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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022421_T022
CDS Infomation

cds chromosome:B73_RefGen_v4:7:177324207:177325793:-1 gene:Zm00001d022421 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence

ATGTCGTGGTTCGGGCACCACCACCACAACCAGCCGGCTCCCCCGGCGTCGGGCCCCAAC
CAGGTGTTCAAGATCTTCTGCCGCGCCAACGAGAACTACTGCCTGGCCGTCCGCGACGGC
GCCGTCGTGCTGGCCCCGGTCAACCCCAAGGACGACCACCAGCACTGGTACAAGGACATG
CGCTTCAGCACCCGGGTCAAGGACGAGGAAGGCATGCCGGCGTTCGCGCTCGTCAACAAG
GTCACCGGCGAGGCGCTCAAGCACTCCACGGGGCAGGGCCACCCCGTCAAGCTCGTGCCC
TACAACCCGGACTACCAGGACGAGTCCGTGCTCTGGACCGAGAGCCGCGACGTCGGCAAC
GGCTTCCGCTGCGTCCGCATGGTCAACAACATCTACCTCAACTTCGACGCCTTCCACGGC
GACAAGGCCCACGGCGGCGTCCATGACGGTACCGAGATCGTGCTCTGGAAGTGGTGCGAG
GGCGACAACCAGCGCTGGAAGATCCTCCCTTGGTGA

Peptide Sequence

PEP ID

Zm00001d022421_P022
PEP Infomation

pep chromosome:B73_RefGen_v4:7:177324207:177325793:-1 gene:Zm00001d022421 transcript:Zm00001d022421_T022 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence

MSWFGHHHHNQPAPPASGPNQVFKIFCRANENYCLAVRDGAVVLAPVNPKDDHQHWYKDM
RFSTRVKDEEGMPAFALVNKVTGEALKHSTGQGHPVKLVPYNPDYQDESVLWTESRDVGN
GFRCVRMVNNIYLNFDAFHGDKAHGGVHDGTEIVLWKWCEGDNQRWKILPW

Transcript Sequence

Transcript ID

Zm00001d022421_T022
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:177324207:177325793:-1 gene:Zm00001d022421 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence

GCACCACCACCGTCACTCAACACAGCACAGGCAGCTCGAGAGAGAGAGAGAGAGAAAGAT
GTCGTGGTTCGGGCACCACCACCACAACCAGCCGGCTCCCCCGGCGTCGGGCCCCAACCA
GGTGTTCAAGATCTTCTGCCGCGCCAACGAGAACTACTGCCTGGCCGTCCGCGACGGCGC
CGTCGTGCTGGCCCCGGTCAACCCCAAGGACGACCACCAGCACTGGTACAAGGACATGCG
CTTCAGCACCCGGGTCAAGGACGAGGAAGGCATGCCGGCGTTCGCGCTCGTCAACAAGGT
CACCGGCGAGGCGCTCAAGCACTCCACGGGGCAGGGCCACCCCGTCAAGCTCGTGCCCTA
CAACCCGGACTACCAGGACGAGTCCGTGCTCTGGACCGAGAGCCGCGACGTCGGCAACGG
CTTCCGCTGCGTCCGCATGGTCAACAACATCTACCTCAACTTCGACGCCTTCCACGGCGA
CAAGGCCCACGGCGGCGTCCATGACGGTACCGAGATCGTGCTCTGGAAGTGGTGCGAGGG
CGACAACCAGCGCTGGAAGATCCTCCCTTGGTGAACGAACGAAAGAAACTACTAGCTGGT
ACCCTAATAATAATTCTGCTGGCTGCGGCGATCCCAAAATAAAAGAGGCCGGGTGCGATG
CATCTCGGACTTCTCGAGTGGTGTTTGCGTCAGACAGCCAGCCACTGTGGGGCTAGTGTT
CCAACATTTGTCAGCCTGCTTGCGCGAGGAAGGGGGGTCACTGACTCAAGAGAAGGGCCT
GGTCATAGGCTGCTGCATTATGAATTTCTGATGATGTCTTATGTCTGTACTCTGAATCAA
CTATGTATGAGATCTCATCTCCTTTCTCC