Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022367_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:7:176185596:176188604:1 gene:Zm00001d022367 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-glucosidase 44
Sequence

ATGCAGAGCTCCGTAAAGCTCGCGGTGCTTGCTCTTCTGCTAGCGGCAGCAGCTCACCAC
GGTCTGCTGCCGCTGCCGACGGCGCGATGCTACTGGCTCAACCCGGAGATCTACGACGCC
GGCGGGCTGAGCCGCCGCGCGTTCCCGGACGGCTTCGTCTTCGGGACGGCCGCGTCGGCG
TACCAGGTCGAGGGGATGGCCAAGCACGGCGGGCGGGGCCCCAGCATCTGGGACGCCTTC
ATAGAGGTTCCCGGGACCATCCCTAACAATGCCACCGCTGACGTGACGGTCGACGAGTAT
CATCGGTACAAGGAAGATGTGAACATAATGAAGAACATGGGCTTTGATGCGTACCGATTT
TCGATCTCTTGGTCGAGGATTTTCCCAGATGGAACTGGCAAGGTAAACCAGGAAGGAGTG
GATTACTACAACAGGCTCATAGATTACATGCTCCAGCAAGGTATCGCGCCGTATGCAAAT
CTCTACCATTATGACCTCCCATTGGCACTCCATGAACAGTACCTGGGCTGGCTTAGCCCA
AAGATTGTTCTGACCCAGCTGCACGCCGTGCCCAATCGAAGGGAGGCGTTTGCAGACTAC
GCCGAGTTCTGCTTCCACGCGTTCGGAGACAGGGTGAAGAACTGGTTTACCTTCAACGAG
CCGAGGTGCGTCGCTGCTCTGGGCTACGACAATGGCTTGCACGCACCGGGAAGGTGTTCC
GGGTGCCCCGCCGGAGGCAACTCCACCACGGAGCCGTACCTTGTCGCACACCATCTCATC
CTTTCTCATGCAGCTGCTGTCAGGCGATACCGCGACAAGTATCAGCTTCACCAGAAGGGG
AAGATTGGAATTCTCCTGGATTTCGTGTGGTACGAACCTTTCAGCGACAGCAATGCGGAC
CAGGCTGCAGCACAGCGAGCCAGGGACTTCCACCTAGGCTGGTTCCTTGACCCCATTGTA
CATGGACGGTACCCGTACTCGATGCAAGAGATTGCCAAAGACAGGCTACCGTTGTTCAGC
GATGAAGAAGCCAGGATGGTGAAAGGCTCTATAGACTATGTTGGCATCAACCACTACACT
TCTTTCTACATGAAGGACCCTGGGACATGGAACCTGACACCAGTCAGCTACCAGGATGAT
TGGCATGTTGGTTTTGTCTACGAACGAAATGGAGTTCCTATTGGCGCTCACGCAAACTCC
TACTGGCTGTACATTGTGCCGTGGGGCATCAACAAGGCTGTCAGCTATGTCAAGGAAACT
TACAAAAATCCTACAATGATCCTTGCTGAAAACGGAATGGACCAACCTGGTGATGTCAGT
ATTACTCAGGGTGTGCATGACACAGTAAGAATCCGTTATTACAGAGACTACATAACTGAG
CTCAAGAAGGCAATAGATGATGGTGCCAGAGTCATTGGGTACTTTGCGTGGTCGCTGCTT
GACAACTTCGAGTGGAGGCTTGGGTACACTTCGCGGTTTGGCTTGGTGTACGTGGACTAC
AAGACTCTGAAGAGGTACCCCAAGGATTCAGCTTTCTGGTTCAAGCATATGCTGTCCAAG
AAAAGGAGCTAG

Peptide Sequence

PEP ID

Zm00001d022367_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:7:176185596:176188604:1 gene:Zm00001d022367 transcript:Zm00001d022367_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-glucosidase 44
Sequence

MQSSVKLAVLALLLAAAAHHGLLPLPTARCYWLNPEIYDAGGLSRRAFPDGFVFGTAASA
YQVEGMAKHGGRGPSIWDAFIEVPGTIPNNATADVTVDEYHRYKEDVNIMKNMGFDAYRF
SISWSRIFPDGTGKVNQEGVDYYNRLIDYMLQQGIAPYANLYHYDLPLALHEQYLGWLSP
KIVLTQLHAVPNRREAFADYAEFCFHAFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCS
GCPAGGNSTTEPYLVAHHLILSHAAAVRRYRDKYQLHQKGKIGILLDFVWYEPFSDSNAD
QAAAQRARDFHLGWFLDPIVHGRYPYSMQEIAKDRLPLFSDEEARMVKGSIDYVGINHYT
SFYMKDPGTWNLTPVSYQDDWHVGFVYERNGVPIGAHANSYWLYIVPWGINKAVSYVKET
YKNPTMILAENGMDQPGDVSITQGVHDTVRIRYYRDYITELKKAIDDGARVIGYFAWSLL
DNFEWRLGYTSRFGLVYVDYKTLKRYPKDSAFWFKHMLSKKRS

Transcript Sequence

Transcript ID

Zm00001d022367_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:176185596:176188604:1 gene:Zm00001d022367 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-glucosidase 44
Sequence

ACACAGAGACAAGTCACTGTCTCGAAGTGTCGGTTTCGAACTCGAACAGGGCAGGTGCTC
GCCGTCCCTCTTTTACTAGCCTTCGGAAAGCGCGGCCTGTGTCTCCGGCCTTTGCCACTT
CCACAGGGAGTCCGGGGCCATGCAGAGCTCCGTAAAGCTCGCGGTGCTTGCTCTTCTGCT
AGCGGCAGCAGCTCACCACGGTCTGCTGCCGCTGCCGACGGCGCGATGCTACTGGCTCAA
CCCGGAGATCTACGACGCCGGCGGGCTGAGCCGCCGCGCGTTCCCGGACGGCTTCGTCTT
CGGGACGGCCGCGTCGGCGTACCAGGTCGAGGGGATGGCCAAGCACGGCGGGCGGGGCCC
CAGCATCTGGGACGCCTTCATAGAGGTTCCCGGGACCATCCCTAACAATGCCACCGCTGA
CGTGACGGTCGACGAGTATCATCGGTACAAGGAAGATGTGAACATAATGAAGAACATGGG
CTTTGATGCGTACCGATTTTCGATCTCTTGGTCGAGGATTTTCCCAGATGGAACTGGCAA
GGTAAACCAGGAAGGAGTGGATTACTACAACAGGCTCATAGATTACATGCTCCAGCAAGG
TATCGCGCCGTATGCAAATCTCTACCATTATGACCTCCCATTGGCACTCCATGAACAGTA
CCTGGGCTGGCTTAGCCCAAAGATTGTTCTGACCCAGCTGCACGCCGTGCCCAATCGAAG
GGAGGCGTTTGCAGACTACGCCGAGTTCTGCTTCCACGCGTTCGGAGACAGGGTGAAGAA
CTGGTTTACCTTCAACGAGCCGAGGTGCGTCGCTGCTCTGGGCTACGACAATGGCTTGCA
CGCACCGGGAAGGTGTTCCGGGTGCCCCGCCGGAGGCAACTCCACCACGGAGCCGTACCT
TGTCGCACACCATCTCATCCTTTCTCATGCAGCTGCTGTCAGGCGATACCGCGACAAGTA
TCAGCTTCACCAGAAGGGGAAGATTGGAATTCTCCTGGATTTCGTGTGGTACGAACCTTT
CAGCGACAGCAATGCGGACCAGGCTGCAGCACAGCGAGCCAGGGACTTCCACCTAGGCTG
GTTCCTTGACCCCATTGTACATGGACGGTACCCGTACTCGATGCAAGAGATTGCCAAAGA
CAGGCTACCGTTGTTCAGCGATGAAGAAGCCAGGATGGTGAAAGGCTCTATAGACTATGT
TGGCATCAACCACTACACTTCTTTCTACATGAAGGACCCTGGGACATGGAACCTGACACC
AGTCAGCTACCAGGATGATTGGCATGTTGGTTTTGTCTACGAACGAAATGGAGTTCCTAT
TGGCGCTCACGCAAACTCCTACTGGCTGTACATTGTGCCGTGGGGCATCAACAAGGCTGT
CAGCTATGTCAAGGAAACTTACAAAAATCCTACAATGATCCTTGCTGAAAACGGAATGGA
CCAACCTGGTGATGTCAGTATTACTCAGGGTGTGCATGACACAGTAAGAATCCGTTATTA
CAGAGACTACATAACTGAGCTCAAGAAGGCAATAGATGATGGTGCCAGAGTCATTGGGTA
CTTTGCGTGGTCGCTGCTTGACAACTTCGAGTGGAGGCTTGGGTACACTTCGCGGTTTGG
CTTGGTGTACGTGGACTACAAGACTCTGAAGAGGTACCCCAAGGATTCAGCTTTCTGGTT
CAAGCATATGCTGTCCAAGAAAAGGAGCTAGAGAATTGCAGACAAGAGGACCACTGGCTT
CACGTGTCATACAAAAGTTCACTCTGCAAATCCTCTTAGTATGTCAGATTTAGCTTAAGG
AACCGTGCAGACAATTGAGTCTCAAGGCTCGACATCTCTAGCTTCGTTAATTGTTGCAAG
GCAATAAATTGGTATCTTCGAAAA