Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d022396_T018
CDS Infomation	cds chromosome:B73_RefGen_v4:7:176688361:176696275:-1 gene:Zm00001d022396 gene_biotype:protein_coding transcript_biotype:protein_coding description:binding
Sequence	ATGTCCCCGCCGTTCGTGTTCCCCTCGACCCTGCGGGATCTGGAGCTGGACACCGACGGA GACAGAGACGAGGAGCCCTCGCTCCGGCCGCAGAACCCCGTCGCCGTCGCCACGCTCCGC GCTGCCGACCTCGAGGAGTTCGTCAAGGGTGCATCATTTGATCTTTCTGATAAGGAGCTC TTCTGCATTGAGGAACAGGAGGTGTTTGATGCCATCTACTCTATCGTGCGTGATTTCAAT TGCCTACCCCCAGCCCTTAAGTTTAACATTGTTGAGACCTTGCGCTCCAACCTCAGTGTC CTTCTACCCAGCATAGACTCACTTTCCCGGGCATCCATGTCATCCCCTTCTGATGCTACC GAAATCACTGACCGCATTGCCTCACACCGCAATGCCCTCAAGATCTACTCCTTCTTTCTC ATTTCCATTGTTCTCACCGCGGAAGCTGGCGCTGAAAGCTGCACAGCGGCTAAGGCAACA GCACATGGTCGAAAGAAGAACCATATATATTCTTGGAACTGGGAAGCACAAAGAGGCAGG ATCATGAGTCTAGTCGCTAATTCTCTTGAAGCTAACCTTTCGCTACTTTTTGGTCCTGGA GGAACCGATGAACGATATCTCTCTTTTGTTTCGAAGTGTACTTTTGTTCTCTGTGAAAAT CAAAATGTGTTAAAAGATGAGGATACAAGAAATGGCCTGTGCCGGATAATTGGAGCAATT GCCACGAAGCATCAGAGGATTTCTCAAATCAGTGCATCTGTTTCACATCTAATACACAAA TTTGATTTCACTGTTCCTCATCTTGCGGAAGCAGTTGCTTCTGCGGAGAAAAAGTTTGGT GATGGAAGCCTTGCAATTTCCCTGATTAGGGAAATAGGTCGGGCTGATCCAAAAGAATAC ACGAGAGATAGTGTTGGTGCGGATAATGTTGGGAGATTCCTTGTAGAACTTGCAGACCGC TTGCCAAAACTTATGTCAACCAACATTGGTGTTCTGATACCTCACTTTGGTGGTGAGTCA TATAAGATCAGAAATGCTCTTGTTGGAGTTTTGGGAAAGCTGGCTGCAAAGGCTTTCAAG GATGTTGAGGGTGATAGCAATGCTCGGCTTCGAAGTAAGCAGGCTATGCTGGAGATTTTG ATTGAGCGCTGTAGGGATGTGTCAGCATACACAAGGAGTCGTGTGCTTCAGGTGTGGTCT GAGCTTTGTGAAGAAAATTCTATTTCAATTGGCCTGTGGAATGAAGTGGCTTCCGTTGCT TCAGGGCGACTGGAGGACAAAAGTGCTATTGTGAGAAAATCAGCATTACAGCTTCTTATA ACAATGCTGCAACACAACCCTTTTGGGCCTCAGTTAAGGACTGCAACCTTTGAGGCAACT CTAGAAAAGTACAAGGAAAAATTACAAGGAATGGAGCCTTCAAATTCAGACAAAGATGAG GCCGCAAATGATAGTTCGCCTGGTGAAGTGATCATGGGGCAAGATGAAAGTGTCAGTGAT AGCTGTTTAGCATCAAGTCAGGATCAAAATGACCGTGATGCTACGATTGTGGATATAACA AACTTGGAACAAATAAGAGCTTTAGTTGCTTCACTTGAAGCTGGTCTGCGGTTTTCAAAG TGTATAACTTCGTTAATGCCAATTCTTGTTCAGTTGTTGGCGTCATCCTCAGCTACTGAT GTTGAGAACACCATCCTTTTACTGATGAGATGCAGACAGTTTCAGATCGAAGGATCAGAA GCAGCACTCAGGAAAATATGGTATGGAGCTGCAGATAAAGCTATAAGCACCATCTATACC CTACACCCTGCACCTGAACTTTTTGCTACTGAGACTGCAAAGAAGTCTCTCAGTTCTGTA TTCAGCGTTTTAGGAACAAATGATGTGTCAAATGGAGATGAAGCTCAGAATGGTGCCTCT CTGTCATCAGTATCACCTTCAAAGCTGGGTAGATTTCTTTTTGTTATTAGCCATATAGCA CTAAATCATTTGGTGTACATTGAGAATTCTGTTAGGAAAATTCAGAAACAGAAACGGAAG AATGAAAAATCTCAGCCCACCACTGAGGATCTCCAACCTGACGTGTCTAAAAGTTTGGAG GCACAAGGCATAAATGCCGAACTGGGACTTAGTGCAACCATAGATATTGCAATCGAGTCC CTTGCTGAAAGAGCAGAAAAGGAAATTGTTTGCTGTTCTTCTGAAAAGAATCTCATAGGA CATTGTGGGCCATTTCTCTCAAAACTCTGCAGGAATCTTGCATTGCTGCAAAAGTTCCCA GACCTTCAAGCTTCTGCAATGCTTGCTCTTTGCAGGCTAATGATCATTGATGCAGAGTTC TGCGAAGCAAATCTTCAAATCCTGTTTACTGTTGCTGAGAGTGCGCCTTCTGAAACTGTC CGATCCAATTGCACTATAGCCCTTGGTGATTTAGCAGTTCGCTTCCCAAATCTCTTAGAT CCTTGGACAGAGTATATATATGCCCGGTTACGTGATCCTTCAGTGTCTGTGAGGAAGAAT GCTGTGCTGGTCATTTCTCATCTTATATTGAATGATATGATGAAGGTTAAAGGGTATATA AATGAAATGGCTGTAAGAATAGAAGATAAAGATGAGAGGATATCAAGCCTGGCGAAACTC TTCTTTCACGAGTTGTCAAAGAAAGGAAGCAACCCAATTTATAATCTTCTTCCGGATATC TTGGGTAGACTATGCAATCAACACCTCAAAGAAGAAACATTTTGCAATATTATGCAGTTC TTAATCAACTCAATTAAGAAGGACAAACAAATGGAAGCTCTTGTGGATAAGCTGTGCAAT AGGTTTGCTGGAGTAAATGATGTCAGACAGTGGGAGTATATTTCTTATTGCCTTTCTCAG CTAACCTTCACTGAAAAGGGCCTGAAAAAACTCATTGATAATTTTAAGATGTTTGAACAT GCATTATCTGAAGATTCTGTGATGAACCACTTCAGAAGCGTAATATCAAAGTGCAAGAAG TTTGCGAAACCTGAGCTAAAAATTTGCATTGAGGAATTTGAGGAGAAACTTAGCAAGGTT CATCAGGAAAAGAAAGAGCAGGAGGAAACAACAAAAAATGCTGAGGCACACAGACAGAGA ATTGATTCGCTTGATGAATTTCTGGTTACTAAGGAAGTTAGTGAGAACAGTGGGAATTCT GCTGAAGATGAAACTAGCGAGGTAGTTGATCCTTCTGTGGATAGCAGCACGGAACATATG GAGAACACGCCAGAATGCAGTGTCAATACTAGTGCTGAGAATTCTCAGACAACAGCCCCA CTTACAGAATCAGAAGGTGGCGGTGAAGAGATTCAATCCGCACAACCTGTTAGCAAAGGC ATGTCACGGTTAAGGGCAAAGAAAACCAGAGATCCTGTTGTAGATCCTTCGGTGGACCGC AGCACCGAATATAAGGGGAACACGCCAGAGCACAGTGCGGATACTAGTACGGAGAATTCT CAGACATCAGTCCCACTTACAGGAACAGAAGGTGGCAGCGAAGAGATTCAATCCACACAA CCTGTTGGCAAAGGCGTGTCGCGGTCAAGGGCAAGGAAAACCAGAGACCCCGTTGTAGAG GACTCAGCAGCTCCAGTGAGACGCGCCACGCGTTCAACCAGAAGACAAGGAAGCTGA

Peptide Sequence

PEP ID	Zm00001d022396_P018
PEP Infomation	pep chromosome:B73_RefGen_v4:7:176688361:176696275:-1 gene:Zm00001d022396 transcript:Zm00001d022396_T018 gene_biotype:protein_coding transcript_biotype:protein_coding description:binding
Sequence	MSPPFVFPSTLRDLELDTDGDRDEEPSLRPQNPVAVATLRAADLEEFVKGASFDLSDKEL FCIEEQEVFDAIYSIVRDFNCLPPALKFNIVETLRSNLSVLLPSIDSLSRASMSSPSDAT EITDRIASHRNALKIYSFFLISIVLTAEAGAESCTAAKATAHGRKKNHIYSWNWEAQRGR IMSLVANSLEANLSLLFGPGGTDERYLSFVSKCTFVLCENQNVLKDEDTRNGLCRIIGAI ATKHQRISQISASVSHLIHKFDFTVPHLAEAVASAEKKFGDGSLAISLIREIGRADPKEY TRDSVGADNVGRFLVELADRLPKLMSTNIGVLIPHFGGESYKIRNALVGVLGKLAAKAFK DVEGDSNARLRSKQAMLEILIERCRDVSAYTRSRVLQVWSELCEENSISIGLWNEVASVA SGRLEDKSAIVRKSALQLLITMLQHNPFGPQLRTATFEATLEKYKEKLQGMEPSNSDKDE AANDSSPGEVIMGQDESVSDSCLASSQDQNDRDATIVDITNLEQIRALVASLEAGLRFSK CITSLMPILVQLLASSSATDVENTILLLMRCRQFQIEGSEAALRKIWYGAADKAISTIYT LHPAPELFATETAKKSLSSVFSVLGTNDVSNGDEAQNGASLSSVSPSKLGRFLFVISHIA LNHLVYIENSVRKIQKQKRKNEKSQPTTEDLQPDVSKSLEAQGINAELGLSATIDIAIES LAERAEKEIVCCSSEKNLIGHCGPFLSKLCRNLALLQKFPDLQASAMLALCRLMIIDAEF CEANLQILFTVAESAPSETVRSNCTIALGDLAVRFPNLLDPWTEYIYARLRDPSVSVRKN AVLVISHLILNDMMKVKGYINEMAVRIEDKDERISSLAKLFFHELSKKGSNPIYNLLPDI LGRLCNQHLKEETFCNIMQFLINSIKKDKQMEALVDKLCNRFAGVNDVRQWEYISYCLSQ LTFTEKGLKKLIDNFKMFEHALSEDSVMNHFRSVISKCKKFAKPELKICIEEFEEKLSKV HQEKKEQEETTKNAEAHRQRIDSLDEFLVTKEVSENSGNSAEDETSEVVDPSVDSSTEHM ENTPECSVNTSAENSQTTAPLTESEGGGEEIQSAQPVSKGMSRLRAKKTRDPVVDPSVDR STEYKGNTPEHSADTSTENSQTSVPLTGTEGGSEEIQSTQPVGKGVSRSRARKTRDPVVE DSAAPVRRATRSTRRQGS

Transcript Sequence

Transcript ID	Zm00001d022396_T018
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:176688361:176696275:-1 gene:Zm00001d022396 gene_biotype:protein_coding transcript_biotype:protein_coding description:binding
Sequence	GAAACACTCGCCACTCTTCGCCTCCCGTTCCCCAGCCCAGACCCGAAGCCCTGCGCCTCC CCCTCCGCCGCTCGCCGGGCGAGATGTCCCCGCCGTTCGTGTTCCCCTCGACCCTGCGGG ATCTGGAGCTGGACACCGACGGAGACAGAGACGAGGAGCCCTCGCTCCGGCCGCAGAACC CCGTCGCCGTCGCCACGCTCCGCGCTGCCGACCTCGAGGAGTTCGTCAAGGGTGCATCAT TTGATCTTTCTGATAAGGAGCTCTTCTGCATTGAGGAACAGGAGGTGTTTGATGCCATCT ACTCTATCGTGCGTGATTTCAATTGCCTACCCCCAGCCCTTAAGTTTAACATTGTTGAGA CCTTGCGCTCCAACCTCAGTGTCCTTCTACCCAGCATAGACTCACTTTCCCGGGCATCCA TGTCATCCCCTTCTGATGCTACCGAAATCACTGACCGCATTGCCTCACACCGCAATGCCC TCAAGATCTACTCCTTCTTTCTCATTTCCATTGTTCTCACCGCGGAAGCTGGCGCTGAAA GCTGCACAGCGGCTAAGGCAACAGCACATGGTCGAAAGAAGAACCATATATATTCTTGGA ACTGGGAAGCACAAAGAGGCAGGATCATGAGTCTAGTCGCTAATTCTCTTGAAGCTAACC TTTCGCTACTTTTTGGTCCTGGAGGAACCGATGAACGATATCTCTCTTTTGTTTCGAAGT GTACTTTTGTTCTCTGTGAAAATCAAAATGTGTTAAAAGATGAGGATACAAGAAATGGCC TGTGCCGGATAATTGGAGCAATTGCCACGAAGCATCAGAGGATTTCTCAAATCAGTGCAT CTGTTTCACATCTAATACACAAATTTGATTTCACTGTTCCTCATCTTGCGGAAGCAGTTG CTTCTGCGGAGAAAAAGTTTGGTGATGGAAGCCTTGCAATTTCCCTGATTAGGGAAATAG GTCGGGCTGATCCAAAAGAATACACGAGAGATAGTGTTGGTGCGGATAATGTTGGGAGAT TCCTTGTAGAACTTGCAGACCGCTTGCCAAAACTTATGTCAACCAACATTGGTGTTCTGA TACCTCACTTTGGTGGTGAGTCATATAAGATCAGAAATGCTCTTGTTGGAGTTTTGGGAA AGCTGGCTGCAAAGGCTTTCAAGGATGTTGAGGGTGATAGCAATGCTCGGCTTCGAAGTA AGCAGGCTATGCTGGAGATTTTGATTGAGCGCTGTAGGGATGTGTCAGCATACACAAGGA GTCGTGTGCTTCAGGTGTGGTCTGAGCTTTGTGAAGAAAATTCTATTTCAATTGGCCTGT GGAATGAAGTGGCTTCCGTTGCTTCAGGGCGACTGGAGGACAAAAGTGCTATTGTGAGAA AATCAGCATTACAGCTTCTTATAACAATGCTGCAACACAACCCTTTTGGGCCTCAGTTAA GGACTGCAACCTTTGAGGCAACTCTAGAAAAGTACAAGGAAAAATTACAAGGAATGGAGC CTTCAAATTCAGACAAAGATGAGGCCGCAAATGATAGTTCGCCTGGTGAAGTGATCATGG GGCAAGATGAAAGTGTCAGTGATAGCTGTTTAGCATCAAGTCAGGATCAAAATGACCGTG ATGCTACGATTGTGGATATAACAAACTTGGAACAAATAAGAGCTTTAGTTGCTTCACTTG AAGCTGGTCTGCGGTTTTCAAAGTGTATAACTTCGTTAATGCCAATTCTTGTTCAGTTGT TGGCGTCATCCTCAGCTACTGATGTTGAGAACACCATCCTTTTACTGATGAGATGCAGAC AGTTTCAGATCGAAGGATCAGAAGCAGCACTCAGGAAAATATGGTATGGAGCTGCAGATA AAGCTATAAGCACCATCTATACCCTACACCCTGCACCTGAACTTTTTGCTACTGAGACTG CAAAGAAGTCTCTCAGTTCTGTATTCAGCGTTTTAGGAACAAATGATGTGTCAAATGGAG ATGAAGCTCAGAATGGTGCCTCTCTGTCATCAGTATCACCTTCAAAGCTGGGTAGATTTC TTTTTGTTATTAGCCATATAGCACTAAATCATTTGGTGTACATTGAGAATTCTGTTAGGA AAATTCAGAAACAGAAACGGAAGAATGAAAAATCTCAGCCCACCACTGAGGATCTCCAAC CTGACGTGTCTAAAAGTTTGGAGGCACAAGGCATAAATGCCGAACTGGGACTTAGTGCAA CCATAGATATTGCAATCGAGTCCCTTGCTGAAAGAGCAGAAAAGGAAATTGTTTGCTGTT CTTCTGAAAAGAATCTCATAGGACATTGTGGGCCATTTCTCTCAAAACTCTGCAGGAATC TTGCATTGCTGCAAAAGTTCCCAGACCTTCAAGCTTCTGCAATGCTTGCTCTTTGCAGGC TAATGATCATTGATGCAGAGTTCTGCGAAGCAAATCTTCAAATCCTGTTTACTGTTGCTG AGAGTGCGCCTTCTGAAACTGTCCGATCCAATTGCACTATAGCCCTTGGTGATTTAGCAG TTCGCTTCCCAAATCTCTTAGATCCTTGGACAGAGTATATATATGCCCGGTTACGTGATC CTTCAGTGTCTGTGAGGAAGAATGCTGTGCTGGTCATTTCTCATCTTATATTGAATGATA TGATGAAGGTTAAAGGGTATATAAATGAAATGGCTGTAAGAATAGAAGATAAAGATGAGA GGATATCAAGCCTGGCGAAACTCTTCTTTCACGAGTTGTCAAAGAAAGGAAGCAACCCAA TTTATAATCTTCTTCCGGATATCTTGGGTAGACTATGCAATCAACACCTCAAAGAAGAAA CATTTTGCAATATTATGCAGTTCTTAATCAACTCAATTAAGAAGGACAAACAAATGGAAG CTCTTGTGGATAAGCTGTGCAATAGGTTTGCTGGAGTAAATGATGTCAGACAGTGGGAGT ATATTTCTTATTGCCTTTCTCAGCTAACCTTCACTGAAAAGGGCCTGAAAAAACTCATTG ATAATTTTAAGATGTTTGAACATGCATTATCTGAAGATTCTGTGATGAACCACTTCAGAA GCGTAATATCAAAGTGCAAGAAGTTTGCGAAACCTGAGCTAAAAATTTGCATTGAGGAAT TTGAGGAGAAACTTAGCAAGGTTCATCAGGAAAAGAAAGAGCAGGAGGAAACAACAAAAA ATGCTGAGGCACACAGACAGAGAATTGATTCGCTTGATGAATTTCTGGTTACTAAGGAAG TTAGTGAGAACAGTGGGAATTCTGCTGAAGATGAAACTAGCGAGGTAGTTGATCCTTCTG TGGATAGCAGCACGGAACATATGGAGAACACGCCAGAATGCAGTGTCAATACTAGTGCTG AGAATTCTCAGACAACAGCCCCACTTACAGAATCAGAAGGTGGCGGTGAAGAGATTCAAT CCGCACAACCTGTTAGCAAAGGCATGTCACGGTTAAGGGCAAAGAAAACCAGAGATCCTG TTGTAGATCCTTCGGTGGACCGCAGCACCGAATATAAGGGGAACACGCCAGAGCACAGTG CGGATACTAGTACGGAGAATTCTCAGACATCAGTCCCACTTACAGGAACAGAAGGTGGCA GCGAAGAGATTCAATCCACACAACCTGTTGGCAAAGGCGTGTCGCGGTCAAGGGCAAGGA AAACCAGAGACCCCGTTGTAGAGGACTCAGCAGCTCCAGTGAGACGCGCCACGCGTTCAA CCAGAAGACAAGGAAGCTGATGGTGCAGCAAAGCGGCAGCTCAAGCCATTCCGTGCCGAT CTCGCCTCGAGGTCCCGGAGTACTGGACCACAGCAAAGCGGTGCCTGGACGTCTGGATCG GAGAGTTGGCTGGCTCTATCCTTTTTGCGTGATGCGTGTCGGTCTAGTTTTAGCTCGCTG ATTCCCGGACAGGCCAATAATGATCTCTCGTGAATCTGTCTAGGGGCAGTATGTTTAACT GCTCCATACGAGGAGCTCTTGTGTTTGGTTGTTGCAGTAGGTCGGCTTTCATATGGATTG TCTACTACAGACATTGCTCCCTTGGGGAGCGTATGTATAATATCTGGCCTGATCTTTTTG AGGCCTGATGACG