Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022430_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:177582454:177583056:-1 gene:Zm00001d022430 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-binding protein CAST

Sequence

ATGGAAACGGAGCAGCAGGGCGTGGTTGCGGGGGTGAAGCCGACGCTGGCCAAGGGGACG
CCGTCGGCGTCGTTCCGGCTCCGCAACGGGAGCCTAAACGCGGTGCGCCTCCGCCGCGTG
TTCGACCTGTTCGACCGCAACGGGGACGGCGAGATCACGGTGGACGAGCTGGCGCAGGCG
CTGGACGCGCTGGGCCTCGACGCGGACCGCGGCGGGCTGGCCGCCACCGTTGGCACCTAC
GTGCCCGACGGCGCCGCGGGCCTCCGCTTTGAGGACTTCGACCGGCTGCACCGCGCGCTC
GGGGACGCCTTCTTCGGAGCGCTGGCGGGCCAGGACGACGCGGCCGCGGACGGCGCCGGC
GCCGGGGAGGACGACGACGAGCAGGAGATGCGGGAGGCGTTCAGGGTCTTCGACGTCGAC
GGCGACGGCTTCATCTCTGCCGCCGAGCTGCAGGAGGTGCTCAAGAAGCTCGGCCTCCCC
GAGGCCAGCAGCATGGCCAACGTCCGGGAGATGATCTGCAACGTCGACCGCGACAGCGAC
GGCCGCGTCGACTTCGCCGAGTTCAAGTGCATGATGCAGGGGATCACCGTCTGGGGCGCC
TGA

Peptide Sequence

PEP ID

Zm00001d022430_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:177582454:177583056:-1 gene:Zm00001d022430 transcript:Zm00001d022430_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-binding protein CAST

Sequence

METEQQGVVAGVKPTLAKGTPSASFRLRNGSLNAVRLRRVFDLFDRNGDGEITVDELAQA
LDALGLDADRGGLAATVGTYVPDGAAGLRFEDFDRLHRALGDAFFGALAGQDDAAADGAG
AGEDDDEQEMREAFRVFDVDGDGFISAAELQEVLKKLGLPEASSMANVREMICNVDRDSD
GRVDFAEFKCMMQGITVWGA

Transcript Sequence

Transcript ID

Zm00001d022430_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:177582454:177583056:-1 gene:Zm00001d022430 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-binding protein CAST

Sequence

ATGGAAACGGAGCAGCAGGGCGTGGTTGCGGGGGTGAAGCCGACGCTGGCCAAGGGGACG
CCGTCGGCGTCGTTCCGGCTCCGCAACGGGAGCCTAAACGCGGTGCGCCTCCGCCGCGTG
TTCGACCTGTTCGACCGCAACGGGGACGGCGAGATCACGGTGGACGAGCTGGCGCAGGCG
CTGGACGCGCTGGGCCTCGACGCGGACCGCGGCGGGCTGGCCGCCACCGTTGGCACCTAC
GTGCCCGACGGCGCCGCGGGCCTCCGCTTTGAGGACTTCGACCGGCTGCACCGCGCGCTC
GGGGACGCCTTCTTCGGAGCGCTGGCGGGCCAGGACGACGCGGCCGCGGACGGCGCCGGC
GCCGGGGAGGACGACGACGAGCAGGAGATGCGGGAGGCGTTCAGGGTCTTCGACGTCGAC
GGCGACGGCTTCATCTCTGCCGCCGAGCTGCAGGAGGTGCTCAAGAAGCTCGGCCTCCCC
GAGGCCAGCAGCATGGCCAACGTCCGGGAGATGATCTGCAACGTCGACCGCGACAGCGAC
GGCCGCGTCGACTTCGCCGAGTTCAAGTGCATGATGCAGGGGATCACCGTCTGGGGCGCC
TGA