Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d022305_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:7:174828216:174833556:-1 gene:Zm00001d022305 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDPK-related kinase 1
Sequence	ATGGGGCTCTGCCATGGCAAGCCGACGCAAATCCCGGAGGCCGAGGCTGAGGAGGATCCC CACGTAGCCTCCGGCGCGGGCGACGGCGGGGACGGGGCGACCTCGCCGTCGGCGGCGGCG CCCGCGGCGAAGCCAGGCACGCCGAAACAGCCCAAGTTCCCGTTCTACCTGCCGAGCCCG CTCCCGCCGTCGCCTGCCAAGCACATCCGCGCTCTCCTCGCGCGGCGGCACGGCTCGGTC AAGCCCAACGAGGTGTCCATTCCCGAGGGCGGCGAGCCGGAGCTCGGCCTGGACAAGAGC TTCGGCTTCTCCAAGCACTTCTTCGCTAAGTACGACCTCGGCGAGGAGATCGGCCGCGGC CACTTCGGCTACACGTGCTCCGCCAAGGCCAAGAAGGGCGAGCACAAGGGCCAGGACGTC GCCGTCAAAGTCATCCCCAAGGCCAAGATGACAACAGCTATCGCCATTGAAGATGTGAGA AGAGAAGTGAGAATACTGAGTTCTCTGACAGGTCACAGTAACCTAGTGCAGTTCTACGAT GCTTTTGAGGATGAAGATAACGTGTATATAGTTATGGAATTATGTAAAGGAGGTGAACTG CTGGACAGGATATTGGCTAGGGGTGGAAAGTACTCTGAAGAGGATGCAAAGGTTGTTATG GTACAAATTTTGGGTGTCGTATCATTTTGCCATCTTCAAGGTGTTGTTCATCGTGATCTG AAGCCGGAGAATTTCCTTTTCTCTTCAAAGGACGAAAACTCTCCCTTGAAGGTCATAGAT TTTGGCCTGTCTGACTTTGTGAAGCCAGACGAAAGACTAAATGATATTGTTGGAAGTGCA TACTACGTTGCTCCAGAGGTGCTCCACCGATCTTACGGCACTGAGGCAGATATGTGGAGC ATCGGAGTAATCGCCTACATCTTGCTATGCGGGAGCCGACCTTTCTGGGCGCGCACGGAG TCAGGAATCTTCCGGGCTGTCTTGAAGGCGGAACCGAGTTTCGATGAGGCCCCATGGCCC ACTCTCACAGCTGAAGCTAAAGATTTCGTAAAAAGGCTTCTTAACAAGGATTACCGCAAG AGGATGACAGCCGCGCAAGCTCTGAGCCATCCGTGGATCCGTAATGCTCAACAAGTGAAA GTTCCTTTGGATATGATCATCTATAAGCTAATGAGAGCTTACATCAGCTCGTCTTCGCTG CGGAAGTCCGCTTTGAGGGCCCTAGCCAAGACGCTGACGACGAACCAACTCTTTTATGTA AGGGAGCAGTTTGAACTGCTGGGCCCAAACAAGAACGGCTATATCTCATTGCAAAATCTG AAATCGGCTTTAGTGAAGAACTCCACTGACGCGATGAAGGACTCTAGGGTTGTTGACTTT GTTAACACGGTGTGCACTCTTCAGTACAGGAAGCTGGACTTCGAAGAGTTCGCCGCTTCC GCCATCAGCGTTTACCAGATGGAAGCCTTGGAGACGTGGGAGCAGCACGCGCGGCGTGCG TACGAGCTGTTCGACAAGGAAGGAAACCGGCCCATCGTGATCGAAGAGCTTGCATCGGAA CTCGGGCTTGGCCCGTCGGTGCCTCTCCACGTTGTCCTCCAGGACTGGATCCGGCACGCC GACGGGAAGCTGAGCTTCCTGGGGTTCATAAAGCTCTTGCACGGGGTGTCGTCGCGCTCG ATCCCCAAGGCCTAG

Peptide Sequence

PEP ID	Zm00001d022305_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:7:174828216:174833556:-1 gene:Zm00001d022305 transcript:Zm00001d022305_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDPK-related kinase 1
Sequence	MGLCHGKPTQIPEAEAEEDPHVASGAGDGGDGATSPSAAAPAAKPGTPKQPKFPFYLPSP LPPSPAKHIRALLARRHGSVKPNEVSIPEGGEPELGLDKSFGFSKHFFAKYDLGEEIGRG HFGYTCSAKAKKGEHKGQDVAVKVIPKAKMTTAIAIEDVRREVRILSSLTGHSNLVQFYD AFEDEDNVYIVMELCKGGELLDRILARGGKYSEEDAKVVMVQILGVVSFCHLQGVVHRDL KPENFLFSSKDENSPLKVIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWS IGVIAYILLCGSRPFWARTESGIFRAVLKAEPSFDEAPWPTLTAEAKDFVKRLLNKDYRK RMTAAQALSHPWIRNAQQVKVPLDMIIYKLMRAYISSSSLRKSALRALAKTLTTNQLFYV REQFELLGPNKNGYISLQNLKSALVKNSTDAMKDSRVVDFVNTVCTLQYRKLDFEEFAAS AISVYQMEALETWEQHARRAYELFDKEGNRPIVIEELASELGLGPSVPLHVVLQDWIRHA DGKLSFLGFIKLLHGVSSRSIPKA

Transcript Sequence

Transcript ID	Zm00001d022305_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:174828216:174833556:-1 gene:Zm00001d022305 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDPK-related kinase 1
Sequence	GCCCGCCCAGTTGTTTCTTTTAGTGCCGCCCCCATTCCGCTCTGATCCGAGCCTTTCGCT CAAAGCCTCCAGCTTTTCCAATTGTTTGGTCACTTCGGGAACCAAGGAATAAGTTCTTGC GCTGTGCGCGATAGAGAGCCTGATCCATCCTTCCCCATATCCTATTCCTGTGGCATTTCG CTGCGCTTGCGCCCTGTGCGTGGCCACTGCAGGGGAAGGATTTTGGCCTGGTTTCTCTCT TCTTGGGGTTCCAAGTTTTCGGGCGAGATCTTCGCCTCAAGGCGGTTCCTTGCTTTTCTG GTATTGGCGCGGCTCTTGTTGCTCCCCTACAAGTCCAAGGAAAGAATTTGGAGGCCGTGG GGGGGTCCCTTGCGACCGGTTCTGGTCGATTTCTCGGGCAGCTCCAGCTGAATTCAAGAT GCCGCTGTGACCCACCGCTGCCTGGTTTCTTGGAGGAAGGAAATTTTGCTTCAATTGGGC CGTTGGGCGTCGTTGAGCTAGACCCCTCCTCCAGCTCTTGATCCGGTCCATGGGGCTCTG CCATGGCAAGCCGACGCAAATCCCGGAGGCCGAGGCTGAGGAGGATCCCCACGTAGCCTC CGGCGCGGGCGACGGCGGGGACGGGGCGACCTCGCCGTCGGCGGCGGCGCCCGCGGCGAA GCCAGGCACGCCGAAACAGCCCAAGTTCCCGTTCTACCTGCCGAGCCCGCTCCCGCCGTC GCCTGCCAAGCACATCCGCGCTCTCCTCGCGCGGCGGCACGGCTCGGTCAAGCCCAACGA GGTGTCCATTCCCGAGGGCGGCGAGCCGGAGCTCGGCCTGGACAAGAGCTTCGGCTTCTC CAAGCACTTCTTCGCTAAGTACGACCTCGGCGAGGAGATCGGCCGCGGCCACTTCGGCTA CACGTGCTCCGCCAAGGCCAAGAAGGGCGAGCACAAGGGCCAGGACGTCGCCGTCAAAGT CATCCCCAAGGCCAAGATGACAACAGCTATCGCCATTGAAGATGTGAGAAGAGAAGTGAG AATACTGAGTTCTCTGACAGGTCACAGTAACCTAGTGCAGTTCTACGATGCTTTTGAGGA TGAAGATAACGTGTATATAGTTATGGAATTATGTAAAGGAGGTGAACTGCTGGACAGGAT ATTGGCTAGGGGTGGAAAGTACTCTGAAGAGGATGCAAAGGTTGTTATGGTACAAATTTT GGGTGTCGTATCATTTTGCCATCTTCAAGGTGTTGTTCATCGTGATCTGAAGCCGGAGAA TTTCCTTTTCTCTTCAAAGGACGAAAACTCTCCCTTGAAGGTCATAGATTTTGGCCTGTC TGACTTTGTGAAGCCAGACGAAAGACTAAATGATATTGTTGGAAGTGCATACTACGTTGC TCCAGAGGTGCTCCACCGATCTTACGGCACTGAGGCAGATATGTGGAGCATCGGAGTAAT CGCCTACATCTTGCTATGCGGGAGCCGACCTTTCTGGGCGCGCACGGAGTCAGGAATCTT CCGGGCTGTCTTGAAGGCGGAACCGAGTTTCGATGAGGCCCCATGGCCCACTCTCACAGC TGAAGCTAAAGATTTCGTAAAAAGGCTTCTTAACAAGGATTACCGCAAGAGGATGACAGC CGCGCAAGCTCTGAGCCATCCGTGGATCCGTAATGCTCAACAAGTGAAAGTTCCTTTGGA TATGATCATCTATAAGCTAATGAGAGCTTACATCAGCTCGTCTTCGCTGCGGAAGTCCGC TTTGAGGGCCCTAGCCAAGACGCTGACGACGAACCAACTCTTTTATGTAAGGGAGCAGTT TGAACTGCTGGGCCCAAACAAGAACGGCTATATCTCATTGCAAAATCTGAAATCGGCTTT AGTGAAGAACTCCACTGACGCGATGAAGGACTCTAGGGTTGTTGACTTTGTTAACACGGT GTGCACTCTTCAGTACAGGAAGCTGGACTTCGAAGAGTTCGCCGCTTCCGCCATCAGCGT TTACCAGATGGAAGCCTTGGAGACGTGGGAGCAGCACGCGCGGCGTGCGTACGAGCTGTT CGACAAGGAAGGAAACCGGCCCATCGTGATCGAAGAGCTTGCATCGGAACTCGGGCTTGG CCCGTCGGTGCCTCTCCACGTTGTCCTCCAGGACTGGATCCGGCACGCCGACGGGAAGCT GAGCTTCCTGGGGTTCATAAAGCTCTTGCACGGGGTGTCGTCGCGCTCGATCCCCAAGGC CTAGCCATGCGCCATCCATTACTCATCCCTGCGCATCCATATCCATCAAGAACCAAGGAG ATGATGACCGGTGGCTAAGCCAGTCTCTGGCTGGTGCGTGCGTGCGTGCGTGCCGTGTGT ATTGTGTTCTGTTCGAGAGTGGCTGGAGGGTGGTGGACGGCCTGAAACCGTTGCATGATG AGGAGAGATGCTTGGTAGTCCTGTGAGGTAAAAGAGGCAGTAACAAGGCTGGTGCCTGTG CCTTGTACCACTT