Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d022439_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:177710234:177713974:1 gene:Zm00001d022439 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar-sorting receptor 1
Sequence	ATGGCGTCGACGGCGGCCAGGCGGCTGCTTCTGCCGCTGCTGCTGGTGGCGCTCATCGCG GCGCACCGGGCGGCGGCGCGGTTCGTGGTGGAGAAGAACAGCCTGCGGGTCACGTCCCCG GCCGTGCTCCGGGGCGTCTACGAGTGCGCCATCGGCAACTTTGGCATGCCGCAGTACGGC GGCACCATGCACGGCGTTGTCGTCTACCCCAAGGCCGACGCCAAAGCCTGCAGGCCCTTC GCCGACTCCGGCCTCTCCTTCAAGCCCAGGTCCGGCGGCCTGCCCGTCTTCCTGCTCGTC GATCGCGGAGATTGCTACTTCACAACCAAGGGATGGAACGCACAGAACGCCGGAGCTGCA GCAGTTCTTGTGGCCGACGACAGAGTGGAGCCTCTGATCACGATGGACTCCCCAGAATCC AGCGGCACGGAGCACATAGAGAACATCACGATCCCATCGGCGCTCGTGACCAAGAGATTC GGCGAGGACCTGAGGAAAGCGCTGCAGAGCGGGGACATGGTGAACGTCCTCCTGGACTGG AGGGAGTCCCTGCCCCACCCCGACGAGCGCGTGGAGTACGAGCTCTGGACGAACAGCAAC GACGAGTGCGGCGCCAAGTGCGACATGCAGATGAGCTTCGTGAGGAGCTTCAGGGGCATC GCGCAGGCTCTCGAGAAGAGGGGGTACACCCAGTTCACCCCGCACTACATCACGTGGTAC TGCCCCGAAGCCTTCGTCCTCAGCAAGCAGTGCAGGTCGCAGTGCATCAACCACGGGAGG TACTGCGCGCCGGACCCGGAGCAGGATTTCAGCACCGGTTACGACGGCAGGGATGTCGTG CTCCAGAACCTGGTCCAGATCTGCGTGTTCAGGGTCGCCAATGGGACTCGCAGGCCGTGG ATGTGGTGGGACTACGTGCACGACTTCGCTGTGAGGTGCCCGATGAAGGAGAAGAAGTAC ACGCGTGAGTGTGCGAATGGTGTTATCAATTCACTTGGACTGGACATCGAGAAAATCAAC AAGTGTGTTGGAGATCCAGAAGCTGATAAAGAAAATCCAGTCCTTAAGGCAGAGCAGGAC GCTCAGATTGGGCATGGTTCTCGCGGCGATGTAACTATACTGCCTACTCTTGTCGTCAAC AACAGACAGTACAGAGGTAAACTGGAAAAAACATCTGTGTTAAAAGCAGTATGCTCTGGG TTTGAGGAGACAACTGAACCTGATGTCTGTTTGCGCGAAGATATCGAGACAAATGAATGT TTGGAGAACAATGGTGGTTGCTGGTTAGACAAGGCTACCAATGTTTCTGCGTGCAAGGAT ACCTTCCGTGGTCGTGTCTGCGAATGCCCTATTGTGAATGGTGTGAAGTTTATCGGTGAT GGGTACAACCACTGTGAAGCTTCTGGCCTTGGTAGGTGCCAGATCAACAATGGGGGCTGC TGGAATGAGACTAGGAACGGGAAGAGTGTGTCTGCCTGCTCAAACCAAGAAGCTAAAGGC TGCAAGTGCCCAGCAGGTTTCAAGGGCGACGGAGCCAACAGCTGCGAAGATGTGGATGAG TGCAAGGAGAAGCTTTTCTGCCAGTGCAAGGACTGCGCTTGCGAGAACACGTGGGGAAGC TACGAGTGCAGCTGCGGCGGCGGCAACTCGCTGTACATCAGAGAGCATGACACTTGCATC AGCAAACATTCCAGCTCGACGCCGAGCTGGGGCTTCCTGTGGGTGGTTTTCTTGGGCCTT GCCTTGGCCGGAGCAGGAGCGTACGCCGTGTACAAATACAGGCTACGGAGCTACATGGAT TCAGAGATCCGCGCGATCATGGCCCAGTACATGCCCCTGGAGAGCCAAGACATGCCGAGC CAACAACACCACCTCGTCCCCGTCGACCGTGCAGACGTCTGA

Peptide Sequence

PEP ID	Zm00001d022439_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:177710234:177713974:1 gene:Zm00001d022439 transcript:Zm00001d022439_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar-sorting receptor 1
Sequence	MASTAARRLLLPLLLVALIAAHRAAARFVVEKNSLRVTSPAVLRGVYECAIGNFGMPQYG GTMHGVVVYPKADAKACRPFADSGLSFKPRSGGLPVFLLVDRGDCYFTTKGWNAQNAGAA AVLVADDRVEPLITMDSPESSGTEHIENITIPSALVTKRFGEDLRKALQSGDMVNVLLDW RESLPHPDERVEYELWTNSNDECGAKCDMQMSFVRSFRGIAQALEKRGYTQFTPHYITWY CPEAFVLSKQCRSQCINHGRYCAPDPEQDFSTGYDGRDVVLQNLVQICVFRVANGTRRPW MWWDYVHDFAVRCPMKEKKYTRECANGVINSLGLDIEKINKCVGDPEADKENPVLKAEQD AQIGHGSRGDVTILPTLVVNNRQYRGKLEKTSVLKAVCSGFEETTEPDVCLREDIETNEC LENNGGCWLDKATNVSACKDTFRGRVCECPIVNGVKFIGDGYNHCEASGLGRCQINNGGC WNETRNGKSVSACSNQEAKGCKCPAGFKGDGANSCEDVDECKEKLFCQCKDCACENTWGS YECSCGGGNSLYIREHDTCISKHSSSTPSWGFLWVVFLGLALAGAGAYAVYKYRLRSYMD SEIRAIMAQYMPLESQDMPSQQHHLVPVDRADV

Transcript Sequence

Transcript ID	Zm00001d022439_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:177710234:177713974:1 gene:Zm00001d022439 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar-sorting receptor 1
Sequence	GACCGCCGGCCCAGTCAAAAGCAAACCCTCCGGACACGGCCGCACGGGGCGCAGGTCCCT CTGTTGCCCCGCTTGGTCGTTGCTCCCGCGCCCCCGCCCGCAAATGCCTCTCCTCTCGCG CGCCTTTTCTTGTCCTGAAGCCACCCAAGCCGTGCCTGCCCCTCGCTCGATCTACCCCCC TCCTTCCTCGGCTAGCTCCAAGAACCCGTCCCACTTCTCCACTTCTTGGCAGGTCGATCG GCCGTGAACGATTTCGGATCCTGTCGCGCGCGCGTGTCCATGGCGTCGACGGCGGCCAGG CGGCTGCTTCTGCCGCTGCTGCTGGTGGCGCTCATCGCGGCGCACCGGGCGGCGGCGCGG TTCGTGGTGGAGAAGAACAGCCTGCGGGTCACGTCCCCGGCCGTGCTCCGGGGCGTCTAC GAGTGCGCCATCGGCAACTTTGGCATGCCGCAGTACGGCGGCACCATGCACGGCGTTGTC GTCTACCCCAAGGCCGACGCCAAAGCCTGCAGGCCCTTCGCCGACTCCGGCCTCTCCTTC AAGCCCAGGTCCGGCGGCCTGCCCGTCTTCCTGCTCGTCGATCGCGGAGATTGCTACTTC ACAACCAAGGGATGGAACGCACAGAACGCCGGAGCTGCAGCAGTTCTTGTGGCCGACGAC AGAGTGGAGCCTCTGATCACGATGGACTCCCCAGAATCCAGCGGCACGGAGCACATAGAG AACATCACGATCCCATCGGCGCTCGTGACCAAGAGATTCGGCGAGGACCTGAGGAAAGCG CTGCAGAGCGGGGACATGGTGAACGTCCTCCTGGACTGGAGGGAGTCCCTGCCCCACCCC GACGAGCGCGTGGAGTACGAGCTCTGGACGAACAGCAACGACGAGTGCGGCGCCAAGTGC GACATGCAGATGAGCTTCGTGAGGAGCTTCAGGGGCATCGCGCAGGCTCTCGAGAAGAGG GGGTACACCCAGTTCACCCCGCACTACATCACGTGGTACTGCCCCGAAGCCTTCGTCCTC AGCAAGCAGTGCAGGTCGCAGTGCATCAACCACGGGAGGTACTGCGCGCCGGACCCGGAG CAGGATTTCAGCACCGGTTACGACGGCAGGGATGTCGTGCTCCAGAACCTGGTCCAGATC TGCGTGTTCAGGGTCGCCAATGGGACTCGCAGGCCGTGGATGTGGTGGGACTACGTGCAC GACTTCGCTGTGAGGTGCCCGATGAAGGAGAAGAAGTACACGCGTGAGTGTGCGAATGGT GTTATCAATTCACTTGGACTGGACATCGAGAAAATCAACAAGTGTGTTGGAGATCCAGAA GCTGATAAAGAAAATCCAGTCCTTAAGGCAGAGCAGGACGCTCAGATTGGGCATGGTTCT CGCGGCGATGTAACTATACTGCCTACTCTTGTCGTCAACAACAGACAGTACAGAGGTAAA CTGGAAAAAACATCTGTGTTAAAAGCAGTATGCTCTGGGTTTGAGGAGACAACTGAACCT GATGTCTGTTTGCGCGAAGATATCGAGACAAATGAATGTTTGGAGAACAATGGTGGTTGC TGGTTAGACAAGGCTACCAATGTTTCTGCGTGCAAGGATACCTTCCGTGGTCGTGTCTGC GAATGCCCTATTGTGAATGGTGTGAAGTTTATCGGTGATGGGTACAACCACTGTGAAGCT TCTGGCCTTGGTAGGTGCCAGATCAACAATGGGGGCTGCTGGAATGAGACTAGGAACGGG AAGAGTGTGTCTGCCTGCTCAAACCAAGAAGCTAAAGGCTGCAAGTGCCCAGCAGGTTTC AAGGGCGACGGAGCCAACAGCTGCGAAGATGTGGATGAGTGCAAGGAGAAGCTTTTCTGC CAGTGCAAGGACTGCGCTTGCGAGAACACGTGGGGAAGCTACGAGTGCAGCTGCGGCGGC GGCAACTCGCTGTACATCAGAGAGCATGACACTTGCATCAGCAAACATTCCAGCTCGACG CCGAGCTGGGGCTTCCTGTGGGTGGTTTTCTTGGGCCTTGCCTTGGCCGGAGCAGGAGCG TACGCCGTGTACAAATACAGGCTACGGAGCTACATGGATTCAGAGATCCGCGCGATCATG GCCCAGTACATGCCCCTGGAGAGCCAAGACATGCCGAGCCAACAACACCACCTCGTCCCC GTCGACCGTGCAGACGTCTGAAACGGCTAGGCTTGTTTGCATGACATGGATCCCATCGCA TCGTCGGCAGAGAAGAGAAGTCGGCGGCACCGGCATCTTCCTCCCTTGGTGCGCAGAATA TGGATGCTGAAAATTCACAGTTTCACGGAGCAGATTAGGATCTCTCTCCGCAGTTTAGAG CCCGTTTGTCAGGTTTAGAGCTCGCAGTCGTGCTGTGCCGTGCGTAAAAGTAATCGTCGA GTGTTCTGTAAATATTCCTGTTGAGACCCAACGCTGAAGCGCGCGTCTGTTGCTGTGCTG CCCTGAATAAAAGTACAGAGGATGAGAGGAATATGTTTCTTTATTTCTGTTAGTTGCTTC ACTCAAATGCAGCACACATATAGGGACCTCTAATTTATAGACAAAAGCTAGTGTTTCTGT TATATGGGTCACATGGCCTTCTTAGGCTACATGGTTTC