Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022242_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:7:173465917:173472209:-1 gene:Zm00001d022242 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLASMODESMATA CALLOSE-BINDING PROTEIN 5
Sequence

ATGTTCTGTGTGGCGAAACAGGGCGCGGACGCGACGGCGCTGCAGGCAGGGCTCAACTGG
GCGTGCGGGCAGGGCCGAGCGAACTGTGCGCCCATCCAGCCCGGCGGGCCGTGCTACAAG
CAGAACGACCTGGAGGCGCTAGCGTCCTACGCCTACAACGACTACTACCAGAAGAACTTT
GCTACCGGCGGCTCCTGCGGCTTCAACGGCACAGCTACGACCACCACCAGTGATCCCAGC
TCGGGGCAGTGCGTCTTCACAGGAAGCTCCATGGCAGGAGGCGGCACGCCGGCTGCGAGC
GCCCCCAGCGGCCTCTCCCCGCCGTCGTCGTTCACGCCGGGCATTGGGAGCCCCTCCAAC
ACCCTGATCCCTCTGGACGGCGCCGAGAGCCTGGTGTCCAGCGTCTGGTCGGCGATTTGC
GCCCCGCTGCTGGCGTTGCCGCTCTTCTTCCTCTGA

Peptide Sequence

PEP ID

Zm00001d022242_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:7:173465917:173472209:-1 gene:Zm00001d022242 transcript:Zm00001d022242_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLASMODESMATA CALLOSE-BINDING PROTEIN 5
Sequence

MFCVAKQGADATALQAGLNWACGQGRANCAPIQPGGPCYKQNDLEALASYAYNDYYQKNF
ATGGSCGFNGTATTTTSDPSSGQCVFTGSSMAGGGTPAASAPSGLSPPSSFTPGIGSPSN
TLIPLDGAESLVSSVWSAICAPLLALPLFFL

Transcript Sequence

Transcript ID

Zm00001d022242_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:173465917:173472209:-1 gene:Zm00001d022242 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLASMODESMATA CALLOSE-BINDING PROTEIN 5
Sequence

ACCACAAAAGGCGGTGCTGCTTTTTGTGGCTGTGGGTGGGTTTACGCTGCAACTATGTGA
AGCTCGGAGAATATCACTTTCATGTATACATCAGTGAAAATGCTCTTTGTTTGTGCGGAT
CCAGTAGTACTTTGTTTTGCCTTTTTGCTTGAGCAAGTGTAGTTCACCGCCACTTATTTG
CCAGTAAAGATGTACGTGGAGCCTGCATGAGGGCAGCCGTGCTGAAACTGCCGTCGATCT
GGGTCCAGACTCGGAGGACGGCAGCAAGAGGAGGTCGCTGGCCACCACCATGTTCTGTGT
GGCGAAACAGGGCGCGGACGCGACGGCGCTGCAGGCAGGGCTCAACTGGGCGTGCGGGCA
GGGCCGAGCGAACTGTGCGCCCATCCAGCCCGGCGGGCCGTGCTACAAGCAGAACGACCT
GGAGGCGCTAGCGTCCTACGCCTACAACGACTACTACCAGAAGAACTTTGCTACCGGCGG
CTCCTGCGGCTTCAACGGCACAGCTACGACCACCACCAGTGATCCCAGCTCGGGGCAGTG
CGTCTTCACAGGAAGCTCCATGGCAGGAGGCGGCACGCCGGCTGCGAGCGCCCCCAGCGG
CCTCTCCCCGCCGTCGTCGTTCACGCCGGGCATTGGGAGCCCCTCCAACACCCTGATCCC
TCTGGACGGCGCCGAGAGCCTGGTGTCCAGCGTCTGGTCGGCGATTTGCGCCCCGCTGCT
GGCGTTGCCGCTCTTCTTCCTCTGACCACCAGCGGCGGCAGATGAGTGGCCGGTGCTTGC
TAGTAGAGCGCTTATTATGTTTTTTTGTTCTTGTTCCTGGGTAGATCGCTCTCGTGTGGC
GGTGTTGATGTACATGTCAGAGTCGTGTTGGATGCGCTGGGATGGGAGATTACATAAGAT
GCTACAGAGATCTATTCATACGTAGAAAGTGGACCGGACTCCACCGTGTTTCCGTGTGTT
CTGG