Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d022394_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:7:176671699:176674755:1 gene:Zm00001d022394 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGTCAAATGAAGCGATAGCCTTGTTTCACAGCATGAGGGAAGCTGGGCTGTGTCCGGAC AAGATAACCTTGGTCGGTGTCCTCTCATCCTGCGCAGCAGTTGGTGCACTGAAGCTTGGA GTTGAATTGGATACGTATGCCATGCGCAGAGGCCTCTACAACAATGTCTATGTAGGAACA GCCTTAGTGGACATGTATGCTAAGTGTGGAGATCTTGAGAAAGCCACGCATGTTTTTGGG AAGATGCCATTCAAAAATGAAGCCTCATGGAATGCATTAATCTGTGGACTTGCCTTCAAC GGTCGAGGCTATGATGCCATTCAGCAGTTTGAACTAATGAGAGATGAGAAAGGACTCCAA CCAGATGATATCACATTCATAGGTGTGCTTTCGGCTTGTGTACATGCTGGGCTACTCGAG TATGGCCGCCAGTTGTTCAATTCTCTGACACCTGTTTTTAAGATCATTCCTAGAATTGAG CACTACTCCTGCATTGTTGATTTGTTGGCACGTGCTGGTCATTTAGAAGAAGCATGGGAT TTTATTGAGGAAATGCCTGGCAAGGTAGATGCCGTCATGTTAGGCGCTTTGCTTGCTGCT TGCCGGAAATGCAAGAACACTGAGGTTGGTGAGAGGGTCATCAATAGGATTATGAAGCTG GAGCCATCAAACTCGTGGAACTACGTGGTGTCATCCAAGATTTATGCAACCTCAGATAAA ATGGATGAATCTGCAAGGATGATAGGGCTAATGAGGGAGAGGGGTGTCAACAAGACTCCA GGGTGCAGCTGGGTTGAGGTTAATGGAAAAGTTCTTGAATTCTATGCAAGCACTGAACCA CAGCATGGTGCGGAAGATATGTATCAACTCATGGGCGTACTGGTAAATGAGATGAGACTA AAGGGATATGTTCCAAACCTTGATCTGGTGTAG

Peptide Sequence

PEP ID	Zm00001d022394_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:7:176671699:176674755:1 gene:Zm00001d022394 transcript:Zm00001d022394_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MSNEAIALFHSMREAGLCPDKITLVGVLSSCAAVGALKLGVELDTYAMRRGLYNNVYVGT ALVDMYAKCGDLEKATHVFGKMPFKNEASWNALICGLAFNGRGYDAIQQFELMRDEKGLQ PDDITFIGVLSACVHAGLLEYGRQLFNSLTPVFKIIPRIEHYSCIVDLLARAGHLEEAWD FIEEMPGKVDAVMLGALLAACRKCKNTEVGERVINRIMKLEPSNSWNYVVSSKIYATSDK MDESARMIGLMRERGVNKTPGCSWVEVNGKVLEFYASTEPQHGAEDMYQLMGVLVNEMRL KGYVPNLDLV

Transcript Sequence

Transcript ID	Zm00001d022394_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:176671699:176674755:1 gene:Zm00001d022394 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	GCCGCCTCCACCAATACCACCGCCTTTGCCGCCGCCGCGCTCTCTACGCTCCTGTCGCGC TGCCGTTCCCTCGCCTCCGTCAAGCAGCTCCATGCCCACATCCTCGCACGTTCAAACAGC CCATTCCCCTACAATCATTTCCTCTCCAAACTCCTCTCCCTCTCCTGCTCCGCCTCTGCC TCCGCCGCCAACTATGCCCTCCTCCTCCTCTCCTCCCACCCGGCGCCCACCGCCTTCACC TACAATGTCACAATCCGCTTATTCGCCTCATCGCGCCCGGACACCTCCCTTCGCCTCTTC CTCAGCATGCTCCGCGCCGAGGTCCGCGTCCGACCCGACGCATACACCCTCCCTTTCCTC CTCCTCGCCGCGGCGCGCTGCCCGGCACCGGCCCTCGCCCGGTCCGCCCATGCTCTCCTC GAGAAGATCGGTCTCGGTGACCACGACCACACCGTCCACTCCCTCATCACCATGTACTCC TGCCTTGATGATCACCTCGCCGCGCGCAGGGTGTTCGACGGAATTTCCCACCGGGATGTC GTCTCTTGGAACTCGATGGTGAAGGCATACGAACGGGCAGGGATGGTGGCCGAGGTTGAA GGGATGTTGCGGTCGATGGTCACCGAGGGCGCAGTGGCACCCAATGGGGTGACTCTGGCG GTTGTGCTCACAGCTTGCAGGGACGCTGGCAATTTGGTGCTTGGGAGGTGGGTGGAGGAG TGGGTGAGGTCTGCGGGGATGGAGGTGGACTCGCTCATTGGGTCAGCACTTGTGGGGATG TATGAGAAGTGTGGAGAGATGGCAGAGGCACGGCGTGTGTTTGATGGCATCAGACACAAG GATGTCGTGGCATGGAATGCCATGATCACCGGCTGATGCAGGTATGCGCAAAATGGCATG TCAAATGAAGCGATAGCCTTGTTTCACAGCATGAGGGAAGCTGGGCTGTGTCCGGACAAG ATAACCTTGGTCGGTGTCCTCTCATCCTGCGCAGCAGTTGGTGCACTGAAGCTTGGAGTT GAATTGGATACGTATGCCATGCGCAGAGGCCTCTACAACAATGTCTATGTAGGAACAGCC TTAGTGGACATGTATGCTAAGTGTGGAGATCTTGAGAAAGCCACGCATGTTTTTGGGAAG ATGCCATTCAAAAATGAAGCCTCATGGAATGCATTAATCTGTGGACTTGCCTTCAACGGT CGAGGCTATGATGCCATTCAGCAGTTTGAACTAATGAGAGATGAGAAAGGACTCCAACCA GATGATATCACATTCATAGGTGTGCTTTCGGCTTGTGTACATGCTGGGCTACTCGAGTAT GGCCGCCAGTTGTTCAATTCTCTGACACCTGTTTTTAAGATCATTCCTAGAATTGAGCAC TACTCCTGCATTGTTGATTTGTTGGCACGTGCTGGTCATTTAGAAGAAGCATGGGATTTT ATTGAGGAAATGCCTGGCAAGGTAGATGCCGTCATGTTAGGCGCTTTGCTTGCTGCTTGC CGGAAATGCAAGAACACTGAGGTTGGTGAGAGGGTCATCAATAGGATTATGAAGCTGGAG CCATCAAACTCGTGGAACTACGTGGTGTCATCCAAGATTTATGCAACCTCAGATAAAATG GATGAATCTGCAAGGATGATAGGGCTAATGAGGGAGAGGGGTGTCAACAAGACTCCAGGG TGCAGCTGGGTTGAGGTTAATGGAAAAGTTCTTGAATTCTATGCAAGCACTGAACCACAG CATGGTGCGGAAGATATGTATCAACTCATGGGCGTACTGGTAAATGAGATGAGACTAAAG GGATATGTTCCAAACCTTGATCTGGTGTAGCACGTAATAAAGCATATTTCCTGTTCTTCT TGGAGCAAAAGGAATGACTTATGCTAATTCACAGGAGGAGGAAAATCGCAAAATGAAATA AACAGAGGAACGACAAGAACAGCAGCAGCCAACAATATGATGGGATACCATACTATAATA TAAAACGAAAAAGAGGGAACACCCAAATGCTAAACCTCAATAGCTGATACTCTTTGCCTG ATTTCAACTTCTTCCTTAATGCAGTGAACCATTTGCAGCGTGCTAAGCAATCGTTATTGA CAATTATTTACCTTCTCACTTGTTCAATAAAGTGTGCCGCATGGAATCTCTCATTTGGCT ATTGGGACCTTTTTATGGTCTACTTCCTATCACCACCACCAAGTCAGTTTGTTTGTAAGC TGGGAAGATAAGAGTCCAGTTACACCGTGTGGCTCCTTAAATACGCACATGATTTTTAAT GTTACAGGACAAGGTGAGGTTGGCAACTATTGATGGATCCTTACTTCTAGAGTTGCGCTG AAGCTATCTTTTGTTCGCTTGTTTTGTTCTTAGAATACTTTGTTTTGTGCTAATTTTGTT CATCCACTTCCTGCATATGGATACTAATGGGGAAGAGGGCAAGAAGAGCGTGGAGACGCA CAAGATCTACATCGCTGAAGCAGGTGCACCCTGGTATTGGAATCCCCTGCGAGGTCATGT CTGTCATGAACTCGCTCATCAACGACAACTTGCCGGCGAGGCTGCCAAGTTCATCCGCCA CAATAAGATGGGCACCATCACATCCCAGGACATCCAAGGGCATCAAGGCCGTCACCAAGT TCACCTCGTCTTTGTCTTCTTCTCCCGTGTGACTGTCTTCGTGTGAGTAACATGTTGGTT GGTCGGAGGCTTGGCTGTTGTGGTCTCGCGTAATTGCCGCGGTGGCTTTTTGGCAGAATG GAATGCTATGGTTATGTGAATGTTGATCTCTCAGCACTCCGTACACCTGCTTGCCACACT GTTTTGGCCATTGTGTCGGGGTCTAGATTGGGACTGACTTGAGAGTGTTTCAGGTCTGTT CAGTTGGGTGTTCTGGGGCCATGCAGTCTGATTCAGTTCAGCGTTTCCTTTATCGTACCT GCTCAATGAATCTAATACCAGAT