Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d022240_T013
CDS Infomation	cds chromosome:B73_RefGen_v4:7:173412076:173421144:-1 gene:Zm00001d022240 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase family protein
Sequence	ATGCGAGGCCGCCACCTCCTAAAACCCATGCCCGTCCTCCTCAACACTACCCCTTCCCGG CTCCCCGCCGCCCACTTCCGCGTCCGTGACGCAGCCCGCCCGCCCGCGCCGCTGGCAGAG CCCGACGTCGGCATCTCTCGCTTCGCCTCCTCCATCCCGGGCTTCCGCGGCGCGCTGAAG CAGCGCTACTCCGACTTCATCGTCCACGAGGTCGCCTGCGACGGCGCCCTCGTCCGCCTC ACTTCCTTCGATCTCCCCGACATCGAGGAGAGTGGAGATAATGCGGAGGACGGTGATTCC GACGCCACCGCGGATCCATCGCGGGCGCTCGAGTCGTTCCGGCTGCTCTGCGGCGAAGCG GATTACCACGCCTTGAGGGGATTCCTGGAGAGGGTTTCGGAGGGAGGTGATGGTTATTTG TCGCCAATCATTCTGTCAGCTGATGCAGATAAGGCACATCGATCCGAGGTGCACGAGTTC ATCAAGAGGAATTTCAAGTTCCTGAACACGGATACAGTTGAGCACAATGATGGTATTCAG AAATGCATTAGGGTGCGCTTGGGTTCAGGGCCACGCTGTGGTAGGGGAAGGAACAGGAGA GGCATGGACACTTCAGGCTGGAGAGATGACAAGCCGTTTGACAGTAGAGGCTCTACATTC TGGCCTTATCACCTGGGGAAGTTCCTGAGGTTTCACCTTTATAAGGAGAACAAGGACACG CATGAGGCACTAGGGGTTATAGGAAAATTGGCAGGGGTTCAGCCAAGATCGTTTGGATTT GCAGGGACAAAGGATAAACGTGCTGTTACAACCCAACAGGTGACAGTTTTTAAAGTGCAT GCTAGCAGGCTGGCTGCTCTTAATAGCAAACTCACAGGTATCAGAGTTGGAGACTTTAGT TACGTGAAGGAGGGCCTTGCTCTTGGTCGACTCAGAGGGAACCACTTTGCAATTACTTTG AGGAATGTTATTGCAGAATCGGCCGATGATATAAATGCTGCAGTTAATGGTCTAAGTAAA AATGGATTTATCAATTACTATGGCTTACAGCGCTTTGGCAGCGGTTCTGTACCTACCCAC TTTGTTGGTGCTGCTTTGCTCAGAGGAGAATGGAGACATGCTGTTAGCTTGATTCTTGGT ACAAGGGTACATTATAAATGGCATGTTGATGTTGATGCAGCACTTAGGGGCATGCCCCGA CATCTCACAGTGGAGAGAGCTATTCTTCAGAGATTGAAGAACTACCCTGGCAACTATCTA CAAGCACTAATGGCTATACCTAAAGCACTGAGGCTGATGTATGTACATAGCTACCAGAGT TACTTATGGAATCATGCTGCAAGTATGAGAGTGGAAAAGTATGGTATTTCACAAGTTGTA GAAGGTGACTTAGTTTACAAAACTGGGTCCTCCCTTGGAGAAGCAATTACCACAGATACA TTTGATGACGATGATAGCCACGTTAATTCACCTGAAATGGAAATGTCTTGTGAAACACTT ACTGAAGAAATGATCCAATCTGTGAAGGTAGTTGATTCTGAAGATTTATTGAAGGCAGTC TATTCGTTTGAGGATGTTGTTCTCCCTTTGCCTGGGTCAGAAACATTGTTTCCTGGGAAT GAAGTTACTATGATTTATCATGAAATAGCCAAGAAGGATGGCATTAGCCTGATAGAGAGC GCCCATGGTATCAAGGACTTCTCGATTACAAGCATGAAAGGAGGTTACCGCCGCGTACTC CAACGCCCTATTGATTTTGAATGGGACCTGATGACTTACACAGATGACAATACACCTTTA GTACCAACTGATTTAGATGTTCTATCAGAAACCCAGTTATCAGAAACAAATGAGCCATTA TCTGATGGGACTTGCAGTTGTCCATCAAGTGATTCCAGGTTGCAAGTTTTATTGGACACC TCTGGACCAACCATTGAAGCTAGCTCAGTAGAAACCAAATCAATTGGCATCTCAGATCTG TCACCAGAGAAACTGGCTGTGAAATTAGAATTTACTCTACCAGCATCATCTTATGCTACA ATGGCCATAAGGGAGTTGACGAAAACTTCAACTTCGGTGACTTCCTGTTCAATTCTTTTT TTTGGTTTTGTAAATACTTAA

Peptide Sequence

PEP ID	Zm00001d022240_P013
PEP Infomation	pep chromosome:B73_RefGen_v4:7:173412076:173421144:-1 gene:Zm00001d022240 transcript:Zm00001d022240_T013 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase family protein
Sequence	MRGRHLLKPMPVLLNTTPSRLPAAHFRVRDAARPPAPLAEPDVGISRFASSIPGFRGALK QRYSDFIVHEVACDGALVRLTSFDLPDIEESGDNAEDGDSDATADPSRALESFRLLCGEA DYHALRGFLERVSEGGDGYLSPIILSADADKAHRSEVHEFIKRNFKFLNTDTVEHNDGIQ KCIRVRLGSGPRCGRGRNRRGMDTSGWRDDKPFDSRGSTFWPYHLGKFLRFHLYKENKDT HEALGVIGKLAGVQPRSFGFAGTKDKRAVTTQQVTVFKVHASRLAALNSKLTGIRVGDFS YVKEGLALGRLRGNHFAITLRNVIAESADDINAAVNGLSKNGFINYYGLQRFGSGSVPTH FVGAALLRGEWRHAVSLILGTRVHYKWHVDVDAALRGMPRHLTVERAILQRLKNYPGNYL QALMAIPKALRLMYVHSYQSYLWNHAASMRVEKYGISQVVEGDLVYKTGSSLGEAITTDT FDDDDSHVNSPEMEMSCETLTEEMIQSVKVVDSEDLLKAVYSFEDVVLPLPGSETLFPGN EVTMIYHEIAKKDGISLIESAHGIKDFSITSMKGGYRRVLQRPIDFEWDLMTYTDDNTPL VPTDLDVLSETQLSETNEPLSDGTCSCPSSDSRLQVLLDTSGPTIEASSVETKSIGISDL SPEKLAVKLEFTLPASSYATMAIRELTKTSTSVTSCSILFFGFVNT

Transcript Sequence

Transcript ID	Zm00001d022240_T013
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:173412076:173421144:-1 gene:Zm00001d022240 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pseudouridine synthase family protein
Sequence	AGCGGACAGCCGATTGCTTCCCCGAATCTCTTCCCCCAATCCGGCGCCCGGCAGAATGCG AGGCCGCCACCTCCTAAAACCCATGCCCGTCCTCCTCAACACTACCCCTTCCCGGCTCCC CGCCGCCCACTTCCGCGTCCGTGACGCAGCCCGCCCGCCCGCGCCGCTGGCAGAGCCCGA CGTCGGCATCTCTCGCTTCGCCTCCTCCATCCCGGGCTTCCGCGGCGCGCTGAAGCAGCG CTACTCCGACTTCATCGTCCACGAGGTCGCCTGCGACGGCGCCCTCGTCCGCCTCACTTC CTTCGATCTCCCCGACATCGAGGAGAGTGGAGATAATGCGGAGGACGGTGATTCCGACGC CACCGCGGATCCATCGCGGGCGCTCGAGTCGTTCCGGCTGCTCTGCGGCGAAGCGGATTA CCACGCCTTGAGGGGATTCCTGGAGAGGGTTTCGGAGGGAGGTGATGGTTATTTGTCGCC AATCATTCTGTCAGCTGATGCAGATAAGGCACATCGATCCGAGGTGCACGAGTTCATCAA GAGGAATTTCAAGTTCCTGAACACGGATACAGTTGAGCACAATGATGGTATTCAGAAATG CATTAGGGTGCGCTTGGGTTCAGGGCCACGCTGTGGTAGGGGAAGGAACAGGAGAGGCAT GGACACTTCAGGCTGGAGAGATGACAAGCCGTTTGACAGTAGAGGCTCTACATTCTGGCC TTATCACCTGGGGAAGTTCCTGAGGTTTCACCTTTATAAGGAGAACAAGGACACGCATGA GGCACTAGGGGTTATAGGAAAATTGGCAGGGGTTCAGCCAAGATCGTTTGGATTTGCAGG GACAAAGGATAAACGTGCTGTTACAACCCAACAGGTGACAGTTTTTAAAGTGCATGCTAG CAGGCTGGCTGCTCTTAATAGCAAACTCACAGGTATCAGAGTTGGAGACTTTAGTTACGT GAAGGAGGGCCTTGCTCTTGGTCGACTCAGAGGGAACCACTTTGCAATTACTTTGAGGAA TGTTATTGCAGAATCGGCCGATGATATAAATGCTGCAGTTAATGGTCTAAGTAAAAATGG ATTTATCAATTACTATGGCTTACAGCGCTTTGGCAGCGGTTCTGTACCTACCCACTTTGT TGGTGCTGCTTTGCTCAGAGGAGAATGGAGACATGCTGTTAGCTTGATTCTTGGTACAAG GGTACATTATAAATGGCATGTTGATGTTGATGCAGCACTTAGGGGCATGCCCCGACATCT CACAGTGGAGAGAGCTATTCTTCAGAGATTGAAGAACTACCCTGGCAACTATCTACAAGC ACTAATGGCTATACCTAAAGCACTGAGGCTGATGTATGTACATAGCTACCAGAGTTACTT ATGGAATCATGCTGCAAGTATGAGAGTGGAAAAGTATGGTATTTCACAAGTTGTAGAAGG TGACTTAGTTTACAAAACTGGGTCCTCCCTTGGAGAAGCAATTACCACAGATACATTTGA TGACGATGATAGCCACGTTAATTCACCTGAAATGGAAATGTCTTGTGAAACACTTACTGA AGAAATGATCCAATCTGTGAAGGTAGTTGATTCTGAAGATTTATTGAAGGCAGTCTATTC GTTTGAGGATGTTGTTCTCCCTTTGCCTGGGTCAGAAACATTGTTTCCTGGGAATGAAGT TACTATGATTTATCATGAAATAGCCAAGAAGGATGGCATTAGCCTGATAGAGAGCGCCCA TGGTATCAAGGACTTCTCGATTACAAGCATGAAAGGAGGTTACCGCCGCGTACTCCAACG CCCTATTGATTTTGAATGGGACCTGATGACTTACACAGATGACAATACACCTTTAGTACC AACTGATTTAGATGTTCTATCAGAAACCCAGTTATCAGAAACAAATGAGCCATTATCTGA TGGGACTTGCAGTTGTCCATCAAGTGATTCCAGGTTGCAAGTTTTATTGGACACCTCTGG ACCAACCATTGAAGCTAGCTCAGTAGAAACCAAATCAATTGGCATCTCAGATCTGTCACC AGAGAAACTGGCTGTGAAATTAGAATTTACTCTACCAGCATCATCTTATGCTACAATGGC CATAAGGGAGTTGACGAAAACTTCAACTTCGGTGACTTCCTGTTCAATTCTTTTTTTTGG TTTTGTAAATACTTAAATTATCTTTGCTACTCTTTTTTTTCATCTTTTGGTCATTGAACC GAACCATTTGAGCTCCACCACGATCACATAATTTTCTTTAGGGCATCTCACTCAATGGTT TCTCTTTGACAGACTATTATCGTACAAAACAATGTATTCAGTTTGCACT