTGACATGCAATCCAAATCTAGC
CATACTGGAAAGAAACCCAAAACAAAATCACATAGAGATGTTAGGGACAACCTGCCTGAA
GGATCTCACGGAAGCAAGGAAAAAGACACATTGGAGAATGAAAGTGCCTTTGGAGATCTC
CGACCAAAGGAAAAGCCATGGAAATATGACATCGAGAGGGATTCTGATGCACCTGGGATC
TCTAGGAGGGAGATTTCTTCTAGTGTAAAGCATGATAAGCACTTGGCTTCTGAGGAGCAG
AAGATGCATATACCTCCACCTTCCACTGTATCAACTGCAAATGCAGCTCCAGTTGTGATA
AAGGAGCATTGGTCTTAAAGCTAGAAAGGATGTATGCTGGGATGTTAGAGCAACAATATT
TCTCTATGTTCGTGTGTGATGAACACTGATAATTCCTTGCTGCATTTGGATTACATGAAA
CTTTTACAGACCCGGGATGAATAGGTGTGAGATTAGTGAAGAGGAGACTACGAATGCTCT
GAATGCACTTTATGTCCCTGCCCCTGCAAATGGTATTCCTGCAGTTGGTCATCCTCATGT
TGCTTCAACAGGACTAGTAACATCCAGCACTCCCAACATGAATGGACATATTGAGCAGAA
TAGAAAAAGAAAAAATATTCCAAGTGATGGAAATTTTGTGGCTGAGGGTTCTCACCTAAC
ACAGGTTTCAGGTCATCCAATGAGCAACCAACATGCTCCTAGTAAAACTAAAACTTATAC
TGATGGTATCCAGTATTCGGCTGAGAGGCATTCTGTAAGCAAATCAGTTGACCCAATAAT
TGAAAAGAAAAGGTCCAAGAGCAAGCATCACAGTAGCTATTCTGATGGAGGAGATCTTGT
TGAAAGACCTAAGAAGCATTCTAAAGTGAAAAACAAGAGAGACTTAGATCATGATGAATA
CAAAGCTTCTAAGAAAATTAGGAAAGAAGAGCGACACCATTTTGATGTAGATCGGATCCT
TGGATCTGATTTAGCTAGCGGAGATGTTCCTGATGAGGCCAAGGCTTTGCCTGCGAAGTC
AGCAACCTCAAAGGGTTCAGGTGAAAGGACTGACCTTTCTTCATCAAAGCAAAAAAGTGC
CTCACGGCATAATCGTTTGGAAACTTCCAAGAAAGCAAGACAAGATGATTTAGTTGGTCC
TGAAGACGAGAGCAAGGGATATTTTCACCAGTCAGATGTACAAAGATCAGATTTGTCTAG
TAAGAAGAGGATAGTGAAGGAATGGGAGGAGAGCCAGCACAATTCAGTAGCTCATGTAAG
CAAAGGAGCTGTCAAAGAAACCTATAGGGACCAGAACTTAAAGGAAGCAAAGTTGAAATC
ATTGAATTCTGAAGAGCTGTTTTCTATGACGAGCACCAAACCACCAAAAGTTCAACATGC
TGATCAGGTTTTGTCTTATGATGGGGGGCGTATGAACAGTGAGTTAGTTGAGGATAACAC
ACTCTTTAGTGGCAAAAGAGGTCTGCCTGAACAAGAAAAGAGCCTTTCTGATCAGGCTTT
GGACTTGGGTGAACCTGCTAGTGATGTGGCCTATATTCAGACTTCAGCTGTAACTTCAAG
TTCTTCAAAGGCTTCGGTCTCACAAAAAAAGAAGCAGACCACTCAAGCTATGAAGACTTC
ACCAATTGAGCCTCTTTCTTCATCACCACGGAGGAACTCCAACATTGACAAGGTCTCTGT
CCCTCATAGTAGAATTTCAGGTAAGGATGGATCTCTGAATGCTAACTCAGCCACTGTGCC
AATCATGGCAAAACAACTAAATACTGAAGTTCGCGTAGCAAGCAATGATCAACGGTCTAG
TGAACCTGTTTCGGTTGGTTCTCCCCGAAGAAAATCTGATAGGGATAATGGACTGGTTCA
GTTAACTCAAGGTCATGCCTCTGATGGTTTTCATCTTGAAAGGGGTTTCAATGAGGACCT
GCAGCCTGAATCTGGGAGAAAGGATTCCAATGTAAAGAGCTCCCATATTCCTAAAGCTTC
TCACCATTTGCATTCTGGTGAAAAAAACAACTACAATACAGATGGCTCTCCTATGCAACC
AGGAAAGCATCCTGTTGATCCAAAGACATCAGTCTTGGATAAATGTGATTCAAGCATGCA
TGAAAGTAACAAAAGCACAAATTCTCTTCAGGATAGAAATGGATCAACTCATTGCCCACC
AGATGGAAATCCTCTGCTCGGTTTACCATCTGGAAAAGAGAAATCATATATCAACAGCAA
CAAGCAAGATTCACAGAAGCCTAAACCCCAGATGGTCTGCTCACCTTTGAAAGAAAACAA
ACTGGATTCTCACTCCACACCATTAAAACCTAATGGGTCAAAATTGACTCCACAATCAAG
ACAATACAATGCTCAAAATGGAGGACGACATGGCACTGCAAAGCATGCAATTCCTAGTCC
TGCTGATACTTCTAGTCCAGCTAGGAAGGACAATACTTCAACTGCATATGCTCTCAAAGA
AGCCCGGGATTTAAAGCATAAGGCTAATCGTTTGAAGGGAGAAGGAAAAGAGCTTGAAAG
TACAAGACTCTACTTTGAGTCTGCCCTAAAATTTTTGCATGTTGCATCACTTTTGGAACC
TCCTAGCTTTGATGGATTGAAACAAGGTGATGCAGCCCAGAGCATGTATTCAGATACTGC
AAAACTTTGCAACTTTGTTGGTCATGCATATGAAAAATGCAAGAAGATGGCTGCTGCTGC
TTTAGCATACAAATGTGTTGAAGTTGCTTATCTGAAGGCTGCATACTACAAACACCCAAC
TGCAAGCAAAGATAGACAAGTGTTACAGGCAGTTGTACAGACTGCACCAGGTGAATCACC
ATCATCTTCAGCCTCAGACATTGATAATTTAAATAACAATGGATTATCCAAGGCCTCTTC
AAGCAAGGATGCTAATTCACCACAAGTGGCTGGAAATCATTTGTTGCTGGCCGCTCGAAA
TCAACCACACTTGATGCGGTTACTAGCTTATGTAAGTGTTAGATATCTTGATAGGCAGTT
GAAC