Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d022429_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:7:177465542:177475836:-1 gene:Zm00001d022429 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 33A
Sequence	ATGTCCTTTATAAGTGAACTTGTGAAAGATGTTTCAAAGAGGAGTGATGTGGGTGAGTCA ACAATAATATATTGTACGACCATCCGGGACACAGAACAGGTTCATGAGGCTTTAGTTACT TCTGGAATCAAGACTGGAATCTATCATGGTCAAATGGGCAGCAGAGCTAGAGAGGAATCC CATAGATCCTTCATTAGGGATGAAGTTCTTGTAATGGTGGCAACTATAGCTTTTGGGATG GGTATTGATAAGCCTGATGTTAGATGTGTAATACACTATGGATGTCCAAAGAGCCTAGAG TCTTACTACCAGGAAAGTGGGCGTTGTGGAAGAGATGGACTGCCTTCAATCTGCTGGCTA TATTACCAAAGAAGTGATATTACAAAAGCTGATTTCTATTGTTCTGAGGCAAAAAATGAA ACCCAGAGGAAAGCAATCATGGATTCCTTCATGGCAGCACAAAAATATTGCTTGCTTGCT ACATGCCGTAGGAGGTTCTTATTGCAATATTTTGGTGAAGAATGGAACATTGACTGTGGT AATTGTGATAATTGCACAGCAGTGAAAAATGAGAGGGATTTGTCAAAAGAAGTCTTTTTG TTGCTGTCCTGCATCAAATCTTGTGGAGGACGCTGGGGCCTCAATTTACCTATTGATGTT CTCCGTGGCTCACGAGCCAAGAAGATTGTTGACAACAATTATGATAAACTACAAATGCAT GGGCGTGGTAAAGATTATTCGTCAAACTGGTGGAAAGCACTTGGTGGTCTTCTTATAGCA CATGATTATTTGAAGGAGACTGTTCGTGATACATTTAGATTTGTCAGTGTCAGTCCAAAA GGGGTCAAGTTTCTCTCTACTGCTGATAAAATAGATGGAGCACCACTGGTATTTCAGCTG ACTGCAGAGATGATTGAACTAGAGGAGCACGGTAGTTCACATCATAAAGAAGGTGGTTTG AATCTTGTGCCAACATTAGAATCTGAAAAATTTTCTGAGGATGAATCAAAACTCTATCAA AGGCTCCTGAATGTTAGGATGAAGATTGCTCAAGATATTGGCACTGCTCCGTATGCTGTA TGTGGCGATCAGACAATAAGAAACTTTGCAAAGATGAGACCTTCTACTGGAGCTAGACTT GCTAATATCGATGGTGTCAACCAGCATTTTATTTCACGTTTCAGTAACATTTTCATCCAA AATATTGCGGAATTGTCGAAGGAGTTAAACCTCCCGTTGGATAATTCACCATTTCCACCA CCACCACCAACAAATCCAGCTGCAGAAAATATTGCTGGTATACCAAAACCTGTACAAAAC AATCTTCCTGGGATCTTGGGTGATGCAAAGCTGACTGCATGGGAATTGTGGCATAAGCAG GAGTACTCATTCCTGAAAATTGCTTATTTCCGCAGAGCAGTGCCAATAAAAGAGCAAACA GTTATTGCGTACATTCTTGATGCTGCTCGAGAAGGATGTGAGATGGACTGGAGTAGGTTT TGCAGGGAAGTAGGGCTGACACCTGATATAGCCACCGCAATTCGTCTTGCAATCTCAAAG GTTGGATCACGTGAGAAAATGAAGCCAATCAAAGAGGAGCTCCCAGAGAATGTAACTTAT GACATGATCAAGACATTCCTGACTATTGAGGGGTGTGGATTGTCAGAGCAAGTCTTTGGT AACGGTACCGCTGACGGTGTCTCTAGTAGAATAGCAGAGTCACCAATATCTTCCTGCCAT GCAAGTGAAGCAGGCGGAAATGGTGTCCCAGCAGCGGCAGAGGCCAGTGATGCAAACCCT TCAGCAAAGAGAGGTCAAACTGTTTGTGCTGAGGAGCCAGCAACAAAACTGCAAAGGACA TACGAGCATGGAGCTGAGTTAACTGGCACGGCGACTGCTACTGTAGATTCTGTGCTAGAT CTGGTTGCGAGCTGCAATGGGGTATCGCTGGAGGATGTTGCCAAGCACTTCAAGGGATCC AAGAGAGAATCGGTCCTGGAGATATTGGAGGGCCTTGAATCTGAATTCACAATTTACAAG AAAAACGGGAACTACATGGTCCTGTGA

Peptide Sequence

PEP ID	Zm00001d022429_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:7:177465542:177475836:-1 gene:Zm00001d022429 transcript:Zm00001d022429_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 33A
Sequence	MSFISELVKDVSKRSDVGESTIIYCTTIRDTEQVHEALVTSGIKTGIYHGQMGSRAREES HRSFIRDEVLVMVATIAFGMGIDKPDVRCVIHYGCPKSLESYYQESGRCGRDGLPSICWL YYQRSDITKADFYCSEAKNETQRKAIMDSFMAAQKYCLLATCRRRFLLQYFGEEWNIDCG NCDNCTAVKNERDLSKEVFLLLSCIKSCGGRWGLNLPIDVLRGSRAKKIVDNNYDKLQMH GRGKDYSSNWWKALGGLLIAHDYLKETVRDTFRFVSVSPKGVKFLSTADKIDGAPLVFQL TAEMIELEEHGSSHHKEGGLNLVPTLESEKFSEDESKLYQRLLNVRMKIAQDIGTAPYAV CGDQTIRNFAKMRPSTGARLANIDGVNQHFISRFSNIFIQNIAELSKELNLPLDNSPFPP PPPTNPAAENIAGIPKPVQNNLPGILGDAKLTAWELWHKQEYSFLKIAYFRRAVPIKEQT VIAYILDAAREGCEMDWSRFCREVGLTPDIATAIRLAISKVGSREKMKPIKEELPENVTY DMIKTFLTIEGCGLSEQVFGNGTADGVSSRIAESPISSCHASEAGGNGVPAAAEASDANP SAKRGQTVCAEEPATKLQRTYEHGAELTGTATATVDSVLDLVASCNGVSLEDVAKHFKGS KRESVLEILEGLESEFTIYKKNGNYMVL

Transcript Sequence

Transcript ID	Zm00001d022429_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:177465542:177475836:-1 gene:Zm00001d022429 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of RNA polymerase II transcription subunit 33A
Sequence	GATTTGGCGGGAACATCGATAATATGCCGCCGTTTTCCTTCCCCGAACCCTCCACCTTCG CCGGCCCGTCAGCCACGACCGCCACCATTCAATCCTTCCACTTCCATCCCTACTCCGTCT CCTCTACCGTCCACCCATTCCGGCGGAGCTCCCCGCCAGAATGGAGGCGGCGCTGAAGGG CTATTTCGGGTACTCAACGTTCCGGCCGTACCAGAGGGAGATCATACAGAAGGTCCTGGA TGGGCGGGATTGCCTCGTCGTCATGGCCACCGGAAGCGGCAAGTCCATCTGGTAAAGTTG GTTTCCCTGGCTTGTTTTTTTTTTGCGTGTGTCTGTTTTATCACGAAATGGTCGTGAGGC GCTTGCTGCTTTCACGAAATGGTACTATCTAAGGGTGTGTTTGGTTTGGCTTTTGGTTTT GGCTTTTGCCCCATAAAAGCCAAAAGCCAACCAAAGGGCTGGATCCAGGAAGCAGCTTTT TCTAAAAGCCGACTTTCTCGTAGTGCAAAACTGAAAGCACCCCTGGACCTGCTTTTAGTG GCTTTTGAATGGAACTGTGAAAACATATATCGAAGAACTTTTAACGACTTTTAGTGGTTT CCACCAAACGATTTTTAGCTTTTTAACAGCACACAGCCTACAACAGCTTTTTCCACAGCT CACAGCCCACAACAACTTTTTCCACAGCCACAGCCCAACCAAACAGACCCTAAGTTCCGC TGCTGCATCTTTTGGGTGATAAGTTGTACCTCTGGGCGCTTACTGGATCTATTTTCCGTG GAGGTTAGGATATTGCTCGAAATTGGTTGCAATGGTTTCATAAATACATTTTGCTGAAAG AAAAGTGGGGAAATATCCTGAGCAATCATATATTTTATGCAATCATGAGTAATCTGTATC ATTGATTGTAAATCATGCGTTCTGTTTTGTTTCTTAGTGCAAATACCCCCTCATTATTCG AAGACGCCATATGATGACCAATCAAATGTGGAGATTTCTAAGCTATAGCGGCCACGTTTT TTGTTGTAGTATGCATATCGTATCATTTTCTGCCTGGAGAACTCAGGTCAGATGGAGTTT AACTGCGCTTAGGAAATGATGATTAGAGAGGATTGTGCAGAAACCGGCAAAATTATCTTT TCAAAAGGACAAGACCACTTTTTTTCTCTCTTTCATAATTCATAATTGTTGTCATCTGCA AAACCTTTTAGAACTGCTTTGTTTATCAATTTCTACAGAAATCTGTAGTAGGTTGTTGAC AGTAGAGCTGTGGGTGTGCAGCAGGCCTTCAAGCAAAAATGCTTCCTATTTGCTAATTTG TTTTTTTGGCAAGTATAGATATAGAATTTTTGTCCTCATAAATTGTTTGCTGTTCTCTCA CATTTCTTTAGAGAAAAAGAAATGTGTTTTGCCGAACTTATTTATATTAAGTAAATATTT TATACTAGCCTCAAAAGGCCATAGTTCTTTCCTGGTATATCCATACAATAGGTAGTAACA TAAACTGAAAGATTCCATTATTTCCTTTTATATACAAAATTACTGTCCGTTTTATGGCAG CTATCAGATTCCCCCACTGGTTACGAAGAAAACAGCTGTCGTTGTAAGCCCTCTTCTGTC CCTGATGCAAGACCAGGTTATGAGTTTAAAACAAAAAGGTGTGAAATCTGAGTACCTTGG CAGCACCCAAACGAATAGCTCCGTCAGTAATGAGGCAGAAAAAGGCACGTTTGATGTGCT TTACATGACACCGGAGAAAGCCATTTCACTTCCTTCAAGATTTTGGAGTAACTTGCAGGC TTCTGGAATCTGCTTGTTAGCTGTTGACGAAGCTCATTGCATATCAGAATGGGGCCATGA TTTCAGGACAGAGTACAAGCAGCTGCATTCATTGCGCAACCTTCTTGTGGGTGTTCCCTT TGTTGCTTTAACTGCTACAGCCACAGAAAGTTACCTTCCTTTTGAGGGTGTCTAATGCTA CTATTTTTTGTCCTTTGCTTAAAGGGTCAGGGTGAGATGAATAGTTTTAGAACATTTAAG TCCTCTAAATATAATAGCAATGGGCATTAGATTCTCCCCATAGTGGCGAGACAAGGCGTT GGACTGCCGCTTGGACGCTTAGGCGTTGGACCACCGCCTGGACGCCTAGGCGACTTCTTT AAAACACTGATTAGGTGTTTGATTGTATCTGGATATCATCAAAGAGATGATGACATACTG TTGTATCCCTAGTGTCATAGTAGCACATCTAGTCTCTAAAAGCAGCCAAACCAGCCAGAC AAACATACAAATATCATAACTATGTGTTGTGTAAATTGTCAGGGCGAGTGAGCTCTCTTT ATTTGGGTGATGGTGGCGGCGGTGTGTGTTTTGGATGTGGGTGTGCGTGTGTGTGTGGGG GGGGGGACTGGTTTTCAAAACTGGTCCAATATTACGCTCTCATTCTCTTCTTTCATAATA ATTTTGTAGGGTACGCCAAGATATTTCTACTTCCTTGGTTCTTTGCAGTCCTCACGTGGT GGTTGGTTCATTTGATCGTCATAACCTTTTCTATGGTGTGAAAACATGCAACCGATCTAT GTCCTTTATAAGTGAACTTGTGAAAGATGTTTCAAAGAGGAGTGATGTGGGTGAGTCAAC AATAATATATTGTACGACCATCCGGGACACAGAACAGGTTCATGAGGCTTTAGTTACTTC TGGAATCAAGACTGGAATCTATCATGGTCAAATGGGCAGCAGAGCTAGAGAGGAATCCCA TAGATCCTTCATTAGGGATGAAGTTCTTGTAATGGTGGCAACTATAGCTTTTGGGATGGG TATTGATAAGCCTGATGTTAGATGTGTAATACACTATGGATGTCCAAAGAGCCTAGAGTC TTACTACCAGGAAAGTGGGCGTTGTGGAAGAGATGGACTGCCTTCAATCTGCTGGCTATA TTACCAAAGAAGTGATATTACAAAAGCTGATTTCTATTGTTCTGAGGCAAAAAATGAAAC CCAGAGGAAAGCAATCATGGATTCCTTCATGGCAGCACAAAAATATTGCTTGCTTGCTAC ATGCCGTAGGAGGTTCTTATTGCAATATTTTGGTGAAGAATGGAACATTGACTGTGGTAA TTGTGATAATTGCACAGCAGTGAAAAATGAGAGGGATTTGTCAAAAGAAGTCTTTTTGTT GCTGTCCTGCATCAAATCTTGTGGAGGACGCTGGGGCCTCAATTTACCTATTGATGTTCT CCGTGGCTCACGAGCCAAGAAGATTGTTGACAACAATTATGATAAACTACAAATGCATGG GCGTGGTAAAGATTATTCGTCAAACTGGTGGAAAGCACTTGGTGGTCTTCTTATAGCACA TGATTATTTGAAGGAGACTGTTCGTGATACATTTAGATTTGTCAGTGTCAGTCCAAAAGG GGTCAAGTTTCTCTCTACTGCTGATAAAATAGATGGAGCACCACTGGTATTTCAGCTGAC TGCAGAGATGATTGAACTAGAGGAGCACGGTAGTTCACATCATAAAGAAGGTGGTTTGAA TCTTGTGCCAACATTAGAATCTGAAAAATTTTCTGAGGATGAATCAAAACTCTATCAAAG GCTCCTGAATGTTAGGATGAAGATTGCTCAAGATATTGGCACTGCTCCGTATGCTGTATG TGGCGATCAGACAATAAGAAACTTTGCAAAGATGAGACCTTCTACTGGAGCTAGACTTGC TAATATCGATGGTGTCAACCAGCATTTTATTTCACGTTTCAGTAACATTTTCATCCAAAA TATTGCGGAATTGTCGAAGGAGTTAAACCTCCCGTTGGATAATTCACCATTTCCACCACC ACCACCAACAAATCCAGCTGCAGAAAATATTGCTGGTATACCAAAACCTGTACAAAACAA TCTTCCTGGGATCTTGGGTGATGCAAAGCTGACTGCATGGGAATTGTGGCATAAGCAGGA GTACTCATTCCTGAAAATTGCTTATTTCCGCAGAGCAGTGCCAATAAAAGAGCAAACAGT TATTGCGTACATTCTTGATGCTGCTCGAGAAGGATGTGAGATGGACTGGAGTAGGTTTTG CAGGGAAGTAGGGCTGACACCTGATATAGCCACCGCAATTCGTCTTGCAATCTCAAAGGT TGGATCACGTGAGAAAATGAAGCCAATCAAAGAGGAGCTCCCAGAGAATGTAACTTATGA CATGATCAAGACATTCCTGACTATTGAGGGGTGTGGATTGTCAGAGCAAGTCTTTGGTAA CGGTACCGCTGACGGTGTCTCTAGTAGAATAGCAGAGTCACCAATATCTTCCTGCCATGC AAGTGAAGCAGGCGGAAATGGTGTCCCAGCAGCGGCAGAGGCCAGTGATGCAAACCCTTC AGCAAAGAGAGGTCAAACTGTTTGTGCTGAGGAGCCAGCAACAAAACTGCAAAGGACATA CGAGCATGGAGCTGAGTTAACTGGCACGGCGACTGCTACTGTAGATTCTGTGCTAGATCT GGTTGCGAGCTGCAATGGGGTATCGCTGGAGGATGTTGCCAAGCACTTCAAGGGATCCAA GAGAGAATCGGTCCTGGAGATATTGGAGGGCCTTGAATCTGAATTCACAATTTACAAGAA AAACGGGAACTACATGGTCCTGTGACAAACTTGCCCGCGTAGTCTGGGAAGGGGATATGC CTCAGCTGTGTGTGTATATATATATATCTATACGATGGTGGGTGACTTACTGACTTTGGA CTATGGTAGCAAGGTTGTTGGCTGGTGTGCATGTGCTCATTTTGGGGATTGGGCAGAACT AGCAGATGTACGAACGTGTGTGTTTGGAGCTGGGATCCTTTCT